Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12841 Avicennia marina HOM05D006899 ORTHO05D008566 2.3e-91 339.0 180 100.0
SalBow7G1887 Salvia bowleyana HOM05D006899 ORTHO05D008566 1.3e-65 253.4 187 77.5
SGA_v2.0_scaffold4G02123 Striga asiatica HOM05D006899 ORTHO05D008566 4.5e-63 245.0 187 73.3
Migut.E01772 Erythranthe guttata HOM05D006899 ORTHO05D008566 1.1e-56 223.8 184 70.7
Oeu013822.1 Olea europaea HOM05D006899 ORTHO05D008566 1.7e-54 216.5 188 68.6
Oeu020934.1 Olea europaea HOM05D006899 ORTHO05D008566 1.7e-54 216.5 187 66.8
Peaxi162Scf00111g00221 Petunia axillaris HOM05D006899 ORTHO05D008566 1.8e-51 206.5 186 67.7
Nitab4.5_0002251g0050 Nicotiana tabacum HOM05D006899 ORTHO05D008566 3.0e-51 205.7 188 66.5
Nitab4.5_0001883g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 6.7e-51 204.5 143 78.3
Gohir.D07G086300 Gossypium hirsutum HOM05D006899 ORTHO05D008566 2.0e-50 203.0 186 65.1
PGSC0003DMG400017304 Solanum tuberosum HOM05D006899 ORTHO05D008566 1.3e-49 200.3 187 64.2
Gorai.001G092300 Gossypium raimondii HOM05D006899 ORTHO05D008566 2.2e-49 199.5 186 65.6
Gohir.A07G080700 Gossypium hirsutum HOM05D006899 ORTHO05D008566 8.2e-49 197.6 186 62.9
Sopen07g029600 Solanum pennellii HOM05D006899 ORTHO05D008566 8.2e-49 197.6 144 76.4
Potri.002G058000 Populus trichocarpa HOM05D006899 ORTHO05D008566 1.1e-48 197.2 192 63.5
CiPaw.04G138700 Carya illinoinensis HOM05D006899 ORTHO05D008566 1.4e-48 196.8 187 63.6
Cfa023072 Carpinus fangiana HOM05D006899 ORTHO05D008566 2.4e-48 196.1 151 74.8
Potri.005G204200 Populus trichocarpa HOM05D006899 ORTHO05D008566 3.1e-48 195.7 187 66.8
Solyc07g056240.3 Solanum lycopersicum HOM05D006899 ORTHO05D008566 3.1e-48 195.7 144 75.0
QL08p044873 Quercus lobata HOM05D006899 ORTHO05D008566 4.1e-48 195.3 186 64.5
Phvul.008G193700 Phaseolus vulgaris HOM05D006899 ORTHO05D008566 7.0e-48 194.5 186 62.9
VMungo0647G1903 Vigna mungo HOM05D006899 ORTHO05D008566 7.0e-48 194.5 186 62.4
Cc05_g09700 Coffea canephora HOM05D006899 ORTHO05D008566 1.6e-47 193.4 183 64.5
LjContig00049g0021241 Lotus japonicus HOM05D006899 ORTHO05D008566 2.6e-47 192.6 186 61.8
FAN09G4704 Fragaria x ananassa HOM05D006899 ORTHO05D008566 4.5e-47 191.8 185 62.7
Glyma.14G029700 Glycine max HOM05D006899 ORTHO05D008566 4.5e-47 191.8 186 62.4
Nn4g26539 Nelumbo nucifera HOM05D006899 ORTHO05D008566 4.5e-47 191.8 201 61.2
PGR042G1005 Punica granatum HOM05D006899 ORTHO05D008566 5.9e-47 191.4 173 67.1
FAN05G4631 Fragaria x ananassa HOM05D006899 ORTHO05D008566 1.0e-46 190.7 185 61.6
MELO3C026968.2 Cucumis melo HOM05D006899 ORTHO05D008566 1.3e-46 190.3 144 74.3
Rhsim04G0081600 Rhododendron simsii HOM05D006899 ORTHO05D008566 1.7e-46 189.9 145 75.2
TAR627G0648 Trochodendron aralioides HOM05D006899 ORTHO05D008566 1.7e-46 189.9 187 59.4
FvH4_6g38570 Fragaria vesca HOM05D006899 ORTHO05D008566 2.2e-46 189.5 185 61.6
vmacro09192 Vaccinium macrocarpon HOM05D006899 ORTHO05D008566 2.2e-46 189.5 190 64.2
CsaV3_4G031920 Cucumis sativus L. HOM05D006899 ORTHO05D008566 2.9e-46 189.1 144 73.6
Glyma.02G285100 Glycine max HOM05D006899 ORTHO05D008566 1.1e-45 187.2 186 62.4
GSVIVG01020847001 Vitis vinifera HOM05D006899 ORTHO05D008566 1.1e-45 187.2 194 62.4
MD17G1136600 Malus domestica HOM05D006899 ORTHO05D008566 1.5e-45 186.8 146 71.9
MD09G1149700 Malus domestica HOM05D006899 ORTHO05D008566 7.2e-45 184.5 194 61.9
