Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12501 Avicennia marina HOM05D001638 ORTHO05D005197 6.2e-245 850.5 478 100.0
SGA_v2.0_scaffold5G02962 Striga asiatica HOM05D001638 ORTHO05D005197 3.0e-154 549.3 438 75.3
Migut.N01781 Erythranthe guttata HOM05D001638 ORTHO05D005197 1.7e-146 523.5 440 68.9
SalBow6G5432 Salvia bowleyana HOM05D001638 ORTHO05D005197 1.1e-129 467.6 456 64.0
Cc02_g24880 Coffea canephora HOM05D001638 ORTHO05D005197 5.6e-129 465.3 335 70.7
CSS0022011 Camellia sinensis var. sinensis HOM05D001638 ORTHO05D005197 1.6e-128 463.8 334 69.8
vmacro16776 Vaccinium macrocarpon HOM05D001638 ORTHO05D005197 6.9e-127 458.4 330 69.4
Dinv44076 Davidia involucrata HOM05D001638 ORTHO05D005197 2.0e-126 456.8 337 69.7
Rhsim07G0034600 Rhododendron simsii HOM05D001638 ORTHO05D005197 2.6e-126 456.4 329 69.9
Eucgr.F04452 Eucalyptus grandis HOM05D001638 ORTHO05D005197 1.7e-125 453.8 347 66.6
Actinidia40391 Actinidia chinensis HOM05D001638 ORTHO05D005197 2.9e-125 453.0 332 69.3
Dinv43635 Davidia involucrata HOM05D001638 ORTHO05D005197 1.4e-124 450.7 335 69.9
Gohir.A13G033800 Gossypium hirsutum HOM05D001638 ORTHO05D005197 5.4e-124 448.7 324 69.4
unitig_37.g13004 Utricularia gibba HOM05D000186 ORTHO05D001124 4.6e-123 445.7 355 67.0
Thecc.02G084000 Theobroma cacao HOM05D001638 ORTHO05D005197 1.5e-121 440.7 326 69.3
Potri.019G085100 Populus trichocarpa HOM05D001638 ORTHO05D005197 1.9e-121 440.3 325 69.2
Duzib132G0757 Durio zibethinus HOM05D001638 ORTHO05D005197 9.6e-121 438.0 330 69.4
Gorai.013G036600 Gossypium raimondii HOM05D001638 ORTHO05D005197 2.1e-120 436.8 319 69.0
TAR629G0136 Trochodendron aralioides HOM05D001638 ORTHO05D005197 2.1e-120 436.8 348 65.5
HanXRQChr01g0007441 Helianthus annuus HOM05D001638 ORTHO05D005197 1.8e-119 433.7 327 67.6
Gohir.D13G032100 Gossypium hirsutum HOM05D001638 ORTHO05D005197 6.9e-119 431.8 316 68.7
CiPaw.14G021800 Carya illinoinensis HOM05D001638 ORTHO05D005197 9.0e-119 431.4 334 66.8
GSVIVG01018246001 Vitis vinifera HOM05D001638 ORTHO05D005197 1.5e-118 430.6 345 66.1
HanXRQChr14g0428901 Helianthus annuus HOM05D001638 ORTHO05D005197 2.0e-118 430.3 331 67.4
DCAR_023354 Daucus carota HOM05D001638 ORTHO05D005197 7.6e-118 428.3 348 64.9
AUR62023428 Chenopodium quinoa HOM05D001638 ORTHO05D005197 2.2e-117 426.8 335 67.5
Ciclev10015475m.g Citrus clementina HOM05D001638 ORTHO05D005197 2.2e-117 426.8 329 67.5
Lsat_1_v5_gn_4_15080 Lactuca sativa HOM05D001638 ORTHO05D005197 2.2e-117 426.8 337 66.5
Sc02g0002980 Simmondsia chinensis HOM05D001638 ORTHO05D005197 2.2e-117 426.8 334 65.0
Manes.01G272000 Manihot esculenta HOM05D001638 ORTHO05D005197 2.9e-117 426.4 337 65.6
