Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 2.5e-65 251.9 123 100.0
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 1.6e-40 169.5 124 73.4
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 5.5e-36 154.5 123 69.9
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 9.3e-36 153.7 123 68.3
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 1.2e-35 153.3 126 65.1
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 6.0e-35 151.0 123 65.9
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 7.9e-35 150.6 123 65.0
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 1.3e-34 149.8 106 71.7
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 1.8e-34 149.4 111 67.6
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 3.9e-34 148.3 106 71.7
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 5.1e-34 147.9 124 66.1
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 5.1e-34 147.9 126 62.7
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 5.1e-34 147.9 109 69.7
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 5.1e-34 147.9 124 60.5
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 8.7e-34 147.1 125 66.4
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.1e-33 146.7 123 65.0
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 1.1e-33 146.7 123 65.0
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.5e-33 146.4 123 65.0
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 1.9e-33 146.0 113 69.9
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 1.9e-33 146.0 123 65.0
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.9e-33 146.0 123 65.0
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.9e-33 146.0 123 65.0
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 2.5e-33 145.6 123 61.8
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 3.3e-33 145.2 123 65.0
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 4.3e-33 144.8 127 63.8
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 5.6e-33 144.4 123 65.0
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 5.6e-33 144.4 123 65.0
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 5.6e-33 144.4 123 64.2
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.3e-32 143.3 107 65.4
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 1.6e-32 142.9 91 79.1
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 1.6e-32 142.9 123 64.2
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 4.8e-32 141.4 124 62.9
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 6.2e-32 141.0 128 63.3
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 6.2e-32 141.0 88 77.3
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 1.4e-31 139.8 108 66.7
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 2.4e-31 139.0 120 64.2
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 2.4e-31 139.0 116 61.2
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 3.1e-31 138.7 123 62.6
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 4.0e-31 138.3 131 58.8
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 4.0e-31 138.3 90 76.7
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 6.9e-31 137.5 120 63.3
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 6.9e-31 137.5 91 76.9
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 6.9e-31 137.5 123 61.8
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 9.0e-31 137.1 118 63.6
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 9.0e-31 137.1 107 67.3
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 1.2e-30 136.7 128 58.6
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 1.2e-30 136.7 101 71.3
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 2.0e-30 136.0 88 77.3
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 2.6e-30 135.6 81 81.5
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 2.6e-30 135.6 103 68.0
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 2.6e-30 135.6 123 62.6
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 3.4e-30 135.2 82 80.5
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 4.5e-30 134.8 81 81.5
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 4.5e-30 134.8 81 81.5
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 4.5e-30 134.8 81 81.5
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 4.5e-30 134.8 81 81.5
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 5.8e-30 134.4 82 78.0
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 5.8e-30 134.4 123 61.8
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 7.6e-30 134.0 123 61.0
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 7.6e-30 134.0 86 77.9
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 1.0e-29 133.7 81 80.2
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 1.0e-29 133.7 83 81.9
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 1.0e-29 133.7 101 67.3
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 1.7e-29 132.9 117 62.4
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 1.7e-29 132.9 86 76.7
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 1.7e-29 132.9 86 77.9
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 2.2e-29 132.5 81 79.0
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 2.9e-29 132.1 86 72.1
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 4.9e-29 131.3 123 56.1
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 4.9e-29 131.3 82 78.0
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 6.5e-29 131.0 81 80.2
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 8.4e-29 130.6 79 81.0
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 8.4e-29 130.6 87 79.3
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 1.1e-28 130.2 88 75.0
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 1.4e-28 129.8 126 61.1
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 1.9e-28 129.4 74 85.1
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 2.5e-28 129.0 110 62.7
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 3.2e-28 128.6 108 62.0
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 3.2e-28 128.6 89 70.8
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 7.1e-28 127.5 89 69.7
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 9.3e-28 127.1 82 74.4
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 1.6e-27 126.3 82 76.8
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 1.8e-26 122.9 167 46.7
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 3.9e-26 121.7 74 79.7
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 6.7e-26 120.9 67 85.1
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 8.7e-26 120.6 71 78.9
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 5.7e-25 117.9 105 60.0
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 3.1e-23 112.1 85 64.7
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 6.9e-23 110.9 90 65.6
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 1.0e-21 107.1 73 71.2
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 5.0e-21 104.8 72 66.7
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 8.5e-21 104.0 109 50.5
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 4.2e-20 101.7 73 64.4
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 7.2e-20 100.9 48 93.8
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 2.1e-19 99.4 49 89.8
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 2.4e-15 85.9 83 55.4
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 7.7e-14 80.9 115 40.0
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 4.7e-11 71.6 98 40.8


User provided reference genes

Program Settings