Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 5.4e-81 304.3 157 100.0
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 1.3e-42 176.8 164 62.2
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 1.3e-42 176.8 170 63.5
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 2.9e-42 175.6 157 67.5
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 2.9e-42 175.6 123 77.2
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 4.2e-41 171.8 160 63.1
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 9.4e-41 170.6 101 83.2
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 1.2e-40 170.2 100 86.0
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 3.6e-40 168.7 121 75.2
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 6.1e-40 167.9 124 73.4
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 7.9e-40 167.5 125 72.8
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 1.8e-39 166.4 160 63.1
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 5.2e-39 164.9 161 59.6
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 6.7e-39 164.5 99 82.8
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 8.8e-39 164.1 127 70.1
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 2.0e-38 162.9 133 66.2
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 3.3e-38 162.2 100 81.0
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 4.4e-38 161.8 92 87.0
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 9.7e-38 160.6 100 80.0
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 9.7e-38 160.6 92 83.7
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 9.7e-38 160.6 162 58.0
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 1.3e-37 160.2 124 68.5
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 2.8e-37 159.1 162 58.6
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 2.8e-37 159.1 108 74.1
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 3.7e-37 158.7 121 69.4
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 4.8e-37 158.3 128 68.0
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 6.3e-37 157.9 118 72.0
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 6.3e-37 157.9 118 72.0
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 6.3e-37 157.9 92 84.8
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 6.3e-37 157.9 170 52.9
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 8.2e-37 157.5 152 59.9
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 8.2e-37 157.5 92 84.8
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 1.1e-36 157.1 155 57.4
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 1.1e-36 157.1 139 62.6
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 1.1e-36 157.1 138 65.2
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 1.4e-36 156.8 92 82.6
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 1.4e-36 156.8 149 59.1
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 1.8e-36 156.4 92 81.5
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 3.1e-36 155.6 114 71.9
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 4.1e-36 155.2 173 55.5
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 4.1e-36 155.2 136 64.0
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 4.1e-36 155.2 101 75.2
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 5.3e-36 154.8 166 53.0
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 7.0e-36 154.5 145 59.3
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 1.2e-35 153.7 92 79.3
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 1.6e-35 153.3 116 69.0
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 2.0e-35 152.9 139 58.3
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 2.6e-35 152.5 108 73.1
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 2.6e-35 152.5 166 54.2
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 2.6e-35 152.5 166 54.2
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 5.9e-35 151.4 101 75.2
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 5.9e-35 151.4 151 54.3
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 5.9e-35 151.4 130 62.3
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 7.7e-35 151.0 111 69.4
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 7.7e-35 151.0 168 53.6
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 1.0e-34 150.6 92 78.3
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 1.3e-34 150.2 116 66.4
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 1.3e-34 150.2 114 70.2
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 1.3e-34 150.2 152 58.6
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 1.3e-34 150.2 169 55.6
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 1.7e-34 149.8 119 66.4
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 2.2e-34 149.4 92 82.6
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.9e-34 149.1 166 54.2
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 2.9e-34 149.1 114 66.7
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 3.8e-34 148.7 110 72.7
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 5.0e-34 148.3 96 76.0
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 6.5e-34 147.9 166 53.6
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 6.5e-34 147.9 166 52.4
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 8.5e-34 147.5 112 67.9
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 8.5e-34 147.5 112 67.9
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.1e-33 147.1 114 65.8
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.1e-33 147.1 114 65.8
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 1.1e-33 147.1 126 63.5
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 1.1e-33 147.1 160 54.4
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 1.1e-33 147.1 160 54.4
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 1.5e-33 146.7 160 53.1
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 1.9e-33 146.4 144 55.6
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 1.9e-33 146.4 116 65.5
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 2.5e-33 146.0 112 67.9
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 3.2e-33 145.6 100 75.0
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 7.2e-33 144.4 96 74.0
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 3.6e-32 142.1 124 58.9
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 3.6e-32 142.1 133 57.9
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 4.7e-32 141.7 124 62.1
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 4.7e-32 141.7 138 56.5
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 5.2e-31 138.3 157 55.4
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.7e-29 133.3 131 54.2
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 8.2e-29 131.0 111 60.4
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 3.1e-28 129.0 71 87.3
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 1.6e-27 126.7 77 80.5
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 5.9e-27 124.8 147 46.9
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 8.5e-26 120.9 128 51.6
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 1.4e-23 113.6 64 84.4
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 2.6e-22 109.4 64 81.2
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 4.4e-22 108.6 63 81.0
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 4.4e-22 108.6 75 70.7
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.7e-21 106.7 62 80.6
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 1.7e-21 106.7 75 69.3
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.9e-17 93.2 70 62.9


User provided reference genes

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