Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1327 Avicennia marina HOM05D006792 ORTHO05D008489 3.8e-84 314.7 148 100.0
Migut.C00611 Erythranthe guttata HOM05D006792 ORTHO05D008489 8.8e-57 223.8 152 72.4
SGA_v2.0_scaffold217G42431 Striga asiatica HOM05D006792 ORTHO05D008489 1.7e-52 209.5 151 68.9
Oeu040900.1 Olea europaea HOM05D006792 ORTHO05D008489 2.2e-52 209.1 148 68.9
CSS0036769 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 1.9e-51 206.1 158 64.6
CSS0036679 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 7.2e-51 204.1 158 63.9
SGA_v2.0_scaffold127G34009 Striga asiatica HOM05D006792 ORTHO05D008489 2.7e-50 202.2 151 67.5
CiPaw.15G064100 Carya illinoinensis HOM05D006792 ORTHO05D008489 8.0e-50 200.7 157 65.0
SalBow6G5080 Salvia bowleyana HOM05D006792 ORTHO05D008489 1.4e-49 199.9 143 69.2
SalBow1G1949 Salvia bowleyana HOM05D006792 ORTHO05D008489 2.3e-49 199.1 143 68.5
Dinv35992 Davidia involucrata HOM05D006792 ORTHO05D008489 4.4e-48 194.9 156 62.8
FAN15G1697 Fragaria x ananassa HOM05D006792 ORTHO05D008489 7.5e-48 194.1 154 62.3
FvH4_2g40760 Fragaria vesca HOM05D006792 ORTHO05D008489 2.2e-47 192.6 157 62.4
PSO170G4587 Papaver somniferum HOM05D006792 ORTHO05D008489 2.8e-47 192.2 158 62.0
Cfa018502 Carpinus fangiana HOM05D006792 ORTHO05D008489 3.7e-47 191.8 153 63.4
GSVIVG01009569001 Vitis vinifera HOM05D006792 ORTHO05D008489 6.3e-47 191.0 143 65.0
Actinidia15267 Actinidia chinensis HOM05D006792 ORTHO05D008489 8.3e-47 190.7 148 63.5
AUR62016018 Chenopodium quinoa HOM05D006792 ORTHO05D008489 8.3e-47 190.7 179 56.4
Potri.014G035300 Populus trichocarpa HOM05D006792 ORTHO05D008489 1.4e-46 189.9 157 59.9
AUR62021223 Chenopodium quinoa HOM05D006792 ORTHO05D008489 1.8e-46 189.5 179 56.4
QL02p006151 Quercus lobata HOM05D006792 ORTHO05D008489 2.4e-46 189.1 157 60.5
Gohir.A06G015700 Gossypium hirsutum HOM05D006792 ORTHO05D008489 3.1e-46 188.7 154 63.0
Sabra14G0025200 Salix brachista HOM05D006792 ORTHO05D008489 3.1e-46 188.7 157 59.9
Haze_17574 Corylus avellana HOM05D006792 ORTHO05D008489 5.4e-46 188.0 157 59.2
Duzib041G0477 Durio zibethinus HOM05D006792 ORTHO05D008489 5.4e-46 188.0 157 61.8
TAR381G0050 Trochodendron aralioides HOM05D006792 ORTHO05D008489 5.4e-46 188.0 155 61.9
MD15G1036100 Malus domestica HOM05D006792 ORTHO05D008489 7.0e-46 187.6 149 61.1
RcHm_v2.0_Chr6g0299831 Rosa chinensis HOM05D006792 ORTHO05D008489 1.2e-45 186.8 151 62.9
Cpa.g.sc376.3 Carica papaya HOM05D006792 ORTHO05D008489 2.0e-45 186.0 157 59.2
FAN27G1218 Fragaria x ananassa HOM05D006792 ORTHO05D008489 2.0e-45 186.0 153 60.8
Manes.10G083100 Manihot esculenta HOM05D006792 ORTHO05D008489 2.0e-45 186.0 157 62.4
TAR625G1025 Trochodendron aralioides HOM05D006792 ORTHO05D008489 2.0e-45 186.0 160 59.4
ClCG08G015590 Citrullus lanatus HOM05D006792 ORTHO05D008489 3.5e-45 185.3 156 59.0
Cc10_g03850 Coffea canephora HOM05D006792 ORTHO05D008489 3.5e-45 185.3 155 62.6
Lj4A777T61 Lonicera japonica HOM05D006792 ORTHO05D008489 3.5e-45 185.3 151 64.9
Prupe.1G390300 Prunus persica HOM05D006792 ORTHO05D008489 3.5e-45 185.3 157 61.1
CANSAT56G4245 Cannabis sativa HOM05D006792 ORTHO05D008489 4.5e-45 184.9 159 60.4
vmacro21565 Vaccinium macrocarpon HOM05D006792 ORTHO05D008489 4.5e-45 184.9 156 57.7
Gorai.010G016600 Gossypium raimondii HOM05D006792 ORTHO05D008489 7.7e-45 184.1 148 64.2
Hund23634 Selenicereus undatus HOM05D006792 ORTHO05D008489 7.7e-45 184.1 170 57.1
