Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12316 Avicennia marina HOM05D007014 ORTHO05D008894 5.0e-96 354.4 171 100.0
Oeu029922.1 Olea europaea HOM05D007014 ORTHO05D008894 8.3e-67 257.3 158 75.9
SalBow1G7232 Salvia bowleyana HOM05D007014 ORTHO05D008894 1.9e-66 256.1 158 79.1
Dinv02170 Davidia involucrata HOM05D007014 ORTHO05D008894 1.2e-62 243.4 158 74.1
Potri.013G134102 Populus trichocarpa HOM05D007014 ORTHO05D008894 1.6e-62 243.0 158 75.3
Potri.013G134000 Populus trichocarpa HOM05D007014 ORTHO05D008894 2.8e-62 242.3 158 75.3
SGA_v2.0_scaffold307G48064 Striga asiatica HOM05D007014 ORTHO05D008894 6.2e-62 241.1 155 74.8
CAN.G486.11 Capsicum annuum HOM05D007014 ORTHO05D008894 1.8e-61 239.6 158 72.2
Nitab4.5_0003022g0100 Nicotiana tabacum HOM05D007014 ORTHO05D008894 5.2e-61 238.0 158 72.2
QL08p038417 Quercus lobata HOM05D007014 ORTHO05D008894 6.8e-61 237.7 156 71.8
PGSC0003DMG400007868 Solanum tuberosum HOM05D007014 ORTHO05D008894 6.8e-61 237.7 154 73.4
Nn1g06593 Nelumbo nucifera HOM05D007014 ORTHO05D008894 8.9e-61 237.3 157 70.7
Sabra13G0113800 Salix brachista HOM05D007014 ORTHO05D008894 1.2e-60 236.9 153 74.5
Hma1.2p1_1201F.1_g266700 Hydrangea macrophylla HOM05D007014 ORTHO05D008894 4.4e-60 235.0 160 72.5
PGSC0003DMG400007866 Solanum tuberosum HOM05D007014 ORTHO05D008894 1.3e-59 233.4 154 71.4
GSVIVG01030373001 Vitis vinifera HOM05D007014 ORTHO05D008894 1.7e-59 233.0 159 72.3
Migut.H01076 Erythranthe guttata HOM05D007014 ORTHO05D008894 3.7e-59 231.9 157 72.0
Peaxi162Scf02133g00022 Petunia axillaris HOM05D007014 ORTHO05D008894 3.7e-59 231.9 155 70.3
Solyc12g010680.3 Solanum lycopersicum HOM05D007014 ORTHO05D008894 3.7e-59 231.9 154 73.4
Sopen12g005310 Solanum pennellii HOM05D007014 ORTHO05D008894 4.9e-59 231.5 154 73.4
Cfa014594 Carpinus fangiana HOM05D007014 ORTHO05D008894 1.4e-58 229.9 158 69.0
Haze_13147 Corylus avellana HOM05D007014 ORTHO05D008894 1.4e-58 229.9 158 69.0
Rhsim04G0068000 Rhododendron simsii HOM05D007014 ORTHO05D008894 1.4e-58 229.9 155 71.0
Cc05_g06870 Coffea canephora HOM05D007014 ORTHO05D008894 1.9e-58 229.6 159 69.8
unitig_21.g20401 Utricularia gibba HOM05D007014 ORTHO05D008894 3.2e-58 228.8 157 67.5
TAR629G1268 Trochodendron aralioides HOM05D007014 ORTHO05D008894 5.4e-58 228.0 158 71.5
CSS0024097 Camellia sinensis var. sinensis HOM05D007014 ORTHO05D008894 7.1e-58 227.6 157 71.3
ClCG02G017580 Citrullus lanatus HOM05D007014 ORTHO05D008894 9.2e-58 227.3 153 70.6
Lj8A113T47 Lonicera japonica HOM05D007014 ORTHO05D008894 9.2e-58 227.3 151 70.9
