Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 7.6e-147 523.9 272 100.0
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 1.0e-111 407.1 273 78.4
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 2.3e-111 406.0 270 79.3
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 8.5e-106 387.5 223 85.7
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 1.8e-100 369.8 281 74.0
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 3.1e-100 369.0 282 70.6
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 1.6e-96 356.7 282 68.1
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 2.1e-96 356.3 284 67.6
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.8e-95 353.2 276 70.3
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 5.1e-95 351.7 279 66.7
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 6.7e-95 351.3 274 68.2
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 8.8e-95 350.9 295 66.1
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 1.1e-94 350.5 287 65.5
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 1.5e-94 350.1 302 67.2
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.3e-93 347.1 283 66.4
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 1.3e-93 347.1 343 61.2
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 1.3e-93 347.1 275 68.7
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 1.7e-93 346.7 291 66.3
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 1.7e-93 346.7 291 66.3
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 2.8e-93 345.9 279 66.7
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 1.1e-92 344.0 291 64.9
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 1.4e-92 343.6 278 66.5
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 2.4e-92 342.8 290 66.9
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 3.1e-92 342.4 270 68.9
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 4.1e-92 342.0 284 65.1
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 5.3e-92 341.7 292 65.4
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 7.0e-92 341.3 291 64.3
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 7.0e-92 341.3 287 66.2
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 9.1e-92 340.9 277 67.9
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 1.2e-91 340.5 282 67.0
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 1.2e-91 340.5 291 64.9
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 1.6e-91 340.1 276 67.0
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 1.6e-91 340.1 290 65.2
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 2.0e-91 339.7 279 66.7
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 2.6e-91 339.3 310 62.6
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 3.5e-91 339.0 277 66.1
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 1.7e-90 336.7 278 67.3
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 2.9e-90 335.9 281 65.8
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 2.9e-90 335.9 280 66.1
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 3.8e-90 335.5 281 65.8
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 3.8e-90 335.5 279 65.2
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 5.0e-90 335.1 307 64.2
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 6.5e-90 334.7 287 64.1
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 7.2e-89 331.3 281 65.1
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 2.7e-88 329.3 277 66.4
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 4.7e-88 328.6 312 59.0
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 4.0e-87 325.5 284 63.0
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 5.2e-87 325.1 205 81.0
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 6.7e-87 324.7 276 64.1
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 8.8e-87 324.3 276 64.9
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 1.5e-86 323.6 282 63.5
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 1.5e-86 323.6 271 64.6
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 2.0e-86 323.2 277 64.6
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 7.5e-86 321.2 275 63.6
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 7.5e-86 321.2 270 63.7
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 2.2e-85 319.7 292 62.3
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 6.3e-85 318.2 278 63.7
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 8.2e-85 317.8 195 80.5
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 1.8e-84 316.6 275 65.1
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 7.0e-84 314.7 199 78.9
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 9.1e-84 314.3 278 64.0
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 4.5e-83 312.0 287 61.0
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 5.9e-83 311.6 301 60.5
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 2.9e-82 309.3 280 63.6
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 6.5e-82 308.1 275 59.6
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 9.4e-81 304.3 361 50.4
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 2.1e-80 303.1 298 61.4
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 2.1e-80 303.1 195 76.9
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 8.0e-80 301.2 279 61.6
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 1.0e-79 300.8 202 73.8
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 3.0e-79 299.3 286 61.2
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 5.2e-79 298.5 195 74.9
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 2.6e-78 296.2 283 59.0
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 5.7e-78 295.0 289 57.4
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 2.8e-77 292.7 302 57.3
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 4.8e-77 292.0 410 46.8
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.8e-76 290.0 287 57.1
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 3.1e-76 289.3 283 58.7
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 4.1e-76 288.9 281 56.9
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 2.0e-75 286.6 195 72.8
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 4.5e-75 285.4 195 72.8
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 1.3e-74 283.9 281 58.7
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 2.5e-73 279.6 191 72.8
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 5.5e-73 278.5 326 50.3
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 5.5e-73 278.5 198 72.7
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 1.6e-72 276.9 211 67.3
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 6.1e-72 275.0 286 55.9
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 8.8e-71 271.2 275 56.7
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 2.6e-70 269.6 224 63.8
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 8.3e-69 264.6 198 65.2
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 2.4e-68 263.1 192 68.8
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 4.1e-68 262.3 198 65.7
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 3.8e-66 255.8 249 58.6
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 7.3e-65 251.5 150 80.7
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 4.0e-63 245.7 167 74.3
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 1.5e-62 243.8 220 58.2
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 3.5e-59 232.6 230 56.5
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 2.0e-54 216.9 278 50.4
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 3.4e-54 216.1 158 74.1
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.1e-49 201.1 133 80.5
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.5e-49 199.9 131 78.6
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 1.7e-45 187.2 207 52.2
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 2.2e-45 186.8 199 55.8
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 3.7e-45 186.0 239 46.0
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 3.7e-45 186.0 175 62.3
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 1.5e-41 174.1 108 81.5
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 2.2e-37 160.2 397 34.0
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 2.4e-31 140.2 135 57.0
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 2.9e-29 133.3 282 37.2
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 3.9e-26 122.9 221 41.2
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.4e-23 114.4 80 67.5
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 5.3e-23 112.5 96 62.5
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 5.8e-22 109.0 75 72.0
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 1.8e-18 97.4 69 69.6
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 1.3e-10 71.2 231 29.0
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 3.3e-09 66.6 57 57.9
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.6e-08 64.3 61 57.4
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 1.2e-06 58.2 38 71.1
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 4.5e-06 56.2 37 67.6
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 5.8e-06 55.8 41 63.4
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 5.8e-06 55.8 38 68.4


User provided reference genes

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