Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 5.4e-119 431.0 218 100.0
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 3.3e-84 315.5 217 78.8
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 3.1e-82 308.9 220 74.5
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 3.3e-76 288.9 216 71.8
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 2.8e-75 285.8 216 69.9
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 6.4e-64 248.1 220 62.3
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 1.4e-63 246.9 210 63.8
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 7.9e-62 241.1 222 61.3
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 1.0e-61 240.7 211 62.6
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 3.9e-61 238.8 211 61.6
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 5.6e-60 235.0 209 62.7
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 5.6e-60 235.0 229 57.6
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 3.5e-54 215.7 208 56.7
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 5.1e-53 211.8 209 55.0
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 1.9e-52 209.9 179 60.3
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 3.3e-52 209.1 212 57.1
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 2.4e-50 203.0 236 51.7
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 2.9e-48 196.1 213 54.5
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.4e-47 193.7 213 53.1
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 1.4e-47 193.7 211 52.6
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 9.3e-47 191.0 215 53.5
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 1.6e-46 190.3 212 52.4
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 1.6e-46 190.3 209 56.0
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 2.7e-46 189.5 211 53.6
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 3.5e-46 189.1 213 52.1
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 4.6e-46 188.7 216 54.2
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 7.9e-46 188.0 212 51.4
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 1.0e-45 187.6 209 51.7
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 5.1e-45 185.3 213 52.6
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 4.3e-44 182.2 209 52.2
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 5.7e-44 181.8 208 51.9
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 7.4e-44 181.4 211 51.7
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 1.3e-43 180.6 210 48.1
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 2.1e-43 179.9 231 47.6
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 3.7e-43 179.1 216 48.6
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 4.8e-43 178.7 210 50.0
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 6.3e-43 178.3 213 51.2
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 8.2e-43 177.9 218 50.5
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 1.4e-42 177.2 213 50.7
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 2.4e-42 176.4 218 50.0
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 4.1e-42 175.6 218 50.5
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 4.1e-42 175.6 218 48.6
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 5.3e-42 175.3 209 49.8
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 6.9e-42 174.9 213 49.8
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 6.9e-42 174.9 209 50.7
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 9.0e-42 174.5 209 49.8
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 2.0e-41 173.3 213 49.3
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 3.4e-41 172.6 209 50.7
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 4.5e-41 172.2 220 50.9
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 1.0e-40 171.0 214 50.0
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 1.3e-40 170.6 216 48.1
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 1.7e-40 170.2 212 47.6
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 2.2e-40 169.9 216 49.1
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 2.9e-40 169.5 218 47.2
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 3.8e-40 169.1 209 48.3
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 3.8e-40 169.1 267 44.6
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 5.0e-40 168.7 213 48.4
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 5.0e-40 168.7 209 49.8
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 1.1e-39 167.5 219 48.4
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 1.9e-39 166.8 213 43.2
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 3.2e-39 166.0 206 49.5
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 3.2e-39 166.0 215 44.2
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 3.2e-39 166.0 210 47.6
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 5.5e-39 165.2 215 44.2
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 5.5e-39 165.2 215 44.2
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 7.2e-39 164.9 242 46.7
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 3.6e-38 162.5 211 46.4
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 3.6e-38 162.5 207 47.8
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 3.9e-37 159.1 213 47.9
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 1.5e-36 157.1 213 42.3
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 2.5e-36 156.4 168 52.4
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 9.7e-36 154.5 220 40.9
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 1.3e-35 154.1 225 41.8
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 2.2e-35 153.3 156 51.9
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 2.2e-35 153.3 218 42.7
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 6.3e-35 151.8 214 41.6
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 1.8e-34 150.2 213 42.7
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 4.1e-34 149.1 213 43.2
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 4.1e-34 149.1 221 43.9
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 1.2e-33 147.5 213 42.7
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.2e-33 147.5 160 52.5
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 2.0e-33 146.7 220 45.5
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 4.5e-33 145.6 218 45.0
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 1.3e-32 144.1 210 45.2
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 2.2e-32 143.3 164 53.0
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 2.9e-32 142.9 162 49.4
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 1.1e-31 141.0 217 40.1
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 1.9e-31 140.2 184 44.6
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 3.2e-31 139.4 158 49.4
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 9.4e-31 137.9 215 41.4
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 7.9e-30 134.8 217 41.9
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 3.9e-29 132.5 157 45.2
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 3.9e-29 132.5 214 40.7
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 1.5e-25 120.6 124 52.4
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 2.0e-25 120.2 207 39.1
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 3.4e-25 119.4 118 55.1
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 1.9e-23 113.6 212 35.8
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 3.6e-22 109.4 117 50.4
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 3.6e-22 109.4 205 39.5
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 2.1e-14 83.6 117 45.3
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 1.0e-13 81.3 136 38.2
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 6.7e-13 78.6 89 50.6
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 5.7e-12 75.5 89 49.4


User provided reference genes

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