Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12812 Avicennia marina HOM05D004493 ORTHO05D005117 5.5e-78 294.3 152 100.0
Migut.N00529 Erythranthe guttata HOM05D004493 ORTHO05D005117 2.8e-50 202.2 139 71.9
Oeu023963.1 Olea europaea HOM05D004493 ORTHO05D005117 8.5e-47 190.7 148 68.9
SalBow3G2955 Salvia bowleyana HOM05D004493 ORTHO05D005117 1.4e-41 173.3 136 71.3
Solyc02g032490.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 5.3e-41 171.4 133 68.4
Nitab4.5_0000890g0180 Nicotiana tabacum HOM05D004493 ORTHO05D005117 9.1e-41 170.6 133 67.7
Sopen02g010770 Solanum pennellii HOM05D004493 ORTHO05D005117 9.1e-41 170.6 134 67.2
CAN.G215.14 Capsicum annuum HOM05D004493 ORTHO05D005117 1.2e-40 170.2 133 69.9
Nitab4.5_0000075g0180 Nicotiana tabacum HOM05D004493 ORTHO05D005117 5.9e-40 167.9 133 66.2
SGA_v2.0_scaffold6G03332 Striga asiatica HOM05D004493 ORTHO05D005117 8.5e-39 164.1 148 63.5
Lsat_1_v5_gn_1_71321 Lactuca sativa HOM05D004493 ORTHO05D005117 1.9e-38 162.9 132 63.6
Cc01_g00330 Coffea canephora HOM05D004493 ORTHO05D005117 6.7e-36 154.5 137 60.6
Rhsim13G0209100 Rhododendron simsii HOM05D004493 ORTHO05D005117 2.0e-35 152.9 138 55.8
Dinv06245 Davidia involucrata HOM05D004493 ORTHO05D005117 3.3e-35 152.1 132 60.6
Dinv15519 Davidia involucrata HOM05D004493 ORTHO05D005117 3.3e-35 152.1 132 60.6
CiPaw.13G180100 Carya illinoinensis HOM05D004493 ORTHO05D005117 2.8e-34 149.1 134 58.2
Haze_22920 Corylus avellana HOM05D004493 ORTHO05D005117 2.8e-34 149.1 144 54.2
Cfa009530 Carpinus fangiana HOM05D004493 ORTHO05D005117 8.2e-34 147.5 144 52.8
Actinidia00919 Actinidia chinensis HOM05D004493 ORTHO05D005117 1.4e-33 146.7 142 54.9
Hma1.2p1_0589F.1_g184760 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 1.4e-33 146.7 138 55.1
CSS0040729 Camellia sinensis var. sinensis HOM05D004493 ORTHO05D005117 3.1e-33 145.6 139 58.3
arahy.Tifrunner.gnm1.ann1.578M4A Arachis hypogaea HOM05D004493 ORTHO05D005117 2.7e-32 142.5 138 52.9
arahy.Tifrunner.gnm1.ann1.M9LRNQ Arachis hypogaea HOM05D004493 ORTHO05D005117 2.7e-32 142.5 138 52.9
Prupe.6G001200 Prunus persica HOM05D004493 ORTHO05D005117 4.5e-32 141.7 137 54.7
TAR623G0338 Trochodendron aralioides HOM05D004493 ORTHO05D005117 2.2e-31 139.4 131 58.0
QL01p007857 Quercus lobata HOM05D004493 ORTHO05D005117 2.9e-31 139.0 133 56.4
Rhsim10G0100200 Rhododendron simsii HOM05D004493 ORTHO05D005117 2.9e-31 139.0 132 53.0
PSO384G0423 Papaver somniferum HOM05D004493 ORTHO05D005117 3.8e-31 138.7 132 58.3
MD11G1001000 Malus domestica HOM05D004493 ORTHO05D005117 5.0e-31 138.3 137 53.3
DCAR_024091 Daucus carota HOM05D004493 ORTHO05D005117 8.5e-31 137.5 133 58.6
RcHm_v2.0_Chr5g0084071 Rosa chinensis HOM05D004493 ORTHO05D005117 8.5e-31 137.5 132 56.8
PGR119G2408 Punica granatum HOM05D004493 ORTHO05D005117 1.5e-30 136.7 137 51.1
THA.LOC104822690 Tarenaya hassleriana HOM05D004493 ORTHO05D005117 2.5e-30 136.0 131 53.4
