Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13306 Avicennia marina HOM05D006962 ORTHO05D008696 6.2e-118 427.6 228 100.0
Migut.E00010 Erythranthe guttata HOM05D006962 ORTHO05D008696 6.8e-32 141.7 211 48.8
Nitab4.5_0006369g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 2.2e-30 136.7 214 43.9
Solyc05g015640.3 Solanum lycopersicum HOM05D006962 ORTHO05D008696 6.3e-30 135.2 205 42.4
CSS0033119 Camellia sinensis var. sinensis HOM05D006962 ORTHO05D008696 1.8e-29 133.7 219 42.9
Sopen05g011100 Solanum pennellii HOM05D006962 ORTHO05D008696 3.2e-29 132.9 206 42.7
Nitab4.5_0000996g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 5.4e-29 132.1 212 42.9
PGSC0003DMG400034312 Solanum tuberosum HOM05D006962 ORTHO05D008696 9.2e-29 131.3 209 42.1
Cc11_g17050 Coffea canephora HOM05D006962 ORTHO05D008696 2.7e-28 129.8 224 42.9
Peaxi162Scf00128g01332 Petunia axillaris HOM05D006962 ORTHO05D008696 1.6e-25 120.6 221 36.2
CiPaw.05G108100 Carya illinoinensis HOM05D006962 ORTHO05D008696 4.0e-24 115.9 211 40.8
ClCG06G002190 Citrullus lanatus HOM05D006962 ORTHO05D008696 6.8e-24 115.2 198 42.9
Gohir.D04G183600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.5e-23 114.0 221 38.5
Gohir.A04G140400 Gossypium hirsutum HOM05D006962 ORTHO05D008696 2.6e-23 113.2 212 37.7
TWI75G0385 Tripterygium wilfordii HOM05D006962 ORTHO05D008696 2.6e-23 113.2 204 40.2
MELO3C022311.2 Cucumis melo HOM05D006962 ORTHO05D008696 1.3e-22 110.9 198 40.4
Gorai.012G176600 Gossypium raimondii HOM05D006962 ORTHO05D008696 1.3e-22 110.9 212 37.3
QL03p052240 Quercus lobata HOM05D006962 ORTHO05D008696 1.3e-22 110.9 218 39.0
SGA_v2.0_scaffold87G27164 Striga asiatica HOM05D006962 ORTHO05D008696 1.7e-22 110.5 220 40.5
Duzib251G0823 Durio zibethinus HOM05D006962 ORTHO05D008696 3.7e-22 109.4 203 40.9
Thecc.02G205200 Theobroma cacao HOM05D006962 ORTHO05D008696 4.9e-22 109.0 219 39.3
TAR629G1477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 8.3e-22 108.2 210 39.0
Cfa009377 Carpinus fangiana HOM05D006962 ORTHO05D008696 1.1e-21 107.8 212 40.1
GSVIVG01010505001 Vitis vinifera HOM05D006962 ORTHO05D008696 1.1e-21 107.8 209 40.7
ClCG07G015460 Citrullus lanatus HOM05D006962 ORTHO05D008696 3.2e-21 106.3 202 38.1
CsaV3_4G003050 Cucumis sativus L. HOM05D006962 ORTHO05D008696 4.1e-21 105.9 198 39.4
CANSAT01G0828 Cannabis sativa HOM05D006962 ORTHO05D008696 7.0e-21 105.1 216 38.9
COL.COLO4_20424 Corchorus olitorius HOM05D006962 ORTHO05D008696 1.2e-20 104.4 201 40.3
Ciclev10032798m.g Citrus clementina HOM05D006962 ORTHO05D008696 1.6e-20 104.0 205 36.6
Gohir.D02G147600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.6e-20 104.0 201 38.8
Medtr3g085060 Medicago truncatula HOM05D006962 ORTHO05D008696 2.7e-20 103.2 198 36.4
Eucgr.B03508 Eucalyptus grandis HOM05D006962 ORTHO05D008696 3.5e-20 102.8 227 37.0
Sabra01G0041700 Salix brachista HOM05D000660 ORTHO05D000766 3.5e-20 102.8 187 41.7
Nn3g16434 Nelumbo nucifera HOM05D006962 ORTHO05D008696 6.0e-20 102.1 221 35.3
CsaV3_6G008260 Cucumis sativus L. HOM05D006962 ORTHO05D008696 7.8e-20 101.7 193 38.3
Dinv17575 Davidia involucrata HOM05D006962 ORTHO05D008696 7.8e-20 101.7 215 36.7
HanXRQChr08g0214941 Helianthus annuus HOM05D006962 ORTHO05D008696 7.8e-20 101.7 143 42.0
