Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 5.0e-232 807.4 393 100.0
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 3.9e-160 568.5 395 71.1
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 5.8e-140 501.5 338 69.8
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 3.8e-139 498.8 351 67.8
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 6.0e-137 491.5 371 65.5
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 1.0e-136 490.7 353 66.0
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 2.3e-136 489.6 332 69.9
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 7.4e-135 484.6 335 69.6
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 4.8e-134 481.9 331 68.9
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 6.2e-134 481.5 392 61.5
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 8.1e-134 481.1 388 59.5
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 1.1e-133 480.7 338 67.2
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 5.3e-133 478.4 395 62.3
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 1.2e-132 477.2 360 65.6
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 1.5e-132 476.9 335 66.9
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 1.5e-132 476.9 391 61.1
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 2.0e-132 476.5 335 67.8
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 5.8e-132 474.9 335 67.5
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 7.6e-132 474.6 345 67.2
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 7.6e-132 474.6 354 63.0
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 1.3e-131 473.8 360 61.1
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.3e-131 473.8 335 67.5
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 2.2e-131 473.0 388 62.1
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 4.9e-131 471.9 351 65.0
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 1.1e-130 470.7 330 68.2
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 4.2e-130 468.8 339 66.1
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 9.3e-130 467.6 376 60.1
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 2.1e-129 466.5 330 66.1
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 2.7e-129 466.1 328 68.0
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 2.7e-129 466.1 331 64.4
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 2.7e-129 466.1 336 64.9
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 1.3e-128 463.8 339 66.1
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 2.3e-128 463.0 351 63.5
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 3.0e-128 462.6 330 67.3
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 3.9e-128 462.2 345 66.1
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 3.9e-128 462.2 353 65.2
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 1.9e-127 459.9 332 65.1
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 4.3e-127 458.8 336 64.9
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 4.3e-127 458.8 329 67.8
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 4.3e-127 458.8 346 65.0
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 7.4e-127 458.0 335 66.3
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 9.6e-127 457.6 363 63.4
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 1.6e-126 456.8 331 65.9
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 4.8e-126 455.3 361 62.0
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 6.2e-126 454.9 399 57.1
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 2.4e-125 453.0 335 66.0
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 4.0e-125 452.2 331 65.3
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 4.0e-125 452.2 326 66.6
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 1.2e-124 450.7 335 66.6
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 2.0e-124 449.9 353 62.9
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 1.7e-123 446.8 325 66.5
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 3.8e-123 445.7 388 56.4
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 2.5e-122 443.0 331 63.1
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 2.5e-122 443.0 331 63.1
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 9.3e-122 441.0 326 61.7
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 9.3e-122 441.0 365 57.5
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 2.1e-121 439.9 331 63.1
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 7.9e-121 438.0 331 63.1
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 5.1e-120 435.3 331 62.2
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 5.1e-120 435.3 331 62.2
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 1.6e-118 430.3 331 61.9
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 1.6e-118 430.3 367 58.0
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 2.1e-118 429.9 351 59.5
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 2.8e-118 429.5 331 62.2
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 6.3e-118 428.3 331 61.9
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 8.2e-118 427.9 351 60.4
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 1.4e-117 427.2 332 61.1
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 3.1e-117 426.0 365 58.4
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 3.1e-117 426.0 325 61.5
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 5.3e-117 425.2 329 61.4
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 1.3e-115 420.6 336 61.6
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 2.9e-115 419.5 439 51.3
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 8.5e-115 417.9 355 60.8
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 1.6e-113 413.7 333 59.2
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 1.1e-111 407.5 347 60.5
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 1.9e-111 406.8 357 56.3
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 1.1e-109 401.0 337 57.9
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 7.7e-108 394.8 303 65.0
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 1.2e-105 387.5 358 53.4
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 1.6e-105 387.1 343 56.6
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 2.1e-105 386.7 383 53.5
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 5.7e-103 378.6 537 41.9
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 5.7e-103 378.6 348 55.7
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 9.7e-103 377.9 421 51.5
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 2.2e-102 376.7 279 64.2
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 2.4e-101 373.2 380 53.4
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 9.1e-101 371.3 287 60.3
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 9.1e-101 371.3 289 63.0
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 1.0e-99 367.9 334 57.8
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 1.5e-95 354.0 260 64.2
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 5.7e-95 352.1 343 52.8
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 5.9e-92 342.0 294 59.5
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 1.1e-90 337.8 242 65.3
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 1.2e-87 327.8 279 57.3
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 3.8e-83 312.8 316 50.0
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 3.4e-79 299.7 318 47.2
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 6.3e-78 295.4 228 64.9
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 4.1e-77 292.7 331 47.7
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.4e-72 277.7 263 50.6
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 1.8e-69 267.3 272 47.4
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 3.5e-68 263.1 177 67.2
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 1.2e-55 221.5 330 38.2
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 4.7e-41 172.9 195 50.3
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 1.1e-32 145.2 101 71.3
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.9e-29 134.4 78 78.2
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 3.6e-25 120.2 91 68.1
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 3.8e-22 110.2 110 56.4
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 6.7e-19 99.4 75 66.7
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 6.4e-14 82.8 59 69.5
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 4.2e-13 80.1 97 46.4
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.8e-09 67.4 46 63.0
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.1e-08 65.5 37 75.7


User provided reference genes

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