Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 5.1e-159 564.3 275 100.0
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 3.9e-50 202.6 284 45.8
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 3.4e-46 189.5 274 43.8
MSTRG.7356 Avicennia marina HOM05D007160 ORTHO05D005331 5.5e-44 182.2 287 42.5
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 7.9e-43 178.3 283 43.1
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.0e-42 177.9 283 43.1
Migut.H01472 Erythranthe guttata HOM05D007160 ORTHO05D005331 4.3e-33 146.0 237 45.6
Oeu001099.1 Olea europaea HOM05D007160 ORTHO05D005331 2.0e-30 137.1 306 35.0
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 8.5e-29 131.7 269 38.7
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 3.6e-27 126.3 337 32.3
SalBow7G0182 Salvia bowleyana HOM05D007160 ORTHO05D005331 6.1e-27 125.6 245 39.6
SalBow7G0780 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.0e-26 124.8 245 39.2
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 5.7e-25 119.0 289 34.6
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 6.9e-23 112.1 235 38.7
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 1.9e-20 104.0 267 34.5
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 7.9e-19 98.6 242 35.5
Solyc02g077710.1 Solanum lycopersicum HOM05D007160 ORTHO05D005331 1.0e-18 98.2 149 44.3
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 2.3e-18 97.1 253 34.4
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 6.7e-18 95.5 330 30.3
Sopen02g022600 Solanum pennellii HOM05D007160 ORTHO05D005331 1.5e-17 94.4 332 30.1
unitig_749.g13658 Utricularia gibba HOM05D020686 ORTHO05D005331 5.7e-17 92.4 257 31.5
unitig_26.g9356 Utricularia gibba HOM05D020686 ORTHO05D005331 9.7e-17 91.7 257 33.1
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 1.3e-16 91.3 273 34.4
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 2.2e-16 90.5 176 35.8
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 4.8e-16 89.4 285 33.3
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 6.3e-16 89.0 176 39.8
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 1.1e-15 88.2 310 30.6
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.1e-15 88.2 124 45.2
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 4.1e-15 86.3 339 29.5
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 4.1e-15 86.3 234 30.3
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 9.1e-15 85.1 154 40.9
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 1.2e-14 84.7 300 30.0
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 1.6e-14 84.3 239 33.1
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.0e-14 84.0 123 48.0
unitig_8.g3362 Utricularia gibba HOM05D020686 ORTHO05D005331 4.5e-14 82.8 229 33.2
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 1.0e-13 81.6 250 30.4
SGA_v2.0_scaffold112G31666 Striga asiatica HOM05D007160 ORTHO05D005331 1.3e-13 81.3 238 31.1
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.8e-13 79.7 120 44.2
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 6.5e-13 79.0 126 44.4
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.1e-12 78.2 268 31.0
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.1e-12 78.2 268 31.0
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 3.2e-12 76.6 269 29.7
Sc23g0001700 Simmondsia chinensis HOM05D028926 ORTHO05D005331 5.5e-12 75.9 285 31.6
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.2e-11 74.7 120 43.3
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 2.1e-11 73.9 286 31.5
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 2.7e-11 73.6 253 30.8
Sc17g0005960 Simmondsia chinensis HOM05D028926 ORTHO05D005331 2.7e-11 73.6 272 29.8
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 6.1e-11 72.4 262 30.9
Rhsim13G0180200 Rhododendron simsii HOM05D007160 ORTHO05D005331 6.1e-11 72.4 261 27.2
unitig_22.g6750 Utricularia gibba HOM05D020686 ORTHO05D005331 6.1e-11 72.4 228 33.3
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 8.0e-11 72.0 288 30.2
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 8.0e-11 72.0 273 30.4
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 8.0e-11 72.0 121 44.6
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.4e-10 71.2 269 26.0
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 1.4e-10 71.2 240 31.2
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 1.8e-10 70.9 258 29.1