Sed0025977 Sechium edule HOM05D006899 ORTHO05D008566 7.2e-45 184.5 143 72.7
Thecc.01G170200 Theobroma cacao HOM05D006899 ORTHO05D008566 1.6e-44 183.3 166 66.3
COL.COLO4_08896 Corchorus olitorius HOM05D006899 ORTHO05D008566 2.1e-44 183.0 155 71.6
arahy.Tifrunner.gnm1.ann1.226PX6 Arachis hypogaea HOM05D006899 ORTHO05D008566 2.7e-44 182.6 191 61.3
arahy.Tifrunner.gnm1.ann1.SNQ1P9 Arachis hypogaea HOM05D006899 ORTHO05D008566 3.6e-44 182.2 191 60.7
Medtr5g091190 Medicago truncatula HOM05D006899 ORTHO05D008566 3.6e-44 182.2 159 65.4
TWI59G0652 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 3.6e-44 182.2 191 60.7
Cpa.g.sc50.104 Carica papaya HOM05D006899 ORTHO05D008566 4.7e-44 181.8 147 72.1
RcHm_v2.0_Chr2g0151981 Rosa chinensis HOM05D006899 ORTHO05D008566 4.7e-44 181.8 151 68.9
Haze_13530 Corylus avellana HOM05D006899 ORTHO05D008566 6.1e-44 181.4 128 78.9
Hund24233 Selenicereus undatus HOM05D006899 ORTHO05D008566 1.0e-43 180.6 186 60.2
CANSAT64G2357 Cannabis sativa HOM05D006899 ORTHO05D008566 3.0e-43 179.1 147 69.4
TPR.G12679 Trifolium pratense HOM05D006899 ORTHO05D008566 3.0e-43 179.1 149 67.1
Prupe.3G176400 Prunus persica HOM05D006899 ORTHO05D008566 5.2e-43 178.3 196 59.7
Sabra02G0047300 Salix brachista HOM05D006899 ORTHO05D008566 6.7e-43 177.9 190 60.5
Manes.10G088300 Manihot esculenta HOM05D006899 ORTHO05D008566 1.5e-42 176.8 196 58.7
Sp4g25100 Schrenkiella parvula HOM05D006899 ORTHO05D008566 3.3e-42 175.6 153 70.6
Ciclev10032884m.g Citrus clementina HOM05D006899 ORTHO05D008566 4.4e-42 175.3 190 56.8
Atru.chr6.2058 Acer truncatum HOM05D006899 ORTHO05D008566 7.5e-42 174.5 186 59.7
Aa31LG1G24750 Aethionema arabicum HOM05D006899 ORTHO05D008566 7.5e-42 174.5 185 60.0
AUR62015134 Chenopodium quinoa HOM05D006899 ORTHO05D008566 7.5e-42 174.5 172 64.5
Actinidia03641 Actinidia chinensis HOM05D006899 ORTHO05D008566 1.3e-41 173.7 125 76.8
BraA04t18701Z Brassica rapa HOM05D006899 ORTHO05D008566 1.3e-41 173.7 196 58.7
FAN02G3475 Fragaria x ananassa HOM05D006899 ORTHO05D008566 2.2e-41 172.9 220 53.2
THA.LOC104802283 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 6.3e-41 171.4 155 65.8
ClCG11G016470 Citrullus lanatus HOM05D006899 ORTHO05D008566 8.2e-41 171.0 145 68.3
AT2G42975 Arabidopsis thaliana HOM05D006899 ORTHO05D008566 1.8e-40 169.9 117 80.3
Sc13g0007020 Simmondsia chinensis HOM05D006899 ORTHO05D008566 4.1e-40 168.7 150 66.7
BcaC02g07213 Brassica carinata HOM05D006899 ORTHO05D008566 7.0e-40 167.9 142 70.4
C04p70000 Brassica napus HOM05D006899 ORTHO05D008566 7.0e-40 167.9 142 70.4
BolC4t28500H Brassica oleracea HOM05D006899 ORTHO05D008566 7.0e-40 167.9 142 70.4
CARHR138030 Cardamine hirsuta HOM05D006899 ORTHO05D008566 7.0e-40 167.9 155 65.8
AUR62017595 Chenopodium quinoa HOM05D006899 ORTHO05D008566 1.2e-39 167.2 172 61.6
Lalb_Chr04g0248871 Lupinus albus HOM05D006899 ORTHO05D008566 2.0e-39 166.4 98 85.7
AL4G41610 Arabidopsis lyrata HOM05D006899 ORTHO05D008566 2.7e-39 166.0 117 79.5
THA.LOC104803370 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 2.7e-39 166.0 138 68.8
Eucgr.A02015 Eucalyptus grandis HOM05D006899 ORTHO05D008566 3.5e-39 165.6 163 63.8
EL10Ac9g22843 Beta vulgaris HOM05D006899 ORTHO05D008566 4.5e-39 165.2 151 65.6
BcaB06g29274 Brassica carinata HOM05D006899 ORTHO05D008566 5.9e-39 164.9 121 76.0
