Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 3.4e-239 831.2 413 100.0
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 8.7e-187 657.1 396 80.3
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 1.5e-186 656.4 390 82.3
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 2.5e-186 655.6 399 80.7
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 1.4e-184 649.8 420 76.4
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 9.0e-184 647.1 402 76.9
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 3.8e-182 641.7 401 78.1
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 2.5e-181 639.0 408 76.0
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 1.0e-179 633.6 399 75.4
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 1.1e-178 630.2 401 75.8
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 1.9e-178 629.4 407 75.7
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 9.6e-178 627.1 394 77.7
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 1.3e-177 626.7 393 77.1
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 2.8e-177 625.5 393 77.9
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 4.8e-177 624.8 393 78.1
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 1.1e-176 623.6 393 77.9
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 3.1e-176 622.1 400 76.5
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 5.3e-176 621.3 403 74.9
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 9.0e-176 620.5 404 75.7
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 7.6e-175 617.5 405 75.6
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 5.0e-174 614.8 404 76.0
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 2.1e-172 609.4 411 73.2
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 2.3e-171 605.9 394 75.9
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 3.3e-170 602.1 399 75.2
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 4.3e-170 601.7 403 73.4
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 5.7e-170 601.3 401 73.1
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 3.4e-167 592.0 396 73.7
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 1.3e-166 590.1 402 73.1
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 3.8e-166 588.6 403 71.5
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 8.5e-166 587.4 403 73.0
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 1.1e-165 587.0 397 71.8
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 1.9e-165 586.3 396 72.5
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 2.5e-165 585.9 403 72.5
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 9.4e-165 583.9 396 72.7
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 1.2e-164 583.6 403 71.0
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.4e-163 580.1 403 72.2
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.4e-163 580.1 402 72.4
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 2.3e-163 579.3 363 76.3
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 3.0e-163 578.9 392 71.4
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 3.0e-163 578.9 405 70.4
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 5.1e-163 578.2 391 72.9
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 2.0e-162 576.2 375 74.4
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 7.4e-162 574.3 395 69.6
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 7.4e-162 574.3 401 71.1
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 2.2e-161 572.8 398 71.4
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 2.8e-161 572.4 370 75.1
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 4.8e-161 571.6 402 71.1
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 8.2e-161 570.9 369 74.3
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 1.1e-160 570.5 393 72.3
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.1e-160 570.5 403 70.5
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 1.8e-160 569.7 399 70.9
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 1.8e-160 569.7 362 76.2
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 2.4e-160 569.3 402 69.2
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 5.3e-160 568.2 404 71.0
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 6.9e-160 567.8 403 70.7
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 6.9e-160 567.8 394 71.8
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 9.1e-160 567.4 393 72.0
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 1.5e-159 566.6 399 70.2
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 2.6e-159 565.8 404 70.0
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 4.5e-159 565.1 369 72.6
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 7.7e-159 564.3 402 70.6
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 1.0e-158 563.9 403 69.2
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 1.0e-158 563.9 396 71.7
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.3e-158 563.5 389 75.6
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 1.7e-158 563.1 394 70.6
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 1.7e-158 563.1 403 70.2
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 2.2e-158 562.8 396 71.5
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 6.5e-158 561.2 402 68.7
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 8.5e-158 560.8 338 79.3
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 1.1e-157 560.5 338 79.3
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.1e-157 560.5 338 79.3
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 1.4e-157 560.1 363 72.5
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 1.4e-157 560.1 354 74.6
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 1.4e-157 560.1 354 74.6
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.9e-157 559.7 338 79.3
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 5.5e-157 558.1 399 69.2
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 5.5e-157 558.1 368 72.3
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 9.4e-157 557.4 374 71.7
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 9.4e-157 557.4 374 71.7
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 1.2e-156 557.0 345 77.1
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 1.6e-156 556.6 354 73.4
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 1.6e-156 556.6 368 72.0
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 2.7e-156 555.8 363 72.2
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 2.7e-156 555.8 352 75.9
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 4.7e-156 555.1 336 78.9
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 6.1e-156 554.7 339 76.1
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 6.1e-156 554.7 400 70.5
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 1.0e-155 553.9 450 63.6
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 1.8e-155 553.1 338 76.3
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 2.3e-155 552.7 375 71.5
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 2.3e-155 552.7 325 80.9
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 1.1e-154 550.4 396 68.2
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.5e-154 550.1 431 67.1
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 2.2e-150 536.2 420 64.0
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 3.2e-149 532.3 403 67.2
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 4.7e-148 528.5 332 72.6
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 5.7e-146 521.5 372 69.4
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 7.5e-146 521.2 402 66.9
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 1.4e-144 516.9 397 68.5
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 1.6e-143 513.5 299 80.9
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 3.5e-143 512.3 401 65.6
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 2.0e-138 496.5 365 67.4
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 2.6e-138 496.1 349 70.2
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 4.0e-131 472.2 313 74.4
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 1.3e-126 457.2 400 58.8
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.0e-123 447.6 323 65.0
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 2.3e-123 446.4 366 61.2
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 1.4e-120 437.2 352 61.9
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 9.5e-109 397.9 330 61.2
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 2.3e-107 393.3 290 66.6
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 3.4e-106 389.4 282 69.5
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 1.4e-88 330.9 288 59.0
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 1.7e-86 323.9 291 55.7
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 1.8e-83 313.9 298 57.7
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 6.9e-83 312.0 315 49.5
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 7.6e-74 282.0 190 70.5
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 6.9e-67 258.8 181 73.5
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.2e-55 221.5 174 63.8
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 7.2e-48 195.7 130 67.7
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 9.1e-43 178.7 127 72.4
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 1.4e-40 171.4 114 73.7
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 6.5e-33 146.0 102 68.6
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 5.9e-26 122.9 115 53.9
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 2.6e-21 107.5 162 38.9
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 4.8e-20 103.2 64 75.0
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 9.1e-19 99.0 106 50.0
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 3.2e-16 90.5 52 80.8


User provided reference genes

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