Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12612 Avicennia marina HOM05D007819 ORTHO05D009848 3.4e-65 251.5 126 100.0
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 1.6e-43 179.5 97 87.6
SalBow3G4000 Salvia bowleyana HOM05D007819 ORTHO05D009848 1.8e-42 176.0 98 83.7
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 6.8e-42 174.1 97 82.5
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 5.8e-41 171.0 97 79.4
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 7.5e-41 170.6 97 81.4
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 7.5e-41 170.6 97 81.4
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 7.5e-41 170.6 97 80.4
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 7.5e-41 170.6 97 82.5
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 9.8e-41 170.2 97 81.4
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 1.7e-40 169.5 97 80.4
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.2e-40 169.1 97 80.4
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 2.2e-40 169.1 97 80.4
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 2.2e-40 169.1 97 79.4
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 2.2e-40 169.1 97 81.4
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 3.7e-40 168.3 97 80.4
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 3.7e-40 168.3 97 80.4
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 3.7e-40 168.3 97 80.4
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 4.9e-40 167.9 97 79.4
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 1.9e-39 166.0 97 79.4
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 2.4e-39 165.6 97 79.4
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 3.2e-39 165.2 97 78.4
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 9.2e-39 163.7 97 76.3
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 1.6e-38 162.9 97 78.4
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 2.7e-38 162.2 97 76.3
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 4.6e-38 161.4 97 76.3
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 6.0e-38 161.0 87 85.1
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 3.9e-37 158.3 97 73.2
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 3.9e-37 158.3 97 73.2
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 3.9e-37 158.3 97 73.2
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.9e-36 156.0 96 72.9
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 1.9e-36 156.0 97 73.2
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 3.3e-36 155.2 87 81.6
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 3.3e-36 155.2 97 75.3
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 9.5e-36 153.7 97 71.1
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 4.7e-35 151.4 97 69.1
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 4.7e-35 151.4 87 80.5
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 8.1e-35 150.6 91 74.7
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 8.1e-35 150.6 88 76.1
CSS0001112 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 1.1e-34 150.2 98 73.5
CSS0025937 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 1.1e-34 150.2 98 73.5
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.4e-34 149.8 97 71.1
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 1.4e-34 149.8 90 75.6
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.5e-33 146.4 96 69.8
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 3.4e-33 145.2 88 71.6
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 4.4e-33 144.8 91 73.6
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 1.3e-32 143.3 87 73.6
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 6.4e-32 141.0 87 73.6
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 1.1e-31 140.2 88 68.2
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.9e-31 139.4 87 72.4
QL01p036766 Quercus lobata HOM05D007819 ORTHO05D009848 1.9e-31 139.4 87 70.1
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 3.2e-31 138.7 87 67.8
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.5e-28 129.8 97 58.8
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 9.6e-28 127.1 105 59.0
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 9.6e-28 127.1 72 80.6
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.1e-26 123.6 81 66.7
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 4.0e-26 121.7 69 78.3
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 4.0e-26 121.7 71 76.1
Os03g0287100 Oryza sativa ssp. japonica HOM05D007819 ORTHO05D009848 5.2e-26 121.3 97 56.7
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 5.8e-25 117.9 98 54.1
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 7.1e-23 110.9 72 75.0
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 9.3e-23 110.5 97 50.5
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 2.7e-22 109.0 99 53.5
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.5e-22 108.6 99 53.5
FAN11G3664 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.7e-21 106.3 66 77.3
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.7e-21 106.3 99 51.5
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 1.1e-20 103.6 99 51.5
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 4.3e-20 101.7 99 49.5
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 4.3e-20 101.7 99 51.5
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 1.3e-19 100.1 99 50.5
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 8.4e-16 87.4 97 40.2
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 8.4e-16 87.4 97 40.2
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 1.9e-15 86.3 58 67.2
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 7.1e-15 84.3 56 73.2
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 2.1e-14 82.8 97 35.1
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 6.0e-14 81.3 97 36.1
CiPaw.09G094500 Carya illinoinensis HOM05D007819 ORTHO05D009848 4.0e-10 68.6 44 68.2
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 4.5e-09 65.1 41 70.7


User provided reference genes

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