Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12971 Avicennia marina HOM05D003074 ORTHO05D002434 2.2e-57 225.3 109 100.0
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 5.8e-13 77.8 117 41.0
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 2.9e-12 75.5 116 40.5
Lsat_1_v5_gn_9_93960 Lactuca sativa HOM05D003074 ORTHO05D002434 3.7e-12 75.1 118 41.5
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 8.3e-12 73.9 123 37.4
THA.LOC104812967 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 4.1e-11 71.6 123 38.2
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 7.0e-11 70.9 124 37.1
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 7.0e-11 70.9 119 37.8
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.6e-10 69.7 88 48.9
ClCG03G004770 Citrullus lanatus HOM05D003074 ORTHO05D002434 1.6e-10 69.7 116 39.7
Migut.H01829 Erythranthe guttata HOM05D003074 ORTHO05D002434 2.0e-10 69.3 130 40.8
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 3.5e-10 68.6 128 32.8
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 3.5e-10 68.6 122 39.3
Hma1.2p1_1091F.1_g255850 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 4.6e-10 68.2 58 55.2
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 6.0e-10 67.8 122 39.3
Dinv22264 Davidia involucrata HOM05D003074 ORTHO05D002434 6.0e-10 67.8 55 60.0
Oeu042936.1 Olea europaea HOM05D003074 ORTHO05D002434 6.0e-10 67.8 115 37.4
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 6.0e-10 67.8 111 39.6
vmacro03644 Vaccinium macrocarpon HOM05D003074 ORTHO05D002434 6.0e-10 67.8 117 36.8
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 7.8e-10 67.4 113 38.1
Migut.M01767 Erythranthe guttata HOM05D003074 ORTHO05D002434 7.8e-10 67.4 125 35.2
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 1.0e-09 67.0 120 35.8
Duzib192G0001 Durio zibethinus HOM05D003074 ORTHO05D002434 1.3e-09 66.6 114 37.7
ECA240G4169 Erigeron canadensis HOM05D003074 ORTHO05D002434 1.3e-09 66.6 59 57.6
Hma1.2p1_1162F.1_g262580 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.3e-09 66.6 58 53.4
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 1.7e-09 66.2 123 39.0
FAN08G3684 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.7e-09 66.2 127 37.8
FAN25G1645 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.7e-09 66.2 127 37.8
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.7e-09 66.2 120 38.3
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 1.7e-09 66.2 120 40.0
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 1.7e-09 66.2 113 38.9
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 2.3e-09 65.9 124 34.7
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 2.3e-09 65.9 114 36.8
FAN01G1682 Fragaria x ananassa HOM05D003074 ORTHO05D002434 3.0e-09 65.5 127 37.8
FAN26G1625 Fragaria x ananassa HOM05D003074 ORTHO05D002434 3.0e-09 65.5 127 37.8
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 3.0e-09 65.5 57 56.1
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 3.9e-09 65.1 127 40.9
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 3.9e-09 65.1 120 39.2
TAR627G0593 Trochodendron aralioides HOM05D003074 ORTHO05D002434 3.9e-09 65.1 79 45.6
CiPaw.11G189000 Carya illinoinensis HOM05D003074 ORTHO05D002434 5.0e-09 64.7 75 45.3
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 5.0e-09 64.7 125 37.6
Atru.chr2.3399 Acer truncatum HOM05D003074 ORTHO05D002434 8.6e-09 63.9 74 44.6
Ca_01715_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 8.6e-09 63.9 113 38.1
Ca_30684_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 8.6e-09 63.9 113 38.1
FvH4_3g02220 Fragaria vesca HOM05D003074 ORTHO05D002434 8.6e-09 63.9 127 37.0
MBI18_g22612_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 8.6e-09 63.9 114 39.5
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 1.1e-08 63.5 58 51.7
Gohir.D01G066350 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.1e-08 63.5 56 53.6
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 1.1e-08 63.5 113 37.2
Actinidia35342 Actinidia chinensis HOM05D003074 ORTHO05D002434 1.5e-08 63.2 62 51.6
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 1.5e-08 63.2 114 38.6
Medtr3g051510 Medicago truncatula HOM05D003074 ORTHO05D002434 1.5e-08 63.2 115 35.7
Medtr3g051610 Medicago truncatula HOM05D003074 ORTHO05D002434 1.5e-08 63.2 113 36.3
Oeu007582.1 Olea europaea HOM05D003074 ORTHO05D002434 1.5e-08 63.2 113 38.9
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.9e-08 62.8 120 36.7
EL10Ac4g07810 Beta vulgaris HOM05D003074 ORTHO05D002434 2.5e-08 62.4 112 32.1
Lalb_Chr15g0087561 Lupinus albus HOM05D008677 ORTHO05D002434 2.5e-08 62.4 120 35.0
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 3.3e-08 62.0 58 51.7
Cc09_g09730 Coffea canephora HOM05D003074 ORTHO05D002434 4.3e-08 61.6 137 35.0
ECA246G0494 Erigeron canadensis HOM05D003074 ORTHO05D002434 4.3e-08 61.6 115 40.0