Manes.12G090900 Manihot esculenta HOM05D007014 ORTHO05D008894 1.2e-57 226.9 153 69.3
RcHm_v2.0_Chr6g0277731 Rosa chinensis HOM05D007014 ORTHO05D008894 2.1e-57 226.1 158 68.4
vmacro09278 Vaccinium macrocarpon HOM05D007014 ORTHO05D008894 2.1e-57 226.1 155 69.7
Psat7g157760 Pisum sativum HOM05D007014 ORTHO05D008894 6.0e-57 224.6 158 70.3
FvH4_2g15130 Fragaria vesca HOM05D007014 ORTHO05D008894 1.0e-56 223.8 159 69.2
Ca_28202_v3 Cicer arietinum L. HOM05D007014 ORTHO05D008894 3.9e-56 221.9 156 70.5
Medtr4g046047 Medicago truncatula HOM05D007014 ORTHO05D008894 5.1e-56 221.5 158 69.6
MELO3C024591.2 Cucumis melo HOM05D007014 ORTHO05D008894 6.6e-56 221.1 153 69.9
Thecc.02G177900 Theobroma cacao HOM05D007014 ORTHO05D008894 8.6e-56 220.7 158 69.6
HanXRQChr17g0553541 Helianthus annuus HOM05D007014 ORTHO05D008894 3.3e-55 218.8 156 65.4
Prupe.3G155400 Prunus persica HOM05D007014 ORTHO05D008894 3.3e-55 218.8 155 67.7
MBI17_g43194_MAGBIO Magnolia biondii HOM05D007014 ORTHO05D008894 4.3e-55 218.4 137 76.6
Nitab4.5_0002575g0020 Nicotiana tabacum HOM05D007014 ORTHO05D008894 4.3e-55 218.4 175 62.9
FAN15G2141 Fragaria x ananassa HOM05D007014 ORTHO05D008894 9.5e-55 217.2 152 69.1
FAN27G2134 Fragaria x ananassa HOM05D007014 ORTHO05D008894 9.5e-55 217.2 159 66.7
CANSAT78G1474 Cannabis sativa HOM05D007014 ORTHO05D008894 1.2e-54 216.9 153 68.0
Duzib052G1001 Durio zibethinus HOM05D007014 ORTHO05D008894 1.6e-54 216.5 155 70.3
MD09G1249800 Malus domestica HOM05D007014 ORTHO05D008894 1.6e-54 216.5 161 65.8
Sc21g0002660 Simmondsia chinensis HOM05D007014 ORTHO05D008894 1.6e-54 216.5 158 68.4
Aqoxy4G01010 Aquilegia oxysepala HOM05D007014 ORTHO05D008894 3.6e-54 215.3 150 66.7
PSO832G4125 Papaver somniferum HOM05D007014 ORTHO05D008894 3.6e-54 215.3 153 68.6
COL.COLO4_07554 Corchorus olitorius HOM05D007014 ORTHO05D008894 4.7e-54 214.9 158 66.5
Gohir.D13G066000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 4.7e-54 214.9 154 68.8
Gorai.013G075300 Gossypium raimondii HOM05D007014 ORTHO05D008894 4.7e-54 214.9 154 68.8
Thhalv10008981m.g Eutrema salsugineum HOM05D007014 ORTHO05D008894 6.2e-54 214.5 148 67.6
Aa31LG1G20970 Aethionema arabicum HOM05D007014 ORTHO05D008894 8.1e-54 214.2 150 66.7
AT1G03650 Arabidopsis thaliana HOM05D007014 ORTHO05D008894 8.1e-54 214.2 150 66.0
Carub.0001s0276 Capsella rubella HOM05D007014 ORTHO05D008894 8.1e-54 214.2 150 66.0
CARHR002980 Cardamine hirsuta HOM05D007014 ORTHO05D008894 1.4e-53 213.4 155 65.2
