Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 1.2e-86 323.2 171 100.0
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 4.9e-35 151.8 173 52.6
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 6.2e-30 134.8 176 48.3
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 1.8e-29 133.3 182 49.5
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 1.8e-29 133.3 171 50.9
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 1.7e-27 126.7 187 46.0
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 2.9e-27 125.9 183 47.0
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 1.9e-26 123.2 184 47.8
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 2.4e-26 122.9 189 46.0
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 3.2e-26 122.5 181 47.0
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 7.1e-26 121.3 177 47.5
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 1.2e-25 120.6 200 41.0
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 1.6e-25 120.2 193 44.6
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.1e-25 119.8 178 45.5
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 7.9e-25 117.9 185 45.4
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 7.9e-25 117.9 182 44.5
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 1.0e-24 117.5 169 47.3
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 3.0e-24 115.9 171 44.4
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 5.1e-24 115.2 175 46.3
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 5.1e-24 115.2 174 43.7
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 6.7e-24 114.8 167 46.7
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.1e-23 114.0 168 44.6
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 1.5e-23 113.6 171 43.3
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 1.5e-23 113.6 196 41.8
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 1.5e-23 113.6 187 43.9
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 2.5e-23 112.8 179 45.8
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 3.3e-23 112.5 196 42.3
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 7.4e-23 111.3 204 41.7
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 7.4e-23 111.3 184 42.4
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 1.3e-22 110.5 181 42.5
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 1.3e-22 110.5 199 40.2
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 2.1e-22 109.8 175 41.1
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 3.7e-22 109.0 196 41.8
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 4.8e-22 108.6 196 40.8
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 1.4e-21 107.1 179 44.1
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.8e-21 106.7 178 41.6
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 2.4e-21 106.3 181 42.5
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 2.4e-21 106.3 198 41.9
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 5.3e-21 105.1 178 39.3
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 5.3e-21 105.1 192 41.1
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 5.3e-21 105.1 192 41.1
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 9.0e-21 104.4 192 39.1
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 9.0e-21 104.4 193 41.5
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 1.5e-20 103.6 172 41.9
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 2.6e-20 102.8 186 43.0
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 2.6e-20 102.8 179 41.3
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 2.6e-20 102.8 156 41.7
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 3.4e-20 102.4 170 41.8
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 4.5e-20 102.1 194 39.7
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 5.8e-20 101.7 165 40.6
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 7.6e-20 101.3 183 41.0
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 1.7e-19 100.1 166 43.4
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 2.9e-19 99.4 186 41.4
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 3.8e-19 99.0 202 39.1
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 6.5e-19 98.2 172 41.9
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 8.4e-19 97.8 202 38.1
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 8.4e-19 97.8 202 38.6
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 1.4e-18 97.1 196 39.3
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 1.4e-18 97.1 182 42.3
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 2.5e-18 96.3 193 39.4
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 3.2e-18 95.9 157 43.9
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 4.2e-18 95.5 148 43.9
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 1.2e-17 94.0 197 38.1
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 1.2e-17 94.0 184 40.2
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 1.6e-17 93.6 214 36.4
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.6e-17 93.6 195 37.9
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 1.6e-17 93.6 225 34.7
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 2.7e-17 92.8 186 38.7
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 1.0e-16 90.9 212 36.3
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 1.8e-16 90.1 173 41.6
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 1.8e-16 90.1 175 37.1
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 1.8e-16 90.1 191 37.7
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 8.7e-16 87.8 172 38.4
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.1e-15 87.4 177 39.5
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 1.9e-15 86.7 180 41.1
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 1.9e-15 86.7 192 38.0
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 5.7e-15 85.1 171 38.0
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 9.6e-15 84.3 228 35.1
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 1.3e-14 84.0 172 37.2
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.3e-14 84.0 138 45.7
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 1.3e-14 84.0 178 41.0
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 4.8e-14 82.0 185 36.8
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 4.8e-14 82.0 176 39.2
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 6.2e-14 81.6 178 37.6
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 1.5e-12 77.0 152 38.8
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 4.5e-12 75.5 173 35.8
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 2.2e-11 73.2 96 44.8
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 1.4e-10 70.5 195 33.3
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 5.5e-10 68.6 178 31.5
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 2.7e-09 66.2 124 39.5
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 4.6e-09 65.5 171 34.5
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 2.3e-08 63.2 72 50.0
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 5.1e-08 62.0 128 32.8
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 1.6e-06 57.0 130 31.5
unitig_44.g31557 Utricularia gibba HOM05D060702 ORTHO05D051509 4.8e-06 55.5 169 35.5
unitig_578.g16284 Utricularia gibba HOM05D060702 ORTHO05D051509 4.8e-06 55.5 169 35.5


User provided reference genes

Program Settings