Medtr3g051530 Medicago truncatula HOM05D003074 ORTHO05D002434 4.3e-08 61.6 115 35.7
Medtr3g051570 Medicago truncatula HOM05D003074 ORTHO05D002434 4.3e-08 61.6 58 55.2
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 5.6e-08 61.2 60 51.7
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 5.6e-08 61.2 60 51.7
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 5.6e-08 61.2 122 38.5
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 5.6e-08 61.2 122 38.5
Phvul.006G043100 Phaseolus vulgaris HOM05D003074 ORTHO05D002434 5.6e-08 61.2 66 50.0
Atru.chr2.3400 Acer truncatum HOM05D003074 ORTHO05D002434 7.3e-08 60.8 53 56.6
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 9.5e-08 60.5 123 36.6
TPR.G16595 Trifolium pratense HOM05D003074 ORTHO05D002434 9.5e-08 60.5 116 33.6
unitig_85.g27325 Utricularia gibba HOM05D003074 ORTHO05D002434 9.5e-08 60.5 114 36.0
Eucgr.E04062 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.2e-07 60.1 118 36.4
Glyma.18G096700 Glycine max HOM05D003074 ORTHO05D002434 1.2e-07 60.1 111 36.0
LjContig00272g0022666 Lotus japonicus HOM05D003074 ORTHO05D002434 1.6e-07 59.7 111 34.2
Atru.chr10.2213 Acer truncatum HOM05D003074 ORTHO05D002434 2.1e-07 59.3 65 50.8
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.1e-07 59.3 123 33.3
PGSC0003DMG400001089 Solanum tuberosum HOM05D003074 ORTHO05D002434 2.1e-07 59.3 60 46.7
Dinv13888 Davidia involucrata HOM05D003074 ORTHO05D002434 2.8e-07 58.9 105 39.0
Gohir.A01G079300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.8e-07 58.9 113 35.4
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 2.8e-07 58.9 115 34.8
THA.LOC104817856 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 2.8e-07 58.9 128 33.6
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 3.6e-07 58.5 117 35.0
Glyma.08G316000 Glycine max HOM05D003074 ORTHO05D002434 4.7e-07 58.2 56 55.4
Lj6g0015217 Lotus japonicus HOM05D003074 ORTHO05D002434 4.7e-07 58.2 59 54.2
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 4.7e-07 58.2 113 31.0
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 6.2e-07 57.8 124 31.5
Eucgr.F03465 Eucalyptus grandis HOM05D003074 ORTHO05D002434 6.2e-07 57.8 126 36.5
RcHm_v2.0_Chr5g0003291 Rosa chinensis HOM05D003074 ORTHO05D002434 8.0e-07 57.4 126 32.5
CiPaw.10G070500 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.1e-06 57.0 78 43.6
Manes.17G038600 Manihot esculenta HOM05D003074 ORTHO05D002434 1.1e-06 57.0 122 35.2
TAR624G0488 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.1e-06 57.0 102 34.3
BraA05t21736Z Brassica rapa HOM05D010457 ORTHO05D002434 1.4e-06 56.6 113 32.7
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 1.4e-06 56.6 120 33.3
Aqoxy1G02178 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 1.8e-06 56.2 116 33.6
MBI02_g40709_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 1.8e-06 56.2 120 34.2
PGR004G0474 Punica granatum HOM05D003074 ORTHO05D002434 1.8e-06 56.2 124 37.9
VMungo0540G1774 Vigna mungo HOM05D008677 ORTHO05D002434 1.8e-06 56.2 131 32.8
CDE02G3016 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 2.3e-06 55.8 70 41.4
Aqoxy1G02176 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 3.1e-06 55.5 116 34.5
Lsat_1_v5_gn_5_6000 Lactuca sativa HOM05D003074 ORTHO05D002434 3.1e-06 55.5 64 51.6
Medtr5g092710 Medicago truncatula HOM05D003074 ORTHO05D002434 3.1e-06 55.5 57 40.4
Sp7g20110 Schrenkiella parvula HOM05D003074 ORTHO05D002434 3.1e-06 55.5 121 34.7
Lalb_Chr15g0081141 Lupinus albus HOM05D003074 ORTHO05D002434 4.0e-06 55.1 58 46.6
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 4.0e-06 55.1 122 35.2
PGR031G1144 Punica granatum HOM05D003074 ORTHO05D002434 4.0e-06 55.1 115 34.8
Rhsim13G0146000 Rhododendron simsii HOM05D002761 ORTHO05D003351 4.0e-06 55.1 118 33.9
RhsimUnG0109700 Rhododendron simsii HOM05D003074 ORTHO05D002434 4.0e-06 55.1 118 33.9
PGSC0003DMG400032292 Solanum tuberosum HOM05D003074 ORTHO05D002434 4.0e-06 55.1 57 50.9
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 6.8e-06 54.3 121 33.9
ClCG05G014310 Citrullus lanatus HOM05D003074 ORTHO05D002434 6.8e-06 54.3 56 51.8
Glyma.02G290900 Glycine max HOM05D003074 ORTHO05D002434 6.8e-06 54.3 110 37.3
Glyma.15G107300 Glycine max HOM05D008677 ORTHO05D002434 6.8e-06 54.3 132 35.6
Rhsim06G0216700 Rhododendron simsii HOM05D003074 ORTHO05D002434 6.8e-06 54.3 65 47.7
PGSC0003DMG400029820 Solanum tuberosum HOM05D003074 ORTHO05D002434 6.8e-06 54.3 57 49.1
TWI38G1232 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 6.8e-06 54.3 134 35.1
MELO3C025367.2 Cucumis melo HOM05D003074 ORTHO05D002434 8.9e-06 53.9 59 50.8
Gohir.A10G013000 Gossypium hirsutum HOM05D003074 ORTHO05D002434 8.9e-06 53.9 116 31.0
PGSC0003DMG400031876 Solanum tuberosum HOM05D003074 ORTHO05D002434 8.9e-06 53.9 57 50.9


User provided reference genes

Program Settings