Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13048 Avicennia marina HOM05D003788 ORTHO05D004633 0.0e+00 2238.4 1140 100.0
MSTRG.7044 Avicennia marina HOM05D003788 ORTHO05D004633 3.9e-213 746.1 1139 44.5
SalBow8G5584 Salvia bowleyana HOM05D003788 ORTHO05D004633 2.8e-211 740.0 1222 43.3
MSTRG.16130 Avicennia marina HOM05D003788 ORTHO05D004633 4.1e-210 736.1 1147 43.9
Oeu052883.2 Olea europaea HOM05D003788 ORTHO05D004633 2.1e-206 723.8 1219 42.6
Dinv40920 Davidia involucrata HOM05D003788 ORTHO05D004633 1.3e-168 598.2 1227 38.0
Oeu015274.1 Olea europaea HOM05D003788 ORTHO05D004633 1.2e-158 565.1 1067 41.1
Dinv19640 Davidia involucrata HOM05D003788 ORTHO05D004633 9.9e-148 528.9 1186 36.2
CSS0022631 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 1.7e-131 474.9 1213 34.5
Nitab4.5_0001732g0050 Nicotiana tabacum HOM05D003788 ORTHO05D004633 5.1e-112 410.2 1224 33.0
Sopen07g034380 Solanum pennellii HOM05D003788 ORTHO05D004633 5.1e-112 410.2 1206 33.3
PGSC0003DMG400022144 Solanum tuberosum HOM05D003788 ORTHO05D004633 8.7e-112 409.5 1222 32.9
Nitab4.5_0000152g0020 Nicotiana tabacum HOM05D003788 ORTHO05D004633 7.4e-111 406.4 1214 32.9
Peaxi162Scf00232g00078 Petunia axillaris HOM05D003788 ORTHO05D004633 2.2e-107 394.8 1214 33.1
Solyc07g066200.4 Solanum lycopersicum HOM05D003788 ORTHO05D004633 3.8e-107 394.0 1205 32.6
Cfa016964 Carpinus fangiana HOM05D003788 ORTHO05D004633 9.3e-106 389.4 1233 31.7
Haze_09919 Corylus avellana HOM05D003788 ORTHO05D004633 4.6e-105 387.1 1248 32.3
Actinidia31533 Actinidia chinensis HOM05D003788 ORTHO05D004633 3.9e-104 384.0 1174 32.5
Rhsim06G0235500 Rhododendron simsii HOM05D003788 ORTHO05D004633 1.8e-101 375.2 1165 32.4
QL08p000460 Quercus lobata HOM05D003788 ORTHO05D004633 9.0e-101 372.9 1245 32.0
Prupe.6G035800 Prunus persica HOM05D003788 ORTHO05D004633 3.4e-100 370.9 1233 32.0
CSS0001498 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 1.0e-99 369.4 1225 31.3
CSS0046183 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 1.0e-99 369.4 1225 31.3
Thecc.07G001100 Theobroma cacao HOM05D003788 ORTHO05D004633 4.2e-98 364.0 1244 31.4
Manes.05G204500 Manihot esculenta HOM05D003788 ORTHO05D004633 5.5e-98 363.6 1254 31.6
vmacro11644 Vaccinium macrocarpon HOM05D003788 ORTHO05D004633 1.8e-96 358.6 1143 31.3
Ciclev10007254m.g Citrus clementina HOM05D003788 ORTHO05D004633 1.5e-95 355.5 1232 30.7
Lj1A901G37 Lonicera japonica HOM05D003788 ORTHO05D004633 2.5e-95 354.8 1012 35.1
Atru.chr2.3902 Acer truncatum HOM05D003788 ORTHO05D004633 1.1e-93 349.4 1224 32.0
TAR629G3040 Trochodendron aralioides HOM05D003788 ORTHO05D004633 1.0e-91 342.8 1225 30.4
Gohir.A13G128300 Gossypium hirsutum HOM05D003788 ORTHO05D004633 5.5e-90 337.0 1247 30.9
CiPaw.12G143000 Carya illinoinensis HOM05D003788 ORTHO05D004633 7.2e-90 336.7 1242 30.9
