Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12522 Avicennia marina HOM05D006343 ORTHO05D005694 3.8e-143 511.5 269 100.0
SalBow6G3791 Salvia bowleyana HOM05D006343 ORTHO05D005694 1.8e-63 246.9 281 55.5
MSTRG.18339 Avicennia marina HOM05D006343 ORTHO05D005694 1.5e-62 243.8 275 55.6
Oeu055797.1 Olea europaea HOM05D006343 ORTHO05D005694 6.5e-58 228.4 291 51.5
Oeu035725.1 Olea europaea HOM05D003054 ORTHO05D003376 1.0e-50 204.5 278 49.6
Oeu035731.1 Olea europaea HOM05D006343 ORTHO05D005694 6.5e-50 201.8 292 44.5
Oeu035719.1 Olea europaea HOM05D003054 ORTHO05D003376 4.2e-49 199.1 256 47.7
Oeu035722.1 Olea europaea HOM05D006343 ORTHO05D005694 1.3e-45 187.6 284 46.1
Dinv43841 Davidia involucrata HOM05D006343 ORTHO05D005694 3.8e-42 176.0 275 42.9
SGA_v2.0_scaffold1G00635 Striga asiatica HOM05D006343 ORTHO05D005694 7.5e-38 161.8 322 38.5
TAR629G3314 Trochodendron aralioides HOM05D006343 ORTHO05D005694 9.8e-38 161.4 296 41.9
Ciclev10021525m.g Citrus clementina HOM05D006343 ORTHO05D005694 6.3e-37 158.7 298 40.9
Cc02_g38320 Coffea canephora HOM05D006343 ORTHO05D005694 1.0e-34 151.4 294 40.1
Rhsim01G0164400 Rhododendron simsii HOM05D006343 ORTHO05D005694 2.3e-34 150.2 296 39.5
Actinidia20887 Actinidia chinensis HOM05D006343 ORTHO05D005694 2.9e-34 149.8 284 38.7
Oeu035728.1 Olea europaea HOM05D006343 ORTHO05D005694 2.9e-34 149.8 273 45.1
unitig_22.g5289 Utricularia gibba HOM05D006343 ORTHO05D005694 9.5e-33 144.8 280 43.2
Hma1.2p1_0702F.1_g206150 Hydrangea macrophylla HOM05D006343 ORTHO05D005694 2.8e-32 143.3 290 39.7
Nitab4.5_0001655g0110 Nicotiana tabacum HOM05D006343 ORTHO05D005694 2.3e-31 140.2 316 37.0
GSVIVG01026998001 Vitis vinifera HOM05D006343 ORTHO05D005694 1.2e-30 137.9 309 38.2
CiPaw.02G033200 Carya illinoinensis HOM05D006343 ORTHO05D005694 1.5e-30 137.5 312 36.5
Nitab4.5_0001040g0020 Nicotiana tabacum HOM05D006343 ORTHO05D005694 3.4e-30 136.3 314 36.3
Manes.01G254700 Manihot esculenta HOM05D006343 ORTHO05D005694 9.8e-30 134.8 316 35.4
Dinv32502 Davidia involucrata HOM05D006343 ORTHO05D005694 1.3e-29 134.4 215 42.8
Prupe.2G173800 Prunus persica HOM05D006343 ORTHO05D005694 1.3e-29 134.4 305 36.7
Sabra14G0063500 Salix brachista HOM05D006343 ORTHO05D005694 1.3e-29 134.4 310 37.4
Potri.014G087500 Populus trichocarpa HOM05D006343 ORTHO05D005694 3.7e-29 132.9 311 35.4
Nn1g01591 Nelumbo nucifera HOM05D006343 ORTHO05D005694 1.8e-28 130.6 308 33.4
Lsat_1_v5_gn_7_4060 Lactuca sativa HOM05D006343 ORTHO05D005694 3.1e-28 129.8 302 33.1
Phvul.010G101000 Phaseolus vulgaris HOM05D006343 ORTHO05D005694 9.2e-28 128.3 288 38.2
vmacro20913 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 9.2e-28 128.3 314 38.9
Potri.002G161700 Populus trichocarpa HOM05D006343 ORTHO05D005694 1.6e-27 127.5 311 37.0
Manes.05G031900 Manihot esculenta HOM05D006343 ORTHO05D005694 3.5e-27 126.3 311 35.7
Rhsim01G0164000 Rhododendron simsii HOM05D006343 ORTHO05D005694 1.3e-26 124.4 305 38.0
Glyma.07G068200 Glycine max HOM05D006343 ORTHO05D005694 2.9e-26 123.2 305 36.1
Lsat_1_v5_gn_7_4100 Lactuca sativa HOM05D006343 ORTHO05D005694 2.9e-26 123.2 293 33.4
Atru.chr5.528 Acer truncatum HOM05D006343 ORTHO05D005694 8.6e-26 121.7 299 35.8
CSS0004449 Camellia sinensis var. sinensis HOM05D006343 ORTHO05D005694 8.6e-26 121.7 300 34.7
CiPaw.01G064000 Carya illinoinensis HOM05D006343 ORTHO05D005694 8.6e-26 121.7 325 34.2
RcHm_v2.0_Chr1g0357021 Rosa chinensis HOM05D006343 ORTHO05D005694 1.5e-25 120.9 304 32.2
