Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13522 Avicennia marina HOM05D007913 ORTHO05D009599 3.0e-60 235.0 118 100.0
MSTRG.13524 Avicennia marina HOM05D007913 ORTHO05D009599 1.7e-26 122.9 117 59.8
MSTRG.13525 Avicennia marina HOM05D007913 ORTHO05D009599 3.3e-22 108.6 80 66.2
MSTRG.2241 Avicennia marina HOM05D007913 ORTHO05D009599 7.6e-19 97.4 119 50.4
MSTRG.2240 Avicennia marina HOM05D007913 ORTHO05D009599 1.1e-17 93.6 117 49.6
Migut.E00331 Erythranthe guttata HOM05D007913 ORTHO05D009599 2.4e-17 92.4 117 53.0
Oeu009783.1 Olea europaea HOM05D007913 ORTHO05D009599 6.0e-16 87.8 113 53.1
Migut.E00332 Erythranthe guttata HOM05D007913 ORTHO05D009599 1.8e-15 86.3 113 48.7
Actinidia14885 Actinidia chinensis HOM05D007913 ORTHO05D009599 5.1e-15 84.7 110 51.8
PGSC0003DMG400014558 Solanum tuberosum HOM05D007913 ORTHO05D009599 6.7e-15 84.3 110 47.3
Oeu027679.1 Olea europaea HOM05D007913 ORTHO05D009599 1.1e-14 83.6 114 46.5
Oeu027681.1 Olea europaea HOM05D007913 ORTHO05D009599 1.1e-14 83.6 114 46.5
Thecc.02G356200 Theobroma cacao HOM05D007913 ORTHO05D009599 3.3e-14 82.0 107 51.4
MSTRG.13523 Avicennia marina HOM05D007913 ORTHO05D009599 7.4e-14 80.9 114 46.5
COL.COLO4_07914 Corchorus olitorius HOM05D007913 ORTHO05D009599 9.6e-14 80.5 114 45.6
Dinv04476 Davidia involucrata HOM05D007913 ORTHO05D009599 3.7e-13 78.6 104 52.9
Cc00_g12370 Coffea canephora HOM05D007913 ORTHO05D009599 8.1e-13 77.4 104 46.2
Sopen05g005290 Solanum pennellii HOM05D007913 ORTHO05D009599 8.1e-13 77.4 107 45.8
Oeu039264.1 Olea europaea HOM05D007913 ORTHO05D009599 2.4e-12 75.9 120 47.5
MSTRG.13526 Avicennia marina HOM05D007913 ORTHO05D009599 1.5e-11 73.2 108 46.3
MSTRG.832 Avicennia marina HOM05D007913 ORTHO05D009599 2.6e-11 72.4 108 47.2
Rhsim09G0108800 Rhododendron simsii HOM05D007913 ORTHO05D009599 3.4e-11 72.0 117 45.3
TAR629G2111 Trochodendron aralioides HOM05D007913 ORTHO05D009599 3.4e-11 72.0 111 44.1
Nitab4.5_0000874g0170 Nicotiana tabacum HOM05D007913 ORTHO05D009599 4.5e-11 71.6 110 42.7
Nitab4.5_0000057g0320 Nicotiana tabacum HOM05D007913 ORTHO05D009599 7.6e-11 70.9 115 43.5
Rhsim09G0108600 Rhododendron simsii HOM05D007913 ORTHO05D009599 7.6e-11 70.9 123 43.9
Nitab4.5_0003330g0030 Nicotiana tabacum HOM05D007913 ORTHO05D009599 3.8e-10 68.6 118 40.7
SalBow8G2445 Salvia bowleyana HOM05D007913 ORTHO05D009599 4.9e-10 68.2 78 52.6
Manes.14G101600 Manihot esculenta HOM05D007913 ORTHO05D009599 3.2e-09 65.5 96 50.0
Nitab4.5_0006400g0040 Nicotiana tabacum HOM05D007913 ORTHO05D009599 5.5e-09 64.7 91 44.0
Potri.010G125900 Populus trichocarpa HOM05D007913 ORTHO05D009599 9.3e-09 63.9 116 43.1
vmacro23289 Vaccinium macrocarpon HOM05D007913 ORTHO05D009599 9.3e-09 63.9 125 41.6
Hma1.2p1_0061F.1_g034050 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 1.2e-08 63.5 105 44.8
Atru.chr11.1276 Acer truncatum HOM05D007913 ORTHO05D009599 2.7e-08 62.4 115 39.1
Prupe.1G309800 Prunus persica HOM05D007913 ORTHO05D009599 2.7e-08 62.4 111 45.0
Nitab4.5_0000874g0150 Nicotiana tabacum HOM05D007913 ORTHO05D009599 3.5e-08 62.0 110 36.4
TAR371G0046 Trochodendron aralioides HOM05D007913 ORTHO05D009599 6.0e-08 61.2 109 38.5
TAR374G0796 Trochodendron aralioides HOM05D007913 ORTHO05D009599 7.9e-08 60.8 106 38.7
Ciclev10033073m.g Citrus clementina HOM05D007913 ORTHO05D009599 1.3e-07 60.1 125 36.8
Peaxi162Scf00382g00033 Petunia axillaris HOM05D007913 ORTHO05D009599 1.8e-07 59.7 102 41.2
Nn4g23816 Nelumbo nucifera HOM05D007913 ORTHO05D009599 3.9e-07 58.5 119 37.0
Dinv21098 Davidia involucrata HOM05D007913 ORTHO05D009599 6.7e-07 57.8 116 39.7
FvH4_4g27520 Fragaria vesca HOM05D007913 ORTHO05D009599 6.7e-07 57.8 104 47.1
FAN12G2484 Fragaria x ananassa HOM05D007913 ORTHO05D009599 6.7e-07 57.8 104 47.1
FAN12G3451 Fragaria x ananassa HOM05D007913 ORTHO05D009599 6.7e-07 57.8 104 47.1
FAN22G1199 Fragaria x ananassa HOM05D007913 ORTHO05D009599 6.7e-07 57.8 104 47.1
Peaxi162Scf00382g00026 Petunia axillaris HOM05D007913 ORTHO05D009599 8.7e-07 57.4 112 40.2
FAN07G1066 Fragaria x ananassa HOM05D007913 ORTHO05D009599 1.1e-06 57.0 104 46.2
RcHm_v2.0_Chr4g0435331 Rosa chinensis HOM05D007913 ORTHO05D009599 1.5e-06 56.6 103 35.9
RcHm_v2.0_Chr4g0435341 Rosa chinensis HOM05D007913 ORTHO05D009599 1.5e-06 56.6 110 42.7
MBI10_g16032_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 2.5e-06 55.8 82 42.7
QL10p025104 Quercus lobata HOM05D013982 ORTHO05D012395 3.3e-06 55.5 99 37.4


User provided reference genes

Program Settings