MELO3C010894.2 Cucumis melo HOM05D006792 ORTHO05D008489 1.7e-44 183.0 155 58.7
Gohir.D06G013900 Gossypium hirsutum HOM05D006792 ORTHO05D008489 1.7e-44 183.0 154 61.7
Ciclev10002498m.g Citrus clementina HOM05D006792 ORTHO05D008489 2.9e-44 182.2 157 59.2
Rhsim06G0045800 Rhododendron simsii HOM05D006792 ORTHO05D008489 2.9e-44 182.2 159 59.1
Thecc.08G014600 Theobroma cacao HOM05D006792 ORTHO05D008489 2.9e-44 182.2 157 60.5
Atru.chr13.615 Acer truncatum HOM05D006792 ORTHO05D008489 1.1e-43 180.3 152 61.8
EL10Ac3g05711 Beta vulgaris HOM05D006792 ORTHO05D008489 1.5e-43 179.9 168 58.3
Nn5g30170 Nelumbo nucifera HOM05D006792 ORTHO05D008489 2.5e-43 179.1 156 59.6
Peaxi162Scf00324g00610 Petunia axillaris HOM05D006792 ORTHO05D008489 3.3e-43 178.7 156 57.7
CsaV3_2G028180 Cucumis sativus L. HOM05D006792 ORTHO05D008489 4.2e-43 178.3 155 56.8
TWI36G0635 Tripterygium wilfordii HOM05D006792 ORTHO05D008489 7.2e-43 177.6 156 57.7
Sed0017537 Sechium edule HOM05D006792 ORTHO05D008489 1.6e-42 176.4 161 56.5
Solyc10g006520.3 Solanum lycopersicum HOM05D006792 ORTHO05D008489 2.1e-42 176.0 155 56.8
Sopen10g002470 Solanum pennellii HOM05D006792 ORTHO05D008489 2.1e-42 176.0 155 56.8
CAN.G1110.13 Capsicum annuum HOM05D006792 ORTHO05D008489 6.1e-42 174.5 156 57.1
Sc02g0006830 Simmondsia chinensis HOM05D006792 ORTHO05D008489 6.1e-42 174.5 147 60.5
Nitab4.5_0009129g0010 Nicotiana tabacum HOM05D006792 ORTHO05D008489 8.0e-42 174.1 154 54.5
THA.LOC104803789 Tarenaya hassleriana HOM05D006792 ORTHO05D008489 8.0e-42 174.1 155 57.4
Aqoxy5G01393 Aquilegia oxysepala HOM05D006792 ORTHO05D008489 1.8e-41 172.9 163 56.4
Nitab4.5_0000074g0180 Nicotiana tabacum HOM05D006792 ORTHO05D008489 1.8e-41 172.9 157 56.7
Aa31LG5G9340 Aethionema arabicum HOM05D006792 ORTHO05D008489 2.3e-41 172.6 146 58.2
Carub.0006s0578 Capsella rubella HOM05D006792 ORTHO05D008489 2.3e-41 172.6 141 61.0
Eucgr.L00645 Eucalyptus grandis HOM05D006792 ORTHO05D008489 2.3e-41 172.6 157 56.1
PGR031G1590 Punica granatum HOM05D006792 ORTHO05D008489 2.3e-41 172.6 149 57.0
PGSC0003DMG400014433 Solanum tuberosum HOM05D006792 ORTHO05D008489 2.3e-41 172.6 155 54.8
Glyma.20G204600 Glycine max HOM05D006792 ORTHO05D008489 6.8e-41 171.0 143 57.3
Ah.07g209080 Amaranthus hybridus HOM05D006792 ORTHO05D008489 8.9e-41 170.6 159 56.0
Carub.0006s0531 Capsella rubella HOM05D006792 ORTHO05D008489 8.9e-41 170.6 142 59.2
AL6G16990 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 5.7e-40 167.9 141 58.9
Thhalv10014748m.g Eutrema salsugineum HOM05D006792 ORTHO05D008489 5.7e-40 167.9 141 58.9
PGR031G1503 Punica granatum HOM05D006792 ORTHO05D008489 5.7e-40 167.9 148 56.1
TPR.G28895 Trifolium pratense HOM05D006792 ORTHO05D008489 5.7e-40 167.9 164 53.7
Sp6g36430 Schrenkiella parvula HOM05D006792 ORTHO05D008489 1.3e-39 166.8 142 56.3
AT5G06430 Arabidopsis thaliana HOM05D006792 ORTHO05D008489 1.7e-39 166.4 142 57.7
HanXRQChr09g0268121 Helianthus annuus HOM05D006792 ORTHO05D008489 2.2e-39 166.0 142 57.7
Lalb_Chr06g0172721 Lupinus albus HOM05D006792 ORTHO05D008489 1.1e-38 163.7 158 53.2
Medtr1g075100 Medicago truncatula HOM05D006792 ORTHO05D008489 1.1e-38 163.7 156 55.1
BolC9t59782H Brassica oleracea HOM05D006792 ORTHO05D008489 1.4e-38 163.3 144 56.2
BcaC06g32375 Brassica carinata HOM05D006792 ORTHO05D008489 1.8e-38 162.9 142 57.0
C09p70370 Brassica napus HOM05D006792 ORTHO05D008489 1.8e-38 162.9 142 57.0