BNapus_Darmor_BZH_scaffold_64p00160 Brassica napus HOM05D006899 ORTHO05D008566 5.9e-39 164.9 118 78.8
FAN14G2046 Fragaria x ananassa HOM05D006899 ORTHO05D008566 5.9e-39 164.9 122 73.0
Duzib138G0065 Durio zibethinus HOM05D006899 ORTHO05D008566 7.7e-39 164.5 173 59.5
CSS0032532 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 6.5e-38 161.4 187 55.6
Carub.0004s2544 Capsella rubella HOM05D006899 ORTHO05D008566 6.5e-38 161.4 119 75.6
Thhalv10017256m.g Eutrema salsugineum HOM05D006899 ORTHO05D008566 1.9e-37 159.8 119 75.6
Aqoxy1G02918 Aquilegia oxysepala HOM05D006899 ORTHO05D008566 2.1e-36 156.4 144 63.9
Dinv09142 Davidia involucrata HOM05D006899 ORTHO05D008566 3.6e-36 155.6 171 56.7
HanXRQChr17g0554721 Helianthus annuus HOM05D006899 ORTHO05D008566 3.6e-36 155.6 163 59.5
MBI10_g21113_MAGBIO Magnolia biondii HOM05D006899 ORTHO05D008566 8.0e-36 154.5 194 54.1
Lj1P601T16 Lonicera japonica HOM05D006899 ORTHO05D008566 1.5e-34 150.2 87 86.2
ECA233G0523 Erigeron canadensis HOM05D006899 ORTHO05D008566 2.6e-34 149.4 141 64.5
Lsat_1_v5_gn_8_137860 Lactuca sativa HOM05D006899 ORTHO05D008566 4.4e-34 148.7 154 55.2
Ah.01g013620 Amaranthus hybridus HOM05D006899 ORTHO05D008566 1.3e-33 147.1 101 77.2
Duzib133G1045 Durio zibethinus HOM05D006899 ORTHO05D008566 1.6e-31 140.2 135 58.5
CSS0025344 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 1.3e-30 137.1 189 50.3
PSO478G1301 Papaver somniferum HOM05D006899 ORTHO05D008566 7.2e-29 131.3 140 60.7
PSO675G8667 Papaver somniferum HOM05D006899 ORTHO05D008566 7.2e-29 131.3 140 60.7
unitig_60.g25592 Utricularia gibba HOM05D006899 ORTHO05D008566 9.5e-29 131.0 130 61.5
Os01g0666600 Oryza sativa ssp. japonica HOM05D006899 ORTHO05D008566 4.0e-27 125.6 154 51.3
HPP92_010055 Vanilla planifolia HOM05D006899 ORTHO05D008566 8.8e-27 124.4 119 58.8
PSO541G6147 Papaver somniferum HOM05D006899 ORTHO05D008566 2.0e-26 123.2 121 62.8
Nitab4.5_0004243g0030 Nicotiana tabacum HOM05D006899 ORTHO05D008566 9.8e-26 120.9 86 76.7
Hund24244 Selenicereus undatus HOM05D006899 ORTHO05D008566 4.9e-25 118.6 97 68.0
ATR0585G139 Amborella trichopoda HOM05D006899 ORTHO05D008566 6.3e-25 118.2 124 55.6
CDE05G0801 Ceratophyllum demersum HOM05D006899 ORTHO05D008566 1.8e-24 116.7 154 50.0
Zm00001eb157430 Zea mays HOM05D006899 ORTHO05D008566 2.4e-24 116.3 195 41.0
Nitab4.5_0004950g0010 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.0e-23 113.2 84 75.0
Nitab4.5_0009604g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.0e-23 113.2 84 75.0
Pp3c13_6560 Physcomitrium patens HOM05D006899 ORTHO05D008566 1.4e-19 100.5 144 43.8
Mapoly0120s0054 Marchantia polymorpha HOM05D006899 ORTHO05D008566 1.5e-18 97.1 135 45.9
Nitab4.5_0002251g0080 Nicotiana tabacum HOM05D006899 ORTHO05D008566 5.7e-18 95.1 91 58.2
TWI23G0441 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 2.9e-17 92.8 130 50.8
AagrBONN_evm.TU.Sc2ySwM_368.298 Anthoceros agrestis HOM05D006899 ORTHO05D008566 8.3e-17 91.3 116 47.4
Medtr5g016040 Medicago truncatula HOM05D006899 ORTHO05D008566 3.3e-13 79.3 80 56.2
SMO353G0201 Selaginella moellendorffii HOM05D006899 ORTHO05D008566 2.6e-10 69.7 90 45.6
Medtr7g035145 Medicago truncatula HOM05D006899 ORTHO05D008566 8.3e-09 64.7 69 42.0


User provided reference genes

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