MD11G1046500 Malus domestica HOM05D003788 ORTHO05D004633 4.7e-89 334.0 1226 31.0
MD03G1043400 Malus domestica HOM05D003788 ORTHO05D004633 7.9e-89 333.2 1241 31.0
Gorai.013G147700 Gossypium raimondii HOM05D003788 ORTHO05D004633 3.9e-88 330.9 1243 30.5
Sabra11G0137700 Salix brachista HOM05D003788 ORTHO05D004633 2.8e-86 324.7 1251 29.7
TAR626G0610 Trochodendron aralioides HOM05D003788 ORTHO05D004633 4.8e-86 323.9 1243 30.4
Gohir.D13G131700 Gossypium hirsutum HOM05D003788 ORTHO05D004633 1.4e-85 322.4 1243 29.9
DCAR_013754 Daucus carota HOM05D003788 ORTHO05D004633 1.8e-85 322.0 1214 29.8
RcHm_v2.0_Chr5g0074531 Rosa chinensis HOM05D003788 ORTHO05D004633 4.1e-85 320.9 1235 31.5
CiPaw.11G210900 Carya illinoinensis HOM05D003788 ORTHO05D004633 7.0e-85 320.1 1233 30.7
Potri.011G169100 Populus trichocarpa HOM05D003788 ORTHO05D004633 1.6e-84 318.9 1266 29.2
Duzib213G0477 Durio zibethinus HOM05D003788 ORTHO05D004633 5.0e-83 313.9 1248 30.1
COL.COLO4_07793 Corchorus olitorius HOM05D003788 ORTHO05D004633 1.1e-82 312.8 1268 30.0
Lj8C184G1 Lonicera japonica HOM05D003788 ORTHO05D004633 1.6e-81 308.9 1000 32.9
Duzib268G1743 Durio zibethinus HOM05D003788 ORTHO05D004633 8.0e-81 306.6 1249 29.5
Potri.001G472400 Populus trichocarpa HOM05D003788 ORTHO05D004633 3.0e-80 304.7 1252 29.3
FvH4_3g41530 Fragaria vesca HOM05D003788 ORTHO05D004633 5.2e-80 303.9 1239 30.5
TAR627G0146 Trochodendron aralioides HOM05D003788 ORTHO05D004633 5.2e-80 303.9 1032 31.7
Migut.M01579 Erythranthe guttata HOM05D003788 ORTHO05D004633 5.7e-79 300.4 583 40.8
FAN11G0056 Fragaria x ananassa HOM05D003788 ORTHO05D004633 3.7e-78 297.7 1238 30.5
Sabra16G0320700 Salix brachista HOM05D003788 ORTHO05D004633 8.2e-78 296.6 1246 29.2
Manes.01G007100 Manihot esculenta HOM05D003788 ORTHO05D004633 2.0e-76 292.0 1036 31.7
FAN16G1134 Fragaria x ananassa HOM05D003788 ORTHO05D004633 1.2e-73 282.7 1245 30.6
FAN21G2445 Fragaria x ananassa HOM05D003788 ORTHO05D004633 8.0e-73 280.0 1223 30.1
FAN25G3203 Fragaria x ananassa HOM05D003788 ORTHO05D004633 1.8e-69 268.9 1244 29.8
CANSAT11G0655 Cannabis sativa HOM05D003788 ORTHO05D004633 3.1e-69 268.1 1249 27.7
PGR031G1033 Punica granatum HOM05D003788 ORTHO05D004633 9.1e-69 266.5 1194 29.4
TWI38G0822 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 1.6e-68 265.8 1234 28.9
TWI39G0992 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 2.2e-67 261.9 1218 28.7
Eucgr.F01984 Eucalyptus grandis HOM05D003788 ORTHO05D004633 2.5e-66 258.5 1216 28.0
Migut.H01707 Erythranthe guttata HOM05D003788 ORTHO05D004633 9.4e-66 256.5 999 31.9
Duzib170G0482 Durio zibethinus HOM05D003788 ORTHO05D004633 1.6e-65 255.8 1242 28.7
GSVIVG01014849001 Vitis vinifera HOM05D003788 ORTHO05D004633 5.2e-64 250.8 919 29.5
CsaV3_3G003820 Cucumis sativus L. HOM05D003788 ORTHO05D004633 4.4e-63 247.7 1036 30.3
