Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13083 Avicennia marina HOM05D001231 ORTHO05D001012 8.3e-54 213.4 103 100.0
Migut.M01514 Erythranthe guttata HOM05D001231 ORTHO05D001012 5.4e-13 77.8 80 48.8
Migut.H01662 Erythranthe guttata HOM05D001231 ORTHO05D001012 2.7e-12 75.5 83 47.0
SalBow1G2431 Salvia bowleyana HOM05D001231 ORTHO05D001012 1.0e-11 73.6 62 51.6
SalBow8G5419 Salvia bowleyana HOM05D001231 ORTHO05D001012 1.3e-09 66.6 87 43.7
SGA_v2.0_scaffold49G18198 Striga asiatica HOM05D001231 ORTHO05D001012 2.8e-09 65.5 56 44.6
SalBow8G3771 Salvia bowleyana HOM05D001231 ORTHO05D001012 3.6e-09 65.1 67 47.8
SalBow8G2012 Salvia bowleyana HOM05D001231 ORTHO05D001012 2.4e-08 62.4 81 43.2
FvH4_3g14620 Fragaria vesca HOM05D001231 ORTHO05D001012 4.0e-08 61.6 65 40.0
SalBow8G2299 Salvia bowleyana HOM05D001231 ORTHO05D001012 9.0e-08 60.5 71 39.4
SalBow8G3014 Salvia bowleyana HOM05D001231 ORTHO05D001012 9.0e-08 60.5 71 39.4
Nn7g38191 Nelumbo nucifera HOM05D001231 ORTHO05D001012 2.0e-07 59.3 67 38.8
RcHm_v2.0_Chr5g0024081 Rosa chinensis HOM05D001231 ORTHO05D001012 2.6e-07 58.9 65 36.9
SalBow1G3487 Salvia bowleyana HOM05D001231 ORTHO05D001012 2.6e-07 58.9 56 44.6
TWI79G1670 Tripterygium wilfordii HOM05D001231 ORTHO05D001012 5.8e-07 57.8 68 41.2
FvH4_3g14600 Fragaria vesca HOM05D001231 ORTHO05D001012 7.6e-07 57.4 65 40.0
FAN16G3645 Fragaria x ananassa HOM05D001231 ORTHO05D001012 7.6e-07 57.4 65 40.0
SGA_v2.0_scaffold7G03620 Striga asiatica HOM05D000870 ORTHO05D000715 7.6e-07 57.4 49 49.0
Nn7g38263 Nelumbo nucifera HOM05D001231 ORTHO05D001012 1.3e-06 56.6 67 40.3
FAN16G3227 Fragaria x ananassa HOM05D001231 ORTHO05D001012 2.2e-06 55.8 82 35.4
RcHm_v2.0_Chr5g0024061 Rosa chinensis HOM05D001231 ORTHO05D001012 2.2e-06 55.8 65 36.9
BcaB04g20312 Brassica carinata HOM05D001231 ORTHO05D001012 2.9e-06 55.5 65 40.0
BcaC09g49338 Brassica carinata HOM05D001231 ORTHO05D001012 2.9e-06 55.5 65 40.0
A01p29870 Brassica napus HOM05D001231 ORTHO05D001012 2.9e-06 55.5 65 40.0
C01p37750 Brassica napus HOM05D001231 ORTHO05D001012 2.9e-06 55.5 65 40.0
BolC1t03737H Brassica oleracea HOM05D001231 ORTHO05D001012 2.9e-06 55.5 65 40.0
BraA01t03115Z Brassica rapa HOM05D001231 ORTHO05D001012 2.9e-06 55.5 65 40.0
Thhalv10005233m.g Eutrema salsugineum HOM05D001231 ORTHO05D001012 2.9e-06 55.5 73 37.0
RcHm_v2.0_Chr5g0024091 Rosa chinensis HOM05D001231 ORTHO05D001012 2.9e-06 55.5 65 35.4
Sopen09g029290 Solanum pennellii HOM05D018601 ORTHO05D018052 2.9e-06 55.5 66 34.8
Prupe.4G131400 Prunus persica HOM05D001231 ORTHO05D001012 3.8e-06 55.1 65 38.5
Sopen10g004450 Solanum pennellii HOM05D018601 ORTHO05D018052 4.9e-06 54.7 66 33.3
CARHR144790 Cardamine hirsuta HOM05D001231 ORTHO05D001012 6.4e-06 54.3 76 35.5
Cc02_g09620 Coffea canephora HOM05D018349 ORTHO05D011207 6.4e-06 54.3 77 36.4
MD05G1234500 Malus domestica HOM05D001231 ORTHO05D001012 6.4e-06 54.3 65 36.9


User provided reference genes

Program Settings