VMungo1383G1469 Vigna mungo HOM05D006962 ORTHO05D008696 1.0e-19 101.3 192 39.1
Cpa.g.sc43.75 Carica papaya HOM05D006962 ORTHO05D008696 1.3e-19 100.9 182 39.0
Haze_12436 Corylus avellana HOM05D006962 ORTHO05D008696 1.7e-19 100.5 183 40.4
Potri.003G170700 Populus trichocarpa HOM05D006962 ORTHO05D008696 1.7e-19 100.5 202 37.6
Manes.13G010300 Manihot esculenta HOM05D006962 ORTHO05D008696 3.0e-19 99.8 194 41.2
Prupe.1G224100 Prunus persica HOM05D006962 ORTHO05D008696 3.9e-19 99.4 213 38.0
PGR102G1052 Punica granatum HOM05D006962 ORTHO05D008696 3.9e-19 99.4 173 42.8
MELO3C032628.2 Cucumis melo HOM05D006962 ORTHO05D008696 8.6e-19 98.2 151 40.4
Glyma.18G005200 Glycine max HOM05D006962 ORTHO05D008696 8.6e-19 98.2 188 37.2
AUR62005637 Chenopodium quinoa HOM05D006962 ORTHO05D008696 1.1e-18 97.8 165 40.6
Gorai.005G165400 Gossypium raimondii HOM05D006962 ORTHO05D008696 1.1e-18 97.8 198 37.9
arahy.Tifrunner.gnm1.ann1.AWLH2F Arachis hypogaea HOM05D006962 ORTHO05D008696 1.9e-18 97.1 214 34.1
Gohir.A03G124600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.9e-18 97.1 198 37.9
Potri.001G057700 Populus trichocarpa HOM05D006962 ORTHO05D008696 2.5e-18 96.7 182 39.6
Sc14g0009120 Simmondsia chinensis HOM05D006962 ORTHO05D008696 2.5e-18 96.7 203 39.4
PSO017G7099 Papaver somniferum HOM05D006962 ORTHO05D008696 4.3e-18 95.9 164 37.8
AUR62028912 Chenopodium quinoa HOM05D006962 ORTHO05D008696 7.3e-18 95.1 162 38.9
PSO478G2808 Papaver somniferum HOM05D006962 ORTHO05D008696 7.3e-18 95.1 166 38.0
THA.LOC104807506 Tarenaya hassleriana HOM05D006962 ORTHO05D008696 7.3e-18 95.1 226 37.6
BolC5t31319H Brassica oleracea HOM05D006962 ORTHO05D008696 1.2e-17 94.4 211 35.5
Ca_16448_v3 Cicer arietinum L. HOM05D006962 ORTHO05D008696 1.2e-17 94.4 214 37.4
Phvul.001G262900 Phaseolus vulgaris HOM05D006962 ORTHO05D008696 1.6e-17 94.0 199 36.7
Lsat_1_v5_gn_4_641 Lactuca sativa HOM05D006962 ORTHO05D008696 2.8e-17 93.2 197 36.0
C05p26000 Brassica napus HOM05D006962 ORTHO05D008696 3.6e-17 92.8 211 35.1
MBI07_g28246_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 3.6e-17 92.8 202 36.1
Ah.03g136040 Amaranthus hybridus HOM05D006962 ORTHO05D008696 4.7e-17 92.4 189 34.9
MBI07_g11269_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 8.1e-17 91.7 198 35.4
BcaC05g26545 Brassica carinata HOM05D006962 ORTHO05D008696 1.1e-16 91.3 211 34.6
ECA234G1956 Erigeron canadensis HOM05D006962 ORTHO05D008696 1.1e-16 91.3 145 42.8
FvH4_4g23570 Fragaria vesca HOM05D006962 ORTHO05D008696 1.1e-16 91.3 198 37.4
TAR636G2109 Trochodendron aralioides HOM05D006962 ORTHO05D008696 1.1e-16 91.3 221 36.7
Sabra03G0124800 Salix brachista HOM05D006962 ORTHO05D008696 1.8e-16 90.5 202 36.1
AL1G40700 Arabidopsis lyrata HOM05D006962 ORTHO05D008696 3.1e-16 89.7 158 38.6
Lj6g0020338 Lotus japonicus HOM05D006962 ORTHO05D008696 4.0e-16 89.4 204 33.3
MD16G1121100 Malus domestica HOM05D006962 ORTHO05D008696 4.0e-16 89.4 199 32.7
RcHm_v2.0_Chr4g0429971 Rosa chinensis HOM05D006962 ORTHO05D008696 5.2e-16 89.0 195 36.9
Aqoxy3G01577 Aquilegia oxysepala HOM05D006962 ORTHO05D008696 6.8e-16 88.6 194 39.2
C07p17910 Brassica napus HOM05D006962 ORTHO05D008696 6.8e-16 88.6 218 33.0