arahy.Tifrunner.gnm1.ann1.9JI82G Arachis hypogaea HOM05D001638 ORTHO05D005197 1.4e-116 424.1 331 66.5
COL.COLO4_25944 Corchorus olitorius HOM05D001638 ORTHO05D005197 1.9e-116 423.7 320 67.5
Phvul.008G045000 Phaseolus vulgaris HOM05D001638 ORTHO05D005197 1.9e-116 423.7 333 66.7
arahy.Tifrunner.gnm1.ann1.MQ0E05 Arachis hypogaea HOM05D001638 ORTHO05D005197 3.2e-116 422.9 331 66.2
VMungo1383G3402 Vigna mungo HOM05D001638 ORTHO05D005197 3.2e-116 422.9 334 66.2
Glyma.09G089400 Glycine max HOM05D001638 ORTHO05D005197 5.5e-116 422.2 330 66.4
Glyma.18G253900 Glycine max HOM05D001638 ORTHO05D005197 1.2e-115 421.0 331 66.5
Sabra19G0096200 Salix brachista HOM05D001638 ORTHO05D005197 2.1e-115 420.2 375 61.1
Medtr7g007890 Medicago truncatula HOM05D001638 ORTHO05D005197 2.7e-115 419.9 335 66.0
Nn6g33853 Nelumbo nucifera HOM05D001638 ORTHO05D005197 2.7e-115 419.9 332 65.4
MBI04_g36329_MAGBIO Magnolia biondii HOM05D001638 ORTHO05D005197 4.6e-115 419.1 355 62.3
MD02G1217000 Malus domestica HOM05D001638 ORTHO05D005197 6.0e-115 418.7 335 66.0
LjContig00564g0006049 Lotus japonicus HOM05D001638 ORTHO05D005197 7.9e-115 418.3 331 65.9
Medtr5g064850 Medicago truncatula HOM05D001638 ORTHO05D005197 1.0e-114 417.9 335 65.4
TWI23G0567 Tripterygium wilfordii HOM05D001638 ORTHO05D005197 3.0e-114 416.4 335 64.8
Prupe.2G127200 Prunus persica HOM05D001638 ORTHO05D005197 1.1e-113 414.5 341 65.1
TAR636G3630 Trochodendron aralioides HOM05D001638 ORTHO05D005197 1.5e-113 414.1 328 67.4
PGR031G2794 Punica granatum HOM05D001638 ORTHO05D005197 1.9e-113 413.7 328 64.6
Psat0s3614g0040 Pisum sativum HOM05D001638 ORTHO05D005197 3.3e-113 412.9 333 65.8
Cfa011091 Carpinus fangiana HOM05D001638 ORTHO05D005197 4.3e-113 412.5 332 65.1
Sp2g24540 Schrenkiella parvula HOM05D001638 ORTHO05D005197 5.6e-113 412.1 330 66.4
AT5G61330 Arabidopsis thaliana HOM05D001638 ORTHO05D005197 9.6e-113 411.4 339 65.2
Thhalv10004255m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 1.3e-112 411.0 330 65.2
Ca_04112_v3 Cicer arietinum L. HOM05D001638 ORTHO05D005197 1.6e-112 410.6 333 64.3
BolC7t45021H Brassica oleracea HOM05D001638 ORTHO05D005197 2.8e-112 409.8 323 66.9
BcaC04g23457 Brassica carinata HOM05D001638 ORTHO05D005197 6.2e-112 408.7 323 66.3
CANSAT56G0649 Cannabis sativa HOM05D001638 ORTHO05D005197 6.2e-112 408.7 324 64.2
C07p44980 Brassica napus HOM05D001638 ORTHO05D005197 1.4e-111 407.5 327 66.4
QL04p031108 Quercus lobata HOM05D001638 ORTHO05D005197 4.0e-111 406.0 329 65.0
BraA03t13813Z Brassica rapa HOM05D001638 ORTHO05D005197 5.3e-111 405.6 330 66.4
EL10Ac1g00784 Beta vulgaris HOM05D001638 ORTHO05D005197 6.9e-111 405.2 338 63.0