Sp1g02550 Schrenkiella parvula HOM05D007014 ORTHO05D008894 1.4e-53 213.4 150 65.3
Cpa.g.sc34.144 Carica papaya HOM05D007014 ORTHO05D008894 3.1e-53 212.2 172 60.5
Sed0017748 Sechium edule HOM05D007014 ORTHO05D008894 3.1e-53 212.2 153 68.6
TPR.G21768 Trifolium pratense HOM05D007014 ORTHO05D008894 3.1e-53 212.2 158 68.4
Ciclev10022606m.g Citrus clementina HOM05D007014 ORTHO05D008894 4.0e-53 211.8 151 66.2
BcaC07g42236 Brassica carinata HOM05D007014 ORTHO05D008894 5.2e-53 211.5 149 66.4
BcaC07g42241 Brassica carinata HOM05D007014 ORTHO05D008894 6.8e-53 211.1 150 65.3
Gohir.A13G056000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 6.8e-53 211.1 154 67.5
PSO210G2618 Papaver somniferum HOM05D007014 ORTHO05D008894 6.8e-53 211.1 153 68.0
Phvul.011G117200 Phaseolus vulgaris HOM05D007014 ORTHO05D008894 6.8e-53 211.1 158 67.7
AL1G13150 Arabidopsis lyrata HOM05D007014 ORTHO05D008894 1.2e-52 210.3 150 65.3
TWI36G0686 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 3.4e-52 208.8 155 65.2
Lj3g0024821 Lotus japonicus HOM05D007014 ORTHO05D008894 5.8e-52 208.0 158 65.2
Ciclev10022631m.g Citrus clementina HOM05D007014 ORTHO05D008894 7.6e-52 207.6 151 64.9
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 7.6e-52 207.6 165 62.4
EL10Ac9g20747 Beta vulgaris HOM05D007014 ORTHO05D008894 1.3e-51 206.8 151 64.2
CDE02G4296 Ceratophyllum demersum HOM05D007014 ORTHO05D008894 1.7e-51 206.5 150 67.3
Glyma.12G111800 Glycine max HOM05D007014 ORTHO05D008894 1.7e-51 206.5 158 64.6
BcaC07g42250 Brassica carinata HOM05D007014 ORTHO05D008894 3.2e-50 202.2 154 61.7
C08p52830 Brassica napus HOM05D007014 ORTHO05D008894 3.2e-50 202.2 154 61.7
THA.LOC104801176 Tarenaya hassleriana HOM05D007014 ORTHO05D008894 3.2e-50 202.2 153 62.7
BolC8t52799H Brassica oleracea HOM05D007014 ORTHO05D008894 5.4e-50 201.4 150 64.0
BraA09t42163Z Brassica rapa HOM05D007014 ORTHO05D008894 7.1e-50 201.1 150 63.3
arahy.Tifrunner.gnm1.ann1.UXPW02 Arachis hypogaea HOM05D007014 ORTHO05D008894 9.2e-50 200.7 153 62.7
arahy.Tifrunner.gnm1.ann1.YPG8JQ Arachis hypogaea HOM05D007014 ORTHO05D008894 1.2e-49 200.3 153 62.7
arahy.Tifrunner.gnm1.ann1.1ZYA2W Arachis hypogaea HOM05D007014 ORTHO05D008894 2.7e-49 199.1 153 62.7
CiPaw.03G175500 Carya illinoinensis HOM05D007014 ORTHO05D008894 6.0e-49 198.0 133 67.7
Glyma.06G293600 Glycine max HOM05D007014 ORTHO05D008894 6.0e-49 198.0 158 62.0
BcaC07g42259 Brassica carinata HOM05D007014 ORTHO05D008894 1.3e-48 196.8 154 61.7
FAN24G2354 Fragaria x ananassa HOM05D007014 ORTHO05D008894 1.3e-48 196.8 158 63.3