AL6G16520 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 3.1e-38 162.2 141 56.7
Lsat_1_v5_gn_4_124401 Lactuca sativa HOM05D006792 ORTHO05D008489 5.4e-38 161.4 144 58.3
BcaC06g32576 Brassica carinata HOM05D006792 ORTHO05D008489 7.0e-38 161.0 140 57.9
A10p29960 Brassica napus HOM05D006792 ORTHO05D008489 7.0e-38 161.0 139 56.8
BraA10t45035Z Brassica rapa HOM05D006792 ORTHO05D008489 1.6e-37 159.8 139 56.1
DCAR_008785 Daucus carota HOM05D006792 ORTHO05D008489 2.0e-37 159.5 149 55.7
Lj5g0003340 Lotus japonicus HOM05D006792 ORTHO05D008489 2.0e-37 159.5 158 54.4
Phvul.L001959 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 5.9e-37 157.9 142 56.3
arahy.Tifrunner.gnm1.ann1.LDJ6K5 Arachis hypogaea HOM05D006792 ORTHO05D008489 7.8e-37 157.5 142 57.7
arahy.Tifrunner.gnm1.ann1.LP5K48 Arachis hypogaea HOM05D006792 ORTHO05D008489 7.8e-37 157.5 142 57.0
Psat6g128400 Pisum sativum HOM05D006792 ORTHO05D008489 1.0e-36 157.1 166 53.6
ECA232G0465 Erigeron canadensis HOM05D006792 ORTHO05D008489 1.7e-36 156.4 138 55.8
HPP92_009608 Vanilla planifolia HOM05D006792 ORTHO05D008489 6.6e-36 154.5 150 54.0
CDE07G1453 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 1.9e-35 152.9 148 54.1
ATR0225G026 Amborella trichopoda HOM05D006792 ORTHO05D008489 1.2e-34 150.2 153 53.6
VMungo0720G1195 Vigna mungo HOM05D006792 ORTHO05D008489 1.6e-34 149.8 145 54.5
Eucgr.E03397 Eucalyptus grandis HOM05D006792 ORTHO05D008489 3.6e-34 148.7 143 53.1
unitig_19.g30007 Utricularia gibba HOM05D006792 ORTHO05D008489 3.6e-34 148.7 149 53.7
unitig_8.g5015 Utricularia gibba HOM05D006792 ORTHO05D008489 4.7e-34 148.3 148 54.1
CDE04G1657 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 6.1e-34 147.9 148 52.0
Duzib093G1402 Durio zibethinus HOM05D006792 ORTHO05D008489 1.8e-33 146.4 127 61.4
COL.COLO4_26447 Corchorus olitorius HOM05D006792 ORTHO05D008489 8.9e-33 144.1 116 69.8
CARHR285910 Cardamine hirsuta HOM05D006792 ORTHO05D008489 9.2e-30 134.0 115 59.1
Ca_09830_v3 Cicer arietinum L. HOM05D002720 ORTHO05D002901 5.0e-28 128.3 125 56.8
CARHR206180 Cardamine hirsuta HOM05D006792 ORTHO05D008489 2.8e-26 122.5 113 56.6
QL03p014147 Quercus lobata HOM05D006792 ORTHO05D008489 1.7e-23 113.2 117 53.0
Zm00001eb167650 Zea mays HOM05D006792 ORTHO05D008489 8.3e-23 110.9 142 43.7
Phvul.004G112200 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 9.2e-22 107.5 114 50.9
SMO184G0001 Selaginella moellendorffii HOM05D006792 ORTHO05D008489 2.1e-21 106.3 71 70.4
Glyma.09G029200 Glycine max HOM05D006792 ORTHO05D008489 4.6e-21 105.1 110 51.8
Rhsim06G0045400 Rhododendron simsii HOM05D000500 ORTHO05D000367 1.0e-20 104.0 74 66.2
Pp3c14_7090 Physcomitrium patens HOM05D006792 ORTHO05D008489 1.5e-19 100.1 74 60.8
Os11g0592900 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 1.2e-18 97.1 157 37.6
Mapoly0072s0021 Marchantia polymorpha HOM05D006792 ORTHO05D008489 2.3e-17 92.8 74 56.8
Phvul.008G161700 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 1.2e-16 90.5 59 74.6
Rhsim06G0045200 Rhododendron simsii HOM05D000500 ORTHO05D000367 2.9e-15 85.9 58 72.4
Os11g0597500 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 8.3e-15 84.3 141 39.0
CBR_g61518 Chara braunii HOM05D006792 ORTHO05D008489 2.4e-14 82.8 116 41.4
Os11g0597601 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 3.1e-09 65.9 68 51.5


User provided reference genes

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