Nitab4.5_0003369g0030 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.9e-25 120.6 298 36.2
CAN.G650.25 Capsicum annuum HOM05D006343 ORTHO05D005694 2.5e-25 120.2 328 33.2
Nitab4.5_0002749g0010 Nicotiana tabacum HOM05D006343 ORTHO05D005694 7.3e-25 118.6 299 35.5
FAN10G0914 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.6e-24 117.5 303 32.0
FAN10G3829 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.6e-24 116.3 303 31.7
Sabra02G0128600 Salix brachista HOM05D006343 ORTHO05D005694 3.6e-24 116.3 310 36.5
VMungo0331G0061 Vigna mungo HOM05D006343 ORTHO05D005694 4.7e-24 115.9 289 37.4
FAN01G0301 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.4e-23 114.4 306 32.0
CANSAT56G2487 Cannabis sativa HOM05D006343 ORTHO05D005694 1.8e-23 114.0 327 31.8
FvH4_7g14980 Fragaria vesca HOM05D006343 ORTHO05D005694 1.8e-23 114.0 314 30.6
FAN06G0921 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.0e-23 112.8 314 30.3
MD01G1067400 Malus domestica HOM05D006343 ORTHO05D005694 1.5e-22 110.9 309 32.7
vmacro20912 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 4.4e-22 109.4 315 32.7
CAN.G650.32 Capsicum annuum HOM05D006343 ORTHO05D005694 2.9e-21 106.7 330 31.5
CDE02G1832 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 1.1e-20 104.8 283 30.0
Glyma.16G034200 Glycine max HOM05D006343 ORTHO05D005694 2.4e-20 103.6 325 33.8
Migut.D00457 Erythranthe guttata HOM05D006343 ORTHO05D005694 4.1e-20 102.8 171 43.3
FAN03G1905 Fragaria x ananassa HOM05D006343 ORTHO05D005694 7.0e-20 102.1 301 31.2
MD07G1133500 Malus domestica HOM05D006343 ORTHO05D005694 7.0e-20 102.1 311 31.8
Rhsim06G0236200 Rhododendron simsii HOM05D006343 ORTHO05D005694 1.6e-19 100.9 292 33.9
CAN.G2424.1 Capsicum annuum HOM05D006343 ORTHO05D005694 2.7e-19 100.1 347 31.4
Lalb_Chr17g0339411 Lupinus albus HOM05D006343 ORTHO05D005694 2.7e-19 100.1 211 34.6
QL04p054168 Quercus lobata HOM05D006343 ORTHO05D005694 2.7e-19 100.1 242 31.8
CAN.G650.35 Capsicum annuum HOM05D006343 ORTHO05D005694 4.6e-19 99.4 317 31.5
COL.COLO4_12739 Corchorus olitorius HOM05D006343 ORTHO05D005694 4.6e-19 99.4 288 35.1
DCAR_015701 Daucus carota HOM05D006343 ORTHO05D005694 5.9e-19 99.0 273 33.3
Duzib138G0695 Durio zibethinus HOM05D006343 ORTHO05D005694 1.0e-18 98.2 294 36.1
Gorai.007G101600 Gossypium raimondii HOM05D006343 ORTHO05D005694 5.0e-18 95.9 283 33.9
Solyc02g070700.3 Solanum lycopersicum HOM05D006343 ORTHO05D005694 1.1e-17 94.7 316 30.1
ECA233G1044 Erigeron canadensis HOM05D006343 ORTHO05D005694 4.3e-17 92.8 272 30.5
TWI23G0998 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 4.3e-17 92.8 290 35.2
Lj3g0021957 Lotus japonicus HOM05D006343 ORTHO05D005694 5.6e-17 92.4 326 30.7
FAN10G3545 Fragaria x ananassa HOM05D006343 ORTHO05D005694 7.3e-17 92.0 339 29.5
CsaV3_6G000720 Cucumis sativus L. HOM05D006343 ORTHO05D005694 9.5e-17 91.7 298 34.6
DCAR_015699 Daucus carota HOM05D006343 ORTHO05D005694 9.5e-17 91.7 277 31.8
Eucgr.I00992 Eucalyptus grandis HOM05D006343 ORTHO05D005694 9.5e-17 91.7 309 32.0
Sopen02g019780 Solanum pennellii HOM05D006343 ORTHO05D005694 9.5e-17 91.7 312 33.3
FAN03G1311 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.6e-16 90.9 312 31.1
Gohir.D11G095300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 6.2e-16 89.0 288 33.0
CAN.G650.28 Capsicum annuum HOM05D006343 ORTHO05D005694 8.0e-16 88.6 238 34.5
FAN10G3557 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.4e-15 87.8 327 29.7
SGA_v2.0_scaffold138G35202 Striga asiatica HOM05D004007 ORTHO05D005127 1.4e-15 87.8 272 32.0
