Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 4.8e-88 327.8 164 100.0
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 2.3e-74 282.3 166 87.3
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 8.2e-72 273.9 165 84.2
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 4.4e-65 251.5 164 76.2
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 1.1e-63 246.9 157 79.0
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 7.0e-63 244.2 158 77.2
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 1.2e-62 243.4 153 77.1
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 1.0e-61 240.4 154 76.6
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 1.3e-61 240.0 157 74.5
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 1.7e-61 239.6 156 75.0
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 1.7e-61 239.6 154 76.0
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 2.2e-61 239.2 157 73.2
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 3.8e-61 238.4 166 70.5
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 5.0e-61 238.0 157 72.6
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 5.0e-61 238.0 159 71.1
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 5.0e-61 238.0 154 76.6
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 6.5e-61 237.7 153 77.1
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 6.5e-61 237.7 153 77.1
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 6.5e-61 237.7 162 74.7
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 8.5e-61 237.3 155 74.8
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 1.9e-60 236.1 152 76.3
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 4.2e-60 235.0 156 74.4
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 4.2e-60 235.0 156 74.4
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 4.2e-60 235.0 157 74.5
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 5.5e-60 234.6 153 74.5
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 7.2e-60 234.2 153 73.2
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 2.1e-59 232.6 153 75.2
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 2.1e-59 232.6 163 68.1
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 3.6e-59 231.9 158 72.8
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 4.7e-59 231.5 164 67.7
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 4.7e-59 231.5 153 74.5
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 4.7e-59 231.5 159 69.8
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 6.1e-59 231.1 153 75.2
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 6.1e-59 231.1 167 70.1
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 6.1e-59 231.1 157 70.1
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 8.0e-59 230.7 160 70.0
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 8.0e-59 230.7 160 70.0
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 1.4e-58 229.9 153 75.2
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 1.4e-58 229.9 154 72.7
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.4e-58 229.9 164 67.7
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 1.4e-58 229.9 158 71.5
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 3.0e-58 228.8 153 75.8
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 3.0e-58 228.8 159 69.8
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 4.0e-58 228.4 155 73.5
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 1.2e-57 226.9 164 67.7
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.2e-57 226.9 164 67.7
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 1.2e-57 226.9 156 70.5
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 2.0e-57 226.1 158 69.6
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 2.6e-57 225.7 153 71.9
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 4.4e-57 224.9 157 69.4
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 4.4e-57 224.9 153 71.2
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 7.5e-57 224.2 163 66.3
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 9.8e-57 223.8 162 68.5
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 1.3e-56 223.4 153 71.2
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 2.2e-56 222.6 157 68.8
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 2.2e-56 222.6 158 69.6
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 6.3e-56 221.1 153 70.6
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 6.3e-56 221.1 153 69.3
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 6.3e-56 221.1 187 61.0
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 8.3e-56 220.7 153 70.6
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 8.3e-56 220.7 193 61.7
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 1.8e-55 219.5 154 70.1
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 5.4e-55 218.0 153 66.0
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 5.4e-55 218.0 153 69.9
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 7.0e-55 217.6 153 69.3
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 9.1e-55 217.2 165 65.5
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 3.5e-54 215.3 160 66.9
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 3.5e-54 215.3 159 67.3
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 1.7e-53 213.0 159 66.0
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 3.8e-53 211.8 158 70.3
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 6.5e-53 211.1 164 64.0
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 1.5e-52 209.9 164 62.8
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 1.5e-52 209.9 158 69.6
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 1.9e-52 209.5 153 67.3
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 4.2e-52 208.4 152 66.4
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 4.2e-52 208.4 164 62.8
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 4.2e-52 208.4 160 64.4
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 5.5e-52 208.0 153 64.7
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 7.2e-52 207.6 153 64.7
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 2.8e-51 205.7 177 58.8
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 3.6e-51 205.3 164 62.2
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 3.6e-51 205.3 229 52.4
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 2.0e-49 199.5 157 65.6
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 7.5e-49 197.6 133 73.7
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 1.7e-48 196.4 162 62.3
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 4.9e-48 194.9 151 63.6
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 9.2e-47 190.7 121 73.6
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.2e-46 190.3 154 64.9
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 1.6e-46 189.9 151 61.6
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 2.7e-46 189.1 162 62.3
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 5.0e-45 184.9 114 75.4
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 1.5e-44 183.3 123 70.7
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 2.6e-41 172.6 118 68.6
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 1.7e-40 169.9 122 65.6
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 4.6e-38 161.8 108 72.2
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 6.6e-37 157.9 110 71.8
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 8.0e-35 151.0 91 76.9
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 1.4e-34 150.2 92 72.8
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 2.6e-33 146.0 153 56.9
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 3.1e-26 122.5 75 80.0
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 2.9e-24 115.9 162 40.7
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 4.3e-20 102.1 63 79.4
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 2.1e-14 83.2 75 62.7
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 7.3e-12 74.7 81 58.0
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 8.1e-11 71.2 53 66.0
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 3.1e-10 69.3 72 47.2


User provided reference genes

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