DCAR_007000 Daucus carota HOM05D006962 ORTHO05D008696 6.8e-16 88.6 158 37.3
A09p38640 Brassica napus HOM05D006962 ORTHO05D008696 8.9e-16 88.2 164 37.8
BraA09t39370Z Brassica rapa HOM05D006962 ORTHO05D008696 8.9e-16 88.2 164 37.8
Thhalv10008828m.g Eutrema salsugineum HOM05D006962 ORTHO05D008696 1.2e-15 87.8 208 32.2
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 2.0e-15 87.0 155 38.1
BcaNung06812 Brassica carinata HOM05D006962 ORTHO05D008696 2.6e-15 86.7 214 33.6
TPR.G17769 Trifolium pratense HOM05D006962 ORTHO05D008696 2.6e-15 86.7 209 31.6
BcaC05g26736 Brassica carinata HOM05D006962 ORTHO05D008696 3.4e-15 86.3 216 34.3
Psat5g097440 Pisum sativum HOM05D006962 ORTHO05D008696 4.4e-15 85.9 203 34.5
Sed0011154 Sechium edule HOM05D006962 ORTHO05D008696 4.4e-15 85.9 136 40.4
BolC7t42297H Brassica oleracea HOM05D006962 ORTHO05D008696 7.5e-15 85.1 218 32.6
Hma1.2p1_0657F.1_g197165 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 9.8e-15 84.7 100 48.0
Hma1.2p1_0967F.1_g242360 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 9.8e-15 84.7 100 48.0
CDE05G3434 Ceratophyllum demersum HOM05D006962 ORTHO05D008696 2.2e-14 83.6 209 31.1
ATR0561G196 Amborella trichopoda HOM05D006962 ORTHO05D008696 3.7e-14 82.8 146 39.7
Lalb_Chr23g0278151 Lupinus albus HOM05D006962 ORTHO05D008696 4.9e-14 82.4 144 37.5
Rhsim12G0024900 Rhododendron simsii HOM05D006962 ORTHO05D008696 4.9e-14 82.4 215 34.0
Atru.chr11.2343 Acer truncatum HOM05D006962 ORTHO05D008696 1.4e-13 80.9 95 45.3
Sp1g23540 Schrenkiella parvula HOM05D006962 ORTHO05D008696 3.2e-13 79.7 167 36.5
Actinidia08062 Actinidia chinensis HOM05D006962 ORTHO05D008696 5.4e-13 79.0 155 41.9
Hund25473 Selenicereus undatus HOM05D006962 ORTHO05D008696 7.1e-13 78.6 203 30.5
Aa31LG7G9900 Aethionema arabicum HOM05D006962 ORTHO05D008696 1.6e-12 77.4 155 34.8
HPP92_023534 Vanilla planifolia HOM05D006962 ORTHO05D008696 1.6e-12 77.4 178 36.5
CARHR026870 Cardamine hirsuta HOM05D006962 ORTHO05D008696 2.1e-12 77.0 218 31.7
Glyma.11G251800 Glycine max HOM05D006962 ORTHO05D008696 1.0e-11 74.7 154 37.7
TAR629G0477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 2.3e-11 73.6 70 57.1
Zm00001eb180910 Zea mays HOM05D006962 ORTHO05D008696 2.3e-11 73.6 193 31.1
A07p11980 Brassica napus HOM05D006962 ORTHO05D008696 3.0e-11 73.2 217 30.0
Zm00001eb241800 Zea mays HOM05D006962 ORTHO05D008696 3.0e-11 73.2 215 31.6
BcaB03g14005 Brassica carinata HOM05D006962 ORTHO05D008696 3.9e-11 72.8 214 30.4
Gohir.D03G043133 Gossypium hirsutum HOM05D006962 ORTHO05D008696 3.9e-11 72.8 121 38.0
Carub.0001s2583 Capsella rubella HOM05D006962 ORTHO05D008696 8.6e-11 71.6 214 32.2
BraA07t28983Z Brassica rapa HOM05D006962 ORTHO05D008696 4.3e-10 69.3 164 32.9
Os02g0509600 Oryza sativa ssp. japonica HOM05D006962 ORTHO05D008696 5.6e-10 68.9 202 32.2
Gorai.003G044100 Gossypium raimondii HOM05D006962 ORTHO05D008696 1.2e-09 67.8 121 38.0
Sed0003747 Sechium edule HOM05D006962 ORTHO05D008696 8.9e-08 61.6 200 33.0
AT1G27300 Arabidopsis thaliana HOM05D006962 ORTHO05D008696 1.2e-07 61.2 164 33.5
SMO141G0097 Selaginella moellendorffii HOM05D002663 ORTHO05D021316 1.5e-07 60.8 107 31.8


User provided reference genes

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