MELO3C014063.2 Cucumis melo HOM05D003788 ORTHO05D004633 1.6e-60 239.2 1044 30.2
Cc05_g15750 Coffea canephora HOM05D003788 ORTHO05D004633 2.3e-59 235.3 576 34.9
Gohir.A08G026000 Gossypium hirsutum HOM05D003788 ORTHO05D004633 2.9e-59 235.0 1099 29.3
ClCG10G003840 Citrullus lanatus HOM05D003788 ORTHO05D004633 2.8e-57 228.4 1047 29.9
ClCG10G003960 Citrullus lanatus HOM05D003788 ORTHO05D004633 1.4e-56 226.1 1047 29.9
Gohir.D08G036500 Gossypium hirsutum HOM05D003788 ORTHO05D004633 1.4e-56 226.1 1111 28.4
Nn1g07620 Nelumbo nucifera HOM05D003788 ORTHO05D004633 1.8e-56 225.7 848 29.8
Gorai.004G034500 Gossypium raimondii HOM05D003788 ORTHO05D004633 1.2e-55 223.0 1107 28.9
Actinidia30347 Actinidia chinensis HOM05D003788 ORTHO05D004633 1.8e-53 215.7 852 29.5
SGA_v2.0_scaffold7G03552 Striga asiatica HOM05D003788 ORTHO05D004633 2.0e-52 212.2 1150 28.6
ClCG00G001230 Citrullus lanatus HOM05D003788 ORTHO05D004633 7.8e-52 210.3 1003 29.1
PSO782G4685 Papaver somniferum HOM05D003788 ORTHO05D004633 1.6e-49 202.6 1165 27.2
unitig_0.g982 Utricularia gibba HOM05D003788 ORTHO05D004633 2.1e-49 202.2 957 29.3
MBI15_g35998_MAGBIO Magnolia biondii HOM05D003788 ORTHO05D004633 3.1e-48 198.4 1093 28.0
Actinidia30346 Actinidia chinensis HOM05D003788 ORTHO05D004633 3.7e-46 191.4 234 49.1
Sed0020897 Sechium edule HOM05D003788 ORTHO05D004633 1.9e-45 189.1 991 28.4
Cc05_g15760 Coffea canephora HOM05D003788 ORTHO05D004633 5.4e-45 187.6 448 34.4
Sed0023936 Sechium edule HOM05D003788 ORTHO05D004633 4.6e-44 184.5 1025 27.8
unitig_37.g12213 Utricularia gibba HOM05D003788 ORTHO05D004633 6.0e-44 184.1 915 29.6
THA.LOC104822683 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 3.9e-43 181.4 963 28.9
SGA_v2.0_scaffold11G05962 Striga asiatica HOM05D003788 ORTHO05D004633 6.2e-41 174.1 403 36.2
Hund23029 Selenicereus undatus HOM05D003788 ORTHO05D004633 4.4e-39 167.9 977 28.2
HanXRQChr17g0546861 Helianthus annuus HOM05D003788 ORTHO05D004633 1.3e-38 166.4 799 27.8
HanXRQChr03g0079411 Helianthus annuus HOM05D003788 ORTHO05D004633 4.1e-37 161.4 923 26.8
EL10Ac4g07522 Beta vulgaris HOM05D003788 ORTHO05D004633 9.2e-37 160.2 966 26.8
AUR62035659 Chenopodium quinoa HOM05D003788 ORTHO05D004633 9.2e-37 160.2 934 27.4
TWI14G1222 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 9.2e-37 160.2 698 29.9
ECA240G4117 Erigeron canadensis HOM05D003788 ORTHO05D004633 2.5e-34 152.1 897 27.8
unitig_46.g18528 Utricularia gibba HOM05D003788 ORTHO05D004633 4.3e-34 151.4 889 26.2
Aqoxy4G02274 Aquilegia oxysepala HOM05D003788 ORTHO05D004633 7.3e-34 150.6 1238 25.1
THA.LOC104810306 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 7.3e-34 150.6 945 27.2
ECA236G3073 Erigeron canadensis HOM05D003788 ORTHO05D004633 2.1e-33 149.1 965 26.8
Lsat_1_v5_gn_7_115701 Lactuca sativa HOM05D003788 ORTHO05D004633 6.2e-33 147.5 902 26.2