Cpa.g.sc11.35 Carica papaya HOM05D006343 ORTHO05D005694 1.8e-15 87.4 309 33.3
FvH4_7g14870 Fragaria vesca HOM05D006343 ORTHO05D005694 1.8e-15 87.4 306 29.4
Aqoxy7G00256 Aquilegia oxysepala HOM05D006343 ORTHO05D005694 4.0e-15 86.3 326 27.6
PGR042G0313 Punica granatum HOM05D006343 ORTHO05D005694 4.0e-15 86.3 170 35.9
unitig_8.g3737 Utricularia gibba HOM05D006343 ORTHO05D005694 8.9e-15 85.1 296 32.4
FAN06G4353 Fragaria x ananassa HOM05D006343 ORTHO05D005694 5.8e-14 82.4 321 28.0
FAN06G0140 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.7e-13 79.7 318 28.0
CDE06G1281 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 6.4e-13 79.0 154 35.7
Sed0018743 Sechium edule HOM05D006343 ORTHO05D005694 6.4e-13 79.0 301 33.9
Thhalv10028840m.g Eutrema salsugineum HOM05D012121 ORTHO05D005694 8.3e-13 78.6 325 28.9
Potri.014G099800 Populus trichocarpa HOM05D006343 ORTHO05D005694 1.1e-12 78.2 226 28.3
PSO478G0137 Papaver somniferum HOM05D020029 ORTHO05D005694 1.4e-12 77.8 210 34.8
PSO782G1147 Papaver somniferum HOM05D020029 ORTHO05D005694 1.9e-12 77.4 231 30.7
THA.LOC104825850 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 3.2e-12 76.6 309 27.8
BcaB01g02239 Brassica carinata HOM05D012121 ORTHO05D005694 4.1e-12 76.3 317 31.2
PSO478G4526 Papaver somniferum HOM05D020029 ORTHO05D005694 3.5e-11 73.2 206 31.1
Sp6g00380 Schrenkiella parvula HOM05D012121 ORTHO05D005694 6.0e-11 72.4 324 28.4
CARHR248400 Cardamine hirsuta HOM05D012121 ORTHO05D005694 1.0e-10 71.6 315 26.7
AT4G00310 Arabidopsis thaliana HOM05D012121 ORTHO05D005694 1.7e-10 70.9 323 28.2
AL6G53170 Arabidopsis lyrata HOM05D012121 ORTHO05D005694 2.3e-10 70.5 321 28.7
Carub.0006s3693 Capsella rubella HOM05D012121 ORTHO05D005694 3.0e-10 70.1 319 31.7
Actinidia10044 Actinidia chinensis HOM05D006343 ORTHO05D005694 6.6e-10 68.9 112 46.4
Cfa003895 Carpinus fangiana HOM05D006343 ORTHO05D005694 8.6e-10 68.6 285 30.9
Medtr8g028845 Medicago truncatula HOM05D006343 ORTHO05D005694 3.3e-09 66.6 293 34.1
PSO782G0031 Papaver somniferum HOM05D020029 ORTHO05D005694 5.6e-09 65.9 226 28.8
Sc01g0003550 Simmondsia chinensis HOM05D006343 ORTHO05D005694 7.3e-09 65.5 279 28.7
TWI14G1134 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 7.3e-09 65.5 288 31.2
FAN01G2602 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.2e-08 64.7 193 33.7
MELO3C021196.2 Cucumis melo HOM05D006343 ORTHO05D005694 2.1e-08 63.9 294 30.6
PSO782G1271 Papaver somniferum HOM05D020029 ORTHO05D005694 2.1e-08 63.9 190 29.5
FvH4_7g14880 Fragaria vesca HOM05D006343 ORTHO05D005694 3.6e-08 63.2 202 27.7
FAN06G3127 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.8e-07 60.8 202 27.7
FAN10G1634 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.8e-07 60.8 202 27.2
FAN10G3360 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.8e-07 60.8 202 27.2
EL10Ac1g00388 Beta vulgaris HOM05D029301 ORTHO05D005694 8.9e-07 58.5 123 40.7
Thecc.01G356100 Theobroma cacao HOM05D006343 ORTHO05D005694 1.2e-06 58.2 292 29.1
Medtr3g015950 Medicago truncatula HOM05D006343 ORTHO05D005694 3.4e-06 56.6 283 27.6
TPR.G17916 Trifolium pratense HOM05D006343 ORTHO05D005694 3.4e-06 56.6 48 64.6
Gohir.D08G153300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 4.4e-06 56.2 285 29.5
Zm00001eb047010 Zea mays HOM05D024295 ORTHO05D020951 4.4e-06 56.2 217 27.2
ClCG06G003540 Citrullus lanatus HOM05D006343 ORTHO05D005694 9.9e-06 55.1 40 65.0


User provided reference genes

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