Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 5.8e-253 877.1 445 100.0
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 2.9e-220 768.5 445 86.7
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 8.7e-217 756.9 440 87.0
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 1.1e-198 696.8 436 79.8
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 1.7e-196 689.5 438 79.0
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 2.5e-195 685.6 445 78.0
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 2.0e-192 676.0 443 77.0
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 5.7e-192 674.5 440 77.5
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 1.1e-190 670.2 456 75.4
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 1.3e-188 663.3 436 76.4
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 6.5e-188 661.0 429 76.9
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 7.2e-187 657.5 433 77.1
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.6e-186 655.2 437 74.8
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 1.4e-185 653.3 436 75.0
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.5e-184 649.8 444 75.2
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 2.6e-184 649.0 437 74.8
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 9.7e-184 647.1 439 74.3
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 1.7e-183 646.4 436 75.9
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 3.7e-183 645.2 435 74.3
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 2.4e-182 642.5 436 74.8
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 5.3e-182 641.3 443 73.1
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 1.2e-181 640.2 439 74.5
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 2.6e-181 639.0 434 74.9
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 1.0e-180 637.1 426 75.4
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 5.0e-180 634.8 433 74.8
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 8.5e-180 634.0 459 72.1
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 1.1e-179 633.6 441 73.5
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 2.5e-179 632.5 437 73.0
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 7.2e-179 630.9 445 71.9
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 7.2e-179 630.9 443 72.7
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 2.7e-178 629.0 434 73.3
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 4.7e-178 628.2 436 72.9
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 2.3e-177 625.9 444 71.2
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 3.9e-177 625.2 437 73.7
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 5.2e-177 624.8 436 72.2
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 9.7e-176 620.5 441 72.3
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.7e-175 619.8 432 72.5
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 2.8e-175 619.0 440 71.4
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 2.8e-175 619.0 433 73.4
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 8.2e-175 617.5 438 71.2
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 3.1e-174 615.5 444 71.4
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 1.6e-173 613.2 440 71.8
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 2.6e-173 612.5 438 71.7
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 1.0e-172 610.5 448 69.2
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 1.0e-172 610.5 437 70.5
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 1.7e-172 609.8 437 70.7
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 2.9e-172 609.0 442 72.2
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 6.5e-172 607.8 442 71.0
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 8.5e-172 607.4 444 71.6
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 1.5e-171 606.7 436 71.1
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 1.5e-171 606.7 437 70.7
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 1.5e-171 606.7 433 71.4
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 1.5e-171 606.7 440 68.9
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 2.5e-171 605.9 429 71.6
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 2.5e-171 605.9 438 71.5
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 4.2e-171 605.1 430 70.9
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 5.5e-171 604.7 436 69.5
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 1.6e-170 603.2 430 72.8
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 3.6e-170 602.1 438 71.2
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 3.6e-170 602.1 443 70.7
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.6e-170 602.1 431 70.1
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 4.7e-170 601.7 444 69.1
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 1.8e-169 599.7 432 69.9
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 2.3e-169 599.4 440 70.7
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 4.0e-169 598.6 426 72.8
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 8.8e-169 597.4 440 68.0
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 4.4e-168 595.1 445 67.0
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 2.8e-167 592.4 459 68.0
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 1.8e-166 589.7 433 69.7
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 1.6e-165 586.6 436 68.1
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 4.5e-165 585.1 441 65.8
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 5.9e-165 584.7 451 67.4
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 1.3e-164 583.6 432 69.7
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 5.0e-164 581.6 440 69.5
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 8.5e-164 580.9 442 69.2
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 8.5e-164 580.9 454 67.6
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 1.5e-163 580.1 448 68.1
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 4.2e-163 578.6 442 68.6
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 9.4e-163 577.4 446 68.2
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 1.6e-162 576.6 437 69.3
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 1.6e-162 576.6 437 69.3
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 6.1e-162 574.7 437 69.6
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 6.1e-162 574.7 437 69.6
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 3.0e-161 572.4 434 66.8
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 4.0e-161 572.0 453 67.8
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 8.8e-161 570.9 441 67.3
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 5.7e-160 568.2 440 67.7
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 1.3e-159 567.0 437 67.0
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 2.8e-159 565.8 495 63.0
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 3.7e-159 565.5 445 67.2
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 3.1e-158 562.4 445 64.3
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 3.5e-157 558.9 447 64.0
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 1.3e-156 557.0 371 73.9
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 3.8e-156 555.4 431 67.1
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 7.5e-152 541.2 342 79.8
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 4.3e-147 525.4 442 64.5
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 1.2e-146 523.9 387 70.3
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 8.9e-145 517.7 431 64.0
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 1.2e-144 517.3 348 73.6
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 2.2e-143 513.1 442 63.1
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 3.5e-141 505.8 436 62.2
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 6.2e-138 495.0 360 72.5
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 2.3e-137 493.0 338 73.1
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 1.4e-129 467.2 347 69.7
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 2.6e-128 463.0 618 47.1
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 1.4e-126 457.2 328 71.6
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 5.8e-120 435.3 439 51.0
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 1.3e-119 434.1 434 52.3
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 1.3e-119 434.1 451 52.1
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 2.7e-117 426.4 289 74.0
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 3.3e-115 419.5 441 50.1
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.3e-90 337.8 315 53.7
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 1.1e-86 324.7 456 42.1
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 1.9e-86 323.9 283 63.6
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.9e-84 316.2 205 76.1
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.6e-82 310.8 333 52.9
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 5.5e-78 295.8 213 69.5
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 2.5e-46 190.7 157 63.1
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 1.3e-42 178.3 400 34.5
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-41 173.7 205 51.2
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 4.1e-33 146.7 102 72.5
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.8e-28 131.3 92 71.7
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 6.8e-28 129.4 116 56.9
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 1.8e-20 104.8 72 69.4
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 7.8e-16 89.4 111 39.6
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 7.8e-16 89.4 97 43.3
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 2.6e-11 74.3 143 35.7
Os10g0498800 Oryza sativa ssp. japonica HOM05D006332 ORTHO05D008421 1.2e-08 65.5 62 46.8


User provided reference genes

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