Sc03g0011790 Simmondsia chinensis HOM05D003788 ORTHO05D004633 8.1e-33 147.1 711 28.6
MBI14_g10253_MAGBIO Magnolia biondii HOM05D003788 ORTHO05D004633 3.1e-32 145.2 250 41.6
HanXRQChr11g0346921 Helianthus annuus HOM05D003788 ORTHO05D004633 4.0e-32 144.8 243 40.7
THA.LOC104811704 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 4.0e-32 144.8 910 25.8
Lsat_1_v5_gn_9_88661 Lactuca sativa HOM05D003788 ORTHO05D004633 8.9e-32 143.7 294 38.4
Zm00001eb424700 Zea mays HOM05D003788 ORTHO05D004633 8.9e-32 143.7 909 24.9
Hma1.2p1_0321F.1_g124360 Hydrangea macrophylla HOM05D003788 ORTHO05D004633 1.5e-31 142.9 161 54.0
Ah.04g166650 Amaranthus hybridus HOM05D003788 ORTHO05D004633 5.4e-29 134.4 175 46.9
AL191U10030 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 5.4e-29 134.4 887 26.2
ATR0751G208 Amborella trichopoda HOM05D003788 ORTHO05D004633 3.0e-27 128.6 242 40.5
Os04g0471400 Oryza sativa ssp. japonica HOM05D003788 ORTHO05D004633 3.0e-27 128.6 892 24.3
Zm00001eb079970 Zea mays HOM05D003788 ORTHO05D004633 1.9e-26 125.9 912 25.3
Thhalv10012573m.g Eutrema salsugineum HOM05D003788 ORTHO05D004633 2.5e-26 125.6 919 26.3
HPP92_022807 Vanilla planifolia HOM05D003788 ORTHO05D004633 4.3e-26 124.8 247 40.1
AUR62017148 Chenopodium quinoa HOM05D003788 ORTHO05D004633 5.6e-26 124.4 993 25.9
HPP92_015789 Vanilla planifolia HOM05D003788 ORTHO05D004633 7.3e-26 124.0 126 54.8
Carub.0008s1656 Capsella rubella HOM05D003788 ORTHO05D004633 1.6e-25 122.9 969 25.4
Sp6g18090 Schrenkiella parvula HOM05D003788 ORTHO05D004633 1.6e-25 122.9 914 26.1
AL8G31870 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 3.6e-25 121.7 874 25.5
Aa31LG3G12140 Aethionema arabicum HOM05D003788 ORTHO05D004633 1.3e-22 113.2 905 24.6
CDE06G0258 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 3.8e-22 111.7 284 31.7
Carub.0008s1657 Capsella rubella HOM05D003788 ORTHO05D004633 1.1e-21 110.2 684 27.0
AT5G56240 Arabidopsis thaliana HOM05D003788 ORTHO05D004633 4.2e-21 108.2 935 24.2
BcaB01g04387 Brassica carinata HOM05D003788 ORTHO05D004633 5.4e-21 107.8 163 45.4
AL8G31880 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 2.7e-20 105.5 834 24.7
C03p15980 Brassica napus HOM05D003788 ORTHO05D004633 2.7e-20 105.5 130 51.5
BcaC04g20117 Brassica carinata HOM05D003788 ORTHO05D004633 3.5e-20 105.1 916 24.5
BolC9t57603H Brassica oleracea HOM05D003788 ORTHO05D004633 4.6e-20 104.8 906 24.8
C09p47480 Brassica napus HOM05D003788 ORTHO05D004633 1.0e-19 103.6 908 25.2
BcaC01g06410 Brassica carinata HOM05D003788 ORTHO05D004633 2.3e-19 102.4 165 43.0
BolC3t14026H Brassica oleracea HOM05D003788 ORTHO05D004633 2.3e-19 102.4 165 43.0
BcaC03g14234 Brassica carinata HOM05D003788 ORTHO05D004633 3.0e-19 102.1 187 39.0
CARHR269650 Cardamine hirsuta HOM05D003788 ORTHO05D004633 3.9e-19 101.7 681 25.8
AT5G56250 Arabidopsis thaliana HOM05D003788 ORTHO05D004633 6.6e-19 100.9 694 25.2