C09p08140 Brassica napus HOM05D001638 ORTHO05D005197 6.9e-111 405.2 323 65.9
BolC9t53726H Brassica oleracea HOM05D001638 ORTHO05D005197 6.9e-111 405.2 323 65.9
Lj9C558G6 Lonicera japonica HOM05D001638 ORTHO05D001875 6.9e-111 405.2 348 61.5
A03p46940 Brassica napus HOM05D001638 ORTHO05D005197 1.2e-110 404.4 326 66.6
AL8G37990 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 3.4e-110 402.9 331 64.4
A09p07280 Brassica napus HOM05D001638 ORTHO05D005197 3.4e-110 402.9 327 65.7
Ah.03g133920 Amaranthus hybridus HOM05D001638 ORTHO05D005197 5.8e-110 402.1 335 63.3
PGSC0003DMG400026041 Solanum tuberosum HOM05D001638 ORTHO05D005197 2.2e-109 400.2 320 66.9
Solyc01g090470.3 Solanum lycopersicum HOM05D001638 ORTHO05D005197 3.8e-109 399.4 317 66.9
Sopen01g036260 Solanum pennellii HOM05D001638 ORTHO05D005197 3.8e-109 399.4 317 67.2
CARHR275090 Cardamine hirsuta HOM05D001638 ORTHO05D005197 6.5e-109 398.7 330 65.2
CsaV3_3G007540 Cucumis sativus L. HOM05D001638 ORTHO05D005197 4.2e-108 396.0 324 63.6
Peaxi162Scf00392g00227 Petunia axillaris HOM05D001638 ORTHO05D005197 4.2e-108 396.0 288 69.8
Carub.0008s2200 Capsella rubella HOM05D001638 ORTHO05D005197 7.1e-108 395.2 334 63.8
MELO3C005976.2 Cucumis melo HOM05D001638 ORTHO05D005197 7.1e-108 395.2 329 63.2
RcHm_v2.0_Chr1g0346971 Rosa chinensis HOM05D001638 ORTHO05D005197 7.1e-108 395.2 337 62.3
THA.LOC104818326 Tarenaya hassleriana HOM05D001638 ORTHO05D005197 7.1e-108 395.2 325 65.2
Hund17077 Selenicereus undatus HOM05D001638 ORTHO05D005197 2.7e-107 393.3 355 60.3
BcaB04g19906 Brassica carinata HOM05D001638 ORTHO05D005197 4.6e-107 392.5 334 64.1
BraA09t36377Z Brassica rapa HOM05D001638 ORTHO05D005197 7.9e-107 391.7 317 64.4
Lalb_Chr19g0127051 Lupinus albus HOM05D001638 ORTHO05D005197 7.9e-107 391.7 315 64.4
BcaC06g33229 Brassica carinata HOM05D001638 ORTHO05D005197 1.8e-106 390.6 334 64.1
FvH4_7g09810 Fragaria vesca HOM05D001638 ORTHO05D005197 1.1e-105 387.9 337 61.4
FAN10G1788 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.1e-105 387.9 337 61.1
FAN10G2339 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.1e-105 387.9 337 61.1
Lsat_1_v5_gn_4_70960 Lactuca sativa HOM05D001638 ORTHO05D005197 1.5e-105 387.5 341 60.4
CAN.G362.16 Capsicum annuum HOM05D001638 ORTHO05D005197 7.4e-105 385.2 286 69.6
FAN01G1872 Fragaria x ananassa HOM05D001638 ORTHO05D005197 4.8e-104 382.5 331 61.0
DCAR_029773 Daucus carota HOM05D001638 ORTHO05D005197 1.1e-103 381.3 367 57.5
ClCG05G000380 Citrullus lanatus HOM05D001638 ORTHO05D005197 1.4e-103 380.9 332 61.4
Sed0004454 Sechium edule HOM05D001638 ORTHO05D005197 3.1e-103 379.8 336 60.1