unitig_0.g1239 Utricularia gibba HOM05D004493 ORTHO05D005117 2.5e-30 136.0 157 49.0
Lalb_Chr13g0295751 Lupinus albus HOM05D004493 ORTHO05D005117 3.2e-30 135.6 142 50.0
Nn7g36938 Nelumbo nucifera HOM05D004493 ORTHO05D005117 7.2e-30 134.4 131 55.0
Sed0013310 Sechium edule HOM05D004493 ORTHO05D005117 7.2e-30 134.4 131 55.7
Hund05058 Selenicereus undatus HOM05D004493 ORTHO05D005117 1.2e-29 133.7 131 51.9
ECA248G0177 Erigeron canadensis HOM05D004493 ORTHO05D000562 1.6e-29 133.3 132 54.5
COL.COLO4_35067 Corchorus olitorius HOM05D004493 ORTHO05D005117 3.6e-29 132.1 132 53.8
CsaV3_5G029430 Cucumis sativus L. HOM05D004493 ORTHO05D005117 1.4e-28 130.2 132 55.3
TWI34G1214 Tripterygium wilfordii HOM05D004493 ORTHO05D005117 1.4e-28 130.2 144 53.5
MBI04_g11451_MAGBIO Magnolia biondii HOM05D004493 ORTHO05D005117 3.0e-28 129.0 133 55.6
MELO3C011789.2 Cucumis melo HOM05D004493 ORTHO05D005117 4.0e-28 128.6 133 53.4
BcaNung06979 Brassica carinata HOM05D004493 ORTHO05D005117 6.8e-28 127.9 130 47.7
Glyma.06G239100 Glycine max HOM05D004493 ORTHO05D005117 6.8e-28 127.9 127 52.0
ClCG11G012960 Citrullus lanatus HOM05D004493 ORTHO05D005117 8.8e-28 127.5 132 53.8
Thecc.09G205800 Theobroma cacao HOM05D004493 ORTHO05D005117 8.8e-28 127.5 132 52.3
Thhalv10011181m.g Eutrema salsugineum HOM05D004493 ORTHO05D005117 2.0e-27 126.3 131 49.6
Glyma.18G007300 Glycine max HOM05D004493 ORTHO05D005117 2.6e-27 125.9 127 51.2
AUR62015878 Chenopodium quinoa HOM05D004493 ORTHO05D005117 3.4e-27 125.6 134 48.5
Gohir.D08G092400 Gossypium hirsutum HOM05D004493 ORTHO05D005117 3.4e-27 125.6 133 51.1
Gorai.004G097900 Gossypium raimondii HOM05D004493 ORTHO05D005117 3.4e-27 125.6 133 51.1
FAN16G3321 Fragaria x ananassa HOM05D004493 ORTHO05D005117 4.4e-27 125.2 136 52.2
Lj5g0011313 Lotus japonicus HOM05D004493 ORTHO05D005117 5.7e-27 124.8 127 52.0
Potri.003G223400 Populus trichocarpa HOM05D004493 ORTHO05D005117 5.7e-27 124.8 141 51.1
FAN11G0901 Fragaria x ananassa HOM05D004493 ORTHO05D005117 9.8e-27 124.0 136 51.5
FAN11G3847 Fragaria x ananassa HOM05D004493 ORTHO05D005117 9.8e-27 124.0 146 49.3
FAN21G4070 Fragaria x ananassa HOM05D004493 ORTHO05D005117 9.8e-27 124.0 136 51.5
EL10Ac4g07695 Beta vulgaris HOM05D004493 ORTHO05D005117 1.3e-26 123.6 131 49.6
Peaxi162Scf00186g01613 Petunia axillaris HOM05D004493 ORTHO05D005117 1.3e-26 123.6 138 54.3
FvH4_3g45960 Fragaria vesca HOM05D004493 ORTHO05D005117 1.7e-26 123.2 136 50.7
Manes.15G110800 Manihot esculenta HOM05D004493 ORTHO05D005117 2.2e-26 122.9 137 49.6
Sp1g41160 Schrenkiella parvula HOM05D004493 ORTHO05D005117 2.8e-26 122.5 131 48.1
A08p00540 Brassica napus HOM05D004493 ORTHO05D005117 3.7e-26 122.1 131 45.8
Carub.0001s4405 Capsella rubella HOM05D004493 ORTHO05D005117 3.7e-26 122.1 131 48.1
CDE02G2692 Ceratophyllum demersum HOM05D004493 ORTHO05D005117 4.8e-26 121.7 141 46.1