C02p15400 Brassica napus HOM05D003788 ORTHO05D004633 6.6e-19 100.9 192 38.5
BolC2t07655H Brassica oleracea HOM05D003788 ORTHO05D004633 6.6e-19 100.9 192 38.5
Thhalv10012702m.g Eutrema salsugineum HOM05D003788 ORTHO05D004633 1.1e-18 100.1 804 23.6
BcaB05g22252 Brassica carinata HOM05D003788 ORTHO05D004633 1.5e-18 99.8 186 40.9
A02p09250 Brassica napus HOM05D003788 ORTHO05D004633 3.3e-18 98.6 172 42.4
C02p15420 Brassica napus HOM05D003788 ORTHO05D004633 4.3e-18 98.2 935 23.9
BolC2t07656H Brassica oleracea HOM05D003788 ORTHO05D004633 4.3e-18 98.2 935 23.9
A03p13630 Brassica napus HOM05D003788 ORTHO05D004633 7.3e-18 97.4 164 41.5
BraA03t10667Z Brassica rapa HOM05D003788 ORTHO05D004633 7.3e-18 97.4 164 41.5
BraA02t05991Z Brassica rapa HOM05D003788 ORTHO05D004633 1.3e-17 96.7 927 23.7
BcaB05g22251 Brassica carinata HOM05D003788 ORTHO05D004633 1.6e-17 96.3 937 23.8
Sp6g18100 Schrenkiella parvula HOM05D003788 ORTHO05D004633 2.8e-17 95.5 883 23.6
BraA10t43453Z Brassica rapa HOM05D003788 ORTHO05D004633 3.6e-17 95.1 931 23.8
A02p09290 Brassica napus HOM05D003788 ORTHO05D004633 1.1e-16 93.6 948 24.6
A10p13490 Brassica napus HOM05D003788 ORTHO05D004633 1.8e-16 92.8 931 23.7
C09p47500 Brassica napus HOM05D003788 ORTHO05D004633 2.0e-15 89.4 193 35.2
Cpa.g.sc12.61 Carica papaya HOM05D003788 ORTHO05D004633 2.6e-15 89.0 445 27.0
CDE11G0275 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 5.8e-15 87.8 1127 23.8
BcaB01g04386 Brassica carinata HOM05D003788 ORTHO05D004633 1.3e-14 86.7 148 41.2
BolC3t14027H Brassica oleracea HOM05D003788 ORTHO05D004633 1.1e-13 83.6 687 24.7
MBI14_g12743_MAGBIO Magnolia biondii HOM05D003788 ORTHO05D004633 1.1e-13 83.6 204 33.8
BcaC01g06409 Brassica carinata HOM05D003788 ORTHO05D004633 1.4e-13 83.2 922 23.9
C03p15990 Brassica napus HOM05D003788 ORTHO05D004633 1.9e-13 82.8 915 23.7
CARHR269640 Cardamine hirsuta HOM05D003788 ORTHO05D004633 1.9e-13 82.8 895 24.0
HPP92_007487 Vanilla planifolia HOM05D003788 ORTHO05D004633 1.9e-13 82.8 144 36.1
BcaC04g20115 Brassica carinata HOM05D003788 ORTHO05D004633 2.4e-13 82.4 316 30.1
BolC9t57606H Brassica oleracea HOM05D003788 ORTHO05D004633 2.4e-13 82.4 316 30.1
BcaC03g14236 Brassica carinata HOM05D003788 ORTHO05D004633 1.2e-12 80.1 801 23.5
BraA03t10668Z Brassica rapa HOM05D003788 ORTHO05D004633 5.6e-10 71.2 931 23.2
SEGI_04749 Sequoiadendron giganteum HOM05D003788 ORTHO05D004633 1.6e-09 69.7 70 54.3
A10p13510 Brassica napus HOM05D003788 ORTHO05D004633 8.1e-09 67.4 172 33.7
unitig_749.g13705 Utricularia gibba HOM05D003788 ORTHO05D004633 2.4e-08 65.9 318 29.2
A03p13640 Brassica napus HOM05D003788 ORTHO05D004633 9.9e-07 60.5 946 22.5
CDE05G2211 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 8.4e-06 57.4 374 25.9


User provided reference genes

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