PSO541G3735 Papaver somniferum HOM05D001638 ORTHO05D005197 1.3e-101 374.4 312 61.2
ECA234G3220 Erigeron canadensis HOM05D001638 ORTHO05D005197 2.2e-101 373.6 300 66.0
CDE03G0227 Ceratophyllum demersum HOM05D001638 ORTHO05D005197 3.8e-101 372.9 338 61.8
TPR.G11809 Trifolium pratense HOM05D001638 ORTHO05D005197 3.8e-101 372.9 363 58.1
Aa31LG11G2080 Aethionema arabicum HOM05D001638 ORTHO05D005197 1.1e-100 371.3 309 63.8
Aqoxy7G00848 Aquilegia oxysepala HOM05D001638 ORTHO05D005197 2.5e-100 370.2 343 57.7
PSO170G6800 Papaver somniferum HOM05D001638 ORTHO05D005197 3.2e-100 369.8 301 62.5
PSO017G3357 Papaver somniferum HOM05D001638 ORTHO05D005197 6.1e-99 365.5 293 63.1
Os01g0526200 Oryza sativa ssp. japonica HOM05D001638 ORTHO05D005197 3.0e-98 363.2 331 56.5
SGA_v2.0_scaffold131G34466 Striga asiatica HOM05D001638 ORTHO05D005197 1.4e-92 344.4 226 77.0
FAN06G3795 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.8e-90 337.4 444 45.9
HPP92_024242 Vanilla planifolia HOM05D001638 ORTHO05D005197 2.3e-90 337.0 326 57.1
QL01p011221 Quercus lobata HOM05D001638 ORTHO05D005197 3.0e-90 336.7 368 54.3
ATR0057G068 Amborella trichopoda HOM05D001638 ORTHO05D005197 5.1e-90 335.9 308 59.1
Zm00001eb333990 Zea mays HOM05D001638 ORTHO05D005197 1.5e-89 334.3 299 58.9
Zm00001eb127190 Zea mays HOM05D001638 ORTHO05D005197 5.3e-87 325.9 299 57.9
Thhalv10020921m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 1.2e-86 324.7 305 59.0
SEGI_12976 Sequoiadendron giganteum HOM05D001638 ORTHO05D005197 4.7e-83 312.8 361 47.9
AL1G10102 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 6.7e-82 308.9 314 57.0
Nitab4.5_0000914g0150 Nicotiana tabacum HOM05D001638 ORTHO05D005197 2.0e-78 297.4 288 58.7
Nitab4.5_0010229g0010 Nicotiana tabacum HOM05D001638 ORTHO05D005197 4.0e-74 283.1 225 66.2
Mapoly0029s0122 Marchantia polymorpha HOM05D001638 ORTHO05D005197 9.1e-63 245.4 338 40.8
Pp3c5_7370 Physcomitrium patens HOM05D001638 ORTHO05D005197 8.5e-61 238.8 328 41.2
MD07G1102000 Malus domestica HOM05D001638 ORTHO05D005197 9.8e-57 225.3 216 56.5
SHI03505 Sapria himalayana HOM05D001638 ORTHO05D005197 3.3e-52 210.3 312 45.2
AUR62013726 Chenopodium quinoa HOM05D001638 ORTHO05D005197 2.8e-51 207.2 139 79.1
Atru.chr5.164 Acer truncatum HOM05D001638 ORTHO05D005197 1.2e-41 175.3 158 58.9
Actinidia12156 Actinidia chinensis HOM05D001638 ORTHO05D005197 2.0e-41 174.5 111 76.6
Cre13.g587000 Chlamydomonas reinhardtii HOM05D001638 ORTHO05D005197 9.2e-39 165.6 381 32.3
AL4G38750 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 2.7e-38 164.1 159 57.2
Atru.chr5.165 Acer truncatum HOM05D001638 ORTHO05D005197 4.6e-38 163.3 112 76.8