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 1.8e-10 70.9 301 28.9
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 1.8e-10 70.9 287 25.4
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 1.8e-10 70.9 270 29.3
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 3.0e-10 70.1 236 30.5
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 5.2e-10 69.3 164 34.1
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 8.8e-10 68.6 246 29.3
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 2.0e-09 67.4 275 30.5
Thhalv10017182m.g Eutrema salsugineum HOM05D009159 ORTHO05D005331 3.3e-09 66.6 260 27.7
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 4.4e-09 66.2 229 29.7
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 7.5e-09 65.5 213 32.9
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 1.3e-08 64.7 277 28.5
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.3e-08 64.7 75 54.7
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 1.3e-08 64.7 271 28.8
TAR629G2975 Trochodendron aralioides HOM05D018497 ORTHO05D021348 1.3e-08 64.7 249 29.3
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 1.7e-08 64.3 294 28.6
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 1.7e-08 64.3 244 28.7
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 2.2e-08 63.9 268 26.9
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 2.2e-08 63.9 267 30.0
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 2.2e-08 63.9 245 28.6
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 2.2e-08 63.9 212 30.2
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.8e-08 63.5 73 50.7
PSO832G0372 Papaver somniferum HOM05D025247 ORTHO05D050219 2.8e-08 63.5 305 28.2
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 2.8e-08 63.5 287 26.8
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 4.8e-08 62.8 248 28.2
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 6.3e-08 62.4 317 26.5
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 6.3e-08 62.4 204 35.8
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 6.3e-08 62.4 292 24.7
Lsat_1_v5_gn_7_22701 Lactuca sativa HOM05D007160 ORTHO05D005331 6.3e-08 62.4 231 28.1
Thhalv10008366m.g Eutrema salsugineum HOM05D009159 ORTHO05D005331 1.1e-07 61.6 266 24.8
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 1.4e-07 61.2 103 43.7
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 1.8e-07 60.8 87 41.4
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 1.8e-07 60.8 87 41.4
Peaxi162Scf00926g00031 Petunia axillaris HOM05D007160 ORTHO05D005331 2.4e-07 60.5 357 26.3
Sp4g16260 Schrenkiella parvula HOM05D009159 ORTHO05D005331 2.4e-07 60.5 255 26.3
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 3.1e-07 60.1 315 24.4
Dinv01518 Davidia involucrata HOM05D008876 ORTHO05D010747 4.1e-07 59.7 279 28.7
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 5.3e-07 59.3 73 46.6
Manes.16G031700 Manihot esculenta HOM05D007160 ORTHO05D005331 5.3e-07 59.3 269 26.4
unitig_744.g24538 Utricularia gibba HOM05D020686 ORTHO05D005331 7.0e-07 58.9 260 30.4
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 9.1e-07 58.5 164 30.5
Manes.12G089700 Manihot esculenta HOM05D008876 ORTHO05D010747 1.6e-06 57.8 279 28.7
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 2.0e-06 57.4 156 35.9
CARHR027910 Cardamine hirsuta HOM05D009159 ORTHO05D005331 2.7e-06 57.0 243 25.5
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 2.7e-06 57.0 306 25.5
COL.COLO4_35512 Corchorus olitorius HOM05D008876 ORTHO05D010747 2.7e-06 57.0 260 26.5
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 2.7e-06 57.0 93 40.9
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 2.7e-06 57.0 288 27.1
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 3.5e-06 56.6 98 42.9
Sc24g0001110 Simmondsia chinensis HOM05D028926 ORTHO05D005331 3.5e-06 56.6 235 29.4
A08p25580 Brassica napus HOM05D009159 ORTHO05D005331 4.5e-06 56.2 171 28.7
BraA08t34510Z Brassica rapa HOM05D009159 ORTHO05D005331 4.5e-06 56.2 171 28.7
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 4.5e-06 56.2 212 28.8
BcaB03g12106 Brassica carinata HOM05D009159 ORTHO05D005331 5.9e-06 55.8 267 27.0
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 7.7e-06 55.5 86 43.0


User provided reference genes

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