Lsat_1_v5_gn_8_133041 Lactuca sativa HOM05D007014 ORTHO05D008894 2.3e-48 196.1 153 59.5
HPP92_002954 Vanilla planifolia HOM05D007014 ORTHO05D008894 2.1e-46 189.5 144 64.6
VMungo1127G0420 Vigna mungo HOM05D007014 ORTHO05D008894 4.7e-46 188.3 182 56.0
ECA233G3399 Erigeron canadensis HOM05D007880 ORTHO05D003386 2.6e-44 182.6 136 63.2
arahy.Tifrunner.gnm1.ann1.THUB96 Arachis hypogaea HOM05D007014 ORTHO05D008894 3.4e-44 182.2 133 64.7
ATR0680G283 Amborella trichopoda HOM05D007014 ORTHO05D008894 4.4e-44 181.8 153 58.8
Zm00001eb044400 Zea mays HOM05D007014 ORTHO05D008894 1.2e-41 173.7 160 55.6
Zm00001eb044470 Zea mays HOM05D007014 ORTHO05D008894 2.7e-41 172.6 160 55.6
TWI36G1550 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 3.3e-39 165.6 153 52.3
Mapoly0101s0002 Marchantia polymorpha HOM05D007014 ORTHO05D008894 2.8e-38 162.5 152 54.6
Actinidia30478 Actinidia chinensis HOM05D007014 ORTHO05D008894 2.2e-35 152.9 98 74.5
Os10g0500400 Oryza sativa ssp. japonica HOM05D007014 ORTHO05D008894 1.1e-34 150.6 154 50.0
AagrBONN_evm.TU.Sc2ySwM_344.4393 Anthoceros agrestis HOM05D007014 ORTHO05D008894 1.6e-33 146.7 146 52.7
C08p52730 Brassica napus HOM05D007014 ORTHO05D008894 3.5e-33 145.6 102 66.7
A09p68280 Brassica napus HOM05D001041 ORTHO05D000846 1.7e-32 143.3 101 66.3
Lsat_1_v5_gn_8_132641 Lactuca sativa HOM05D007014 ORTHO05D008894 6.6e-32 141.4 93 72.0
Lalb_Chr01g0005301 Lupinus albus HOM05D007014 ORTHO05D008894 8.7e-32 141.0 90 75.6
QL12p004320 Quercus lobata HOM05D007014 ORTHO05D008894 4.2e-26 122.1 78 71.8
Sabra11G0072100 Salix brachista HOM05D000036 ORTHO05D000095 7.9e-25 117.9 81 67.9
Sabra15G0066900 Salix brachista HOM05D000036 ORTHO05D000095 7.9e-25 117.9 81 67.9
Sabra13G0113700 Salix brachista HOM05D000264 ORTHO05D000152 3.3e-23 112.5 81 67.9
Ciclev10023600m.g Citrus clementina HOM05D007014 ORTHO05D008894 1.6e-22 110.2 76 67.1
Hund01169 Selenicereus undatus HOM05D007014 ORTHO05D008894 9.0e-21 104.4 77 66.2
DCAR_013001 Daucus carota HOM05D007014 ORTHO05D008894 2.2e-19 99.8 86 58.1
PRCOL_00005877 Prasinoderma coloniale HOM05D007014 ORTHO05D008894 7.9e-17 91.3 101 46.5
AUR62037369 Chenopodium quinoa HOM05D007014 ORTHO05D008894 6.7e-16 88.2 67 59.7
SalBow1G7442 Salvia bowleyana HOM05D007014 ORTHO05D008894 1.3e-14 84.0 54 70.4
MELO3C013609.2 Cucumis melo HOM05D007014 ORTHO05D008894 4.1e-13 79.0 70 51.4
Pp3c2_27490 Physcomitrium patens HOM05D007014 ORTHO05D008894 3.8e-11 72.4 78 51.3


User provided reference genes

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