FAN06G4892 Fragaria x ananassa HOM05D001638 ORTHO05D005197 6.6e-37 159.5 156 53.2
FAN03G2111 Fragaria x ananassa HOM05D001638 ORTHO05D001690 4.3e-36 156.8 155 53.5
SMO141G0070 Selaginella moellendorffii HOM05D001638 ORTHO05D005197 5.6e-36 156.4 260 36.5
arahy.Tifrunner.gnm1.ann1.XG8PKW Arachis hypogaea HOM05D001638 ORTHO05D005197 2.8e-35 154.1 176 51.7
MCO04G285 Micromonas commoda HOM05D001638 ORTHO05D005197 1.8e-34 151.4 361 30.2
Haze_17173 Corylus avellana HOM05D001638 ORTHO05D005197 4.0e-34 150.2 212 45.8
MD02G1263900 Malus domestica HOM05D001638 ORTHO05D005197 8.9e-26 122.5 97 63.9
MD07G1101900 Malus domestica HOM05D001638 ORTHO05D005197 3.8e-24 117.1 169 43.2
Actinidia12157 Actinidia chinensis HOM05D001638 ORTHO05D005197 2.4e-23 114.4 70 80.0
Cpa.g.sc116.74 Carica papaya HOM05D001638 ORTHO05D005197 5.4e-23 113.2 87 66.7
CBR_g1066 Chara braunii HOM05D001638 ORTHO05D005197 1.2e-19 102.1 173 38.7
PRCOL_00005874 Prasinoderma coloniale HOM05D001638 ORTHO05D005197 6.2e-19 99.8 335 27.8
arahy.Tifrunner.gnm1.ann1.XV6DNZ Arachis hypogaea HOM05D001638 ORTHO05D005197 1.4e-18 98.6 61 77.0
FAN06G4261 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.4e-18 98.6 177 43.5
Oeu051899.1 Olea europaea HOM05D001638 ORTHO05D005197 1.4e-18 98.6 65 75.4
AagrBONN_evm.TU.Sc2ySwM_368.1521 Anthoceros agrestis HOM05D001638 ORTHO05D005197 1.2e-17 95.5 84 58.3
Cpa.g.c42599 Carica papaya HOM05D001638 ORTHO05D005197 1.2e-17 95.5 76 63.2
Actinidia12155 Actinidia chinensis HOM05D001638 ORTHO05D005197 1.5e-17 95.1 77 61.0
Oeu021607.1 Olea europaea HOM05D001638 ORTHO05D005197 1.7e-16 91.7 62 71.0
MD02G1264000 Malus domestica HOM05D001638 ORTHO05D005197 2.2e-16 91.3 68 67.6
MD07G1102300 Malus domestica HOM05D001638 ORTHO05D005197 3.8e-16 90.5 113 50.4
arahy.Tifrunner.gnm1.ann1.HIFV4E Arachis hypogaea HOM05D001638 ORTHO05D005197 4.9e-16 90.1 177 35.0
MD02G1264200 Malus domestica HOM05D001638 ORTHO05D005197 1.1e-15 89.0 66 71.2
FvH4_7g09370 Fragaria vesca HOM05D001638 ORTHO05D005197 9.3e-15 85.9 135 44.4
arahy.Tifrunner.gnm1.ann1.11FR17 Arachis hypogaea HOM05D001638 ORTHO05D005197 1.2e-14 85.5 60 68.3
Sed0021805 Sechium edule HOM05D001638 ORTHO05D005197 9.6e-12 75.9 110 47.3
FAN06G2650 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.6e-11 75.1 89 53.9
Cfa024988 Carpinus fangiana HOM05D001638 ORTHO05D124161 1.2e-09 68.9 330 24.8
CBR_g1068 Chara braunii HOM05D001638 ORTHO05D005197 5.4e-07 60.1 135 26.7
MD07G1073400 Malus domestica HOM05D001638 ORTHO05D005197 6.0e-06 56.6 60 55.0
arahy.Tifrunner.gnm1.ann1.R2G04T Arachis hypogaea HOM05D001638 ORTHO05D005197 7.9e-06 56.2 33 81.8


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