HPP92_014371 Vanilla planifolia HOM05D004493 ORTHO05D005117 4.8e-26 121.7 133 48.9
AL1G63570 Arabidopsis lyrata HOM05D004493 ORTHO05D005117 8.3e-26 120.9 131 46.6
BraA08t32112Z Brassica rapa HOM05D004493 ORTHO05D005117 1.1e-25 120.6 130 46.9
FAN25G0645 Fragaria x ananassa HOM05D004493 ORTHO05D005117 1.8e-25 119.8 136 50.0
AUR62020345 Chenopodium quinoa HOM05D004493 ORTHO05D005117 7.0e-25 117.9 130 46.9
Aa31LG10G700 Aethionema arabicum HOM05D004493 ORTHO05D005117 9.1e-25 117.5 131 43.5
CARHR045230 Cardamine hirsuta HOM05D004493 ORTHO05D005117 9.1e-25 117.5 131 45.0
GSVIVG01025508001 Vitis vinifera HOM05D004493 ORTHO05D005117 1.2e-24 117.1 133 51.9
AT1G55540 Arabidopsis thaliana HOM05D004493 ORTHO05D005117 2.7e-24 115.9 131 45.0
CANSAT11G1563 Cannabis sativa HOM05D004493 ORTHO05D005117 3.5e-24 115.5 133 49.6
Sabra03G0166000 Salix brachista HOM05D004493 ORTHO05D005117 3.5e-24 115.5 133 51.1
Duzib168G1306 Durio zibethinus HOM05D004493 ORTHO05D005117 1.3e-23 113.6 133 48.1
Aqoxy1G00107 Aquilegia oxysepala HOM05D004493 ORTHO05D005117 2.2e-23 112.8 147 42.9
Psat6g065800 Pisum sativum HOM05D004493 ORTHO05D005117 2.2e-23 112.8 127 49.6
Ah.06g182270 Amaranthus hybridus HOM05D004493 ORTHO05D005117 1.1e-22 110.5 144 42.4
TPR.G22583 Trifolium pratense HOM05D004493 ORTHO05D005117 2.5e-22 109.4 127 48.0
VMungo0720G2527 Vigna mungo HOM05D004493 ORTHO05D005117 2.1e-21 106.3 129 45.0
Ca_09617_v3 Cicer arietinum L. HOM05D004493 ORTHO05D005117 3.6e-21 105.5 128 46.9
Phvul.007G078700 Phaseolus vulgaris HOM05D004493 ORTHO05D005117 3.6e-21 105.5 129 45.7
BcaC01g01535 Brassica carinata HOM05D004493 ORTHO05D005117 6.1e-21 104.8 130 43.1
C03p92870 Brassica napus HOM05D004493 ORTHO05D005117 6.1e-21 104.8 130 43.1
BolC3t21593H Brassica oleracea HOM05D004493 ORTHO05D005117 8.0e-21 104.4 130 43.1
Medtr1g069005 Medicago truncatula HOM05D004493 ORTHO05D005117 8.0e-21 104.4 127 47.2
Ciclev10014017m.g Citrus clementina HOM05D004493 ORTHO05D005117 1.4e-20 103.6 136 46.3
ATR0068G024 Amborella trichopoda HOM05D004493 ORTHO05D005117 6.8e-20 101.3 124 43.5
Zm00001eb331030 Zea mays HOM05D004493 ORTHO05D005117 1.8e-17 93.2 137 38.0
SEGI_11629 Sequoiadendron giganteum HOM05D004493 ORTHO05D005117 9.2e-17 90.9 125 41.6
Cpa.g.sc119.15 Carica papaya HOM05D004493 ORTHO05D005117 2.7e-16 89.4 114 47.4
Eucgr.J01742 Eucalyptus grandis HOM05D004493 ORTHO05D005117 9.5e-14 80.9 133 39.1
Mapoly0022s0121 Marchantia polymorpha HOM05D004493 ORTHO05D005117 1.8e-09 66.6 114 39.5
QL04p013873 Quercus lobata HOM05D004493 ORTHO05D005117 2.4e-09 66.2 70 48.6
CDE02G0298 Ceratophyllum demersum HOM05D004493 ORTHO05D005117 7.8e-08 61.2 69 44.9
Pp3c13_12950 Physcomitrium patens HOM05D004493 ORTHO05D005117 3.9e-07 58.9 116 32.8
Lj2A889G19 Lonicera japonica HOM05D004493 ORTHO05D005117 2.5e-06 56.2 56 57.1


User provided reference genes

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