Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12158 Avicennia marina HOM05D006292 ORTHO05D006110 8.3e-66 253.4 119 100.0
SGA_v2.0_scaffold198G41102 Striga asiatica HOM05D006292 ORTHO05D006110 1.8e-23 112.8 122 50.8
SGA_v2.0_scaffold6G03157 Striga asiatica HOM05D006292 ORTHO05D006110 9.7e-14 80.5 116 42.2
Hma1.2p1_2704F.1_g327130 Hydrangea macrophylla HOM05D006292 ORTHO05D006110 6.3e-13 77.8 117 41.9
Hma1.2p1_1063F.1_g253570 Hydrangea macrophylla HOM05D006292 ORTHO05D006110 1.1e-12 77.0 117 41.9
unitig_32.g10895 Utricularia gibba HOM05D006292 ORTHO05D006110 9.1e-12 73.9 119 42.9
Peaxi162Scf00045g00010 Petunia axillaris HOM05D006292 ORTHO05D006110 1.5e-11 73.2 122 39.3
Oeu017028.1 Olea europaea HOM05D006292 ORTHO05D006110 7.7e-11 70.9 89 42.7
Dinv25216 Davidia involucrata HOM05D000567 ORTHO05D000767 2.2e-10 69.3 87 47.1
SalBow6G3663 Salvia bowleyana HOM05D006292 ORTHO05D006110 2.9e-10 68.9 88 47.7
FAN13G0922 Fragaria x ananassa HOM05D006292 ORTHO05D006110 5.0e-10 68.2 117 38.5
Potri.003G092100 Populus trichocarpa HOM05D006292 ORTHO05D006110 8.5e-10 67.4 116 38.8
vmacro00329 Vaccinium macrocarpon HOM05D006292 ORTHO05D006110 1.4e-09 66.6 119 35.3
FvH4_5g22090 Fragaria vesca HOM05D006292 ORTHO05D006110 3.2e-09 65.5 117 36.8
Cc08_g02780 Coffea canephora HOM05D006292 ORTHO05D006110 4.2e-09 65.1 119 39.5
TWI60G0215 Tripterygium wilfordii HOM05D006292 ORTHO05D006110 4.2e-09 65.1 115 39.1
Atru.chr6.1708 Acer truncatum HOM05D006292 ORTHO05D006110 7.2e-09 64.3 117 38.5
TWI81G0365 Tripterygium wilfordii HOM05D006292 ORTHO05D006110 1.6e-08 63.2 86 43.0
Thecc.03G227700 Theobroma cacao HOM05D006292 ORTHO05D006110 2.7e-08 62.4 86 41.9
Migut.A01008 Erythranthe guttata HOM05D006292 ORTHO05D006110 3.6e-08 62.0 101 40.6
RcHm_v2.0_Chr7g0209741 Rosa chinensis HOM05D006292 ORTHO05D006110 3.6e-08 62.0 117 38.5
Actinidia14806 Actinidia chinensis HOM05D000567 ORTHO05D000767 6.1e-08 61.2 89 43.8
Peaxi162Scf00460g00032 Petunia axillaris HOM05D006292 ORTHO05D006110 6.1e-08 61.2 118 40.7
PGSC0003DMG400001160 Solanum tuberosum HOM05D006292 ORTHO05D006110 6.1e-08 61.2 120 34.2
Potri.001G142250 Populus trichocarpa HOM05D006292 ORTHO05D006110 1.4e-07 60.1 117 37.6
Gohir.A09G201400 Gossypium hirsutum HOM05D006292 ORTHO05D006110 1.8e-07 59.7 116 36.2
Ciclev10013401m.g Citrus clementina HOM05D006292 ORTHO05D006110 3.0e-07 58.9 101 39.6
Duzib068G0707 Durio zibethinus HOM05D006292 ORTHO05D006110 5.1e-07 58.2 112 39.3
Solyc08g076940.1 Solanum lycopersicum HOM05D006292 ORTHO05D006110 5.1e-07 58.2 86 39.5
Nn1g08042 Nelumbo nucifera HOM05D006292 ORTHO05D006110 6.7e-07 57.8 103 37.9
Prupe.5G036400 Prunus persica HOM05D006292 ORTHO05D006110 6.7e-07 57.8 115 35.7
Sopen06g021400 Solanum pennellii HOM05D006292 ORTHO05D006110 6.7e-07 57.8 110 40.0
Sopen08g025520 Solanum pennellii HOM05D006292 ORTHO05D006110 6.7e-07 57.8 86 39.5
Rhsim07G0127000 Rhododendron simsii HOM05D006292 ORTHO05D006110 8.8e-07 57.4 115 40.0
Rhsim11G0014800 Rhododendron simsii HOM05D006292 ORTHO05D006110 8.8e-07 57.4 99 39.4
Gohir.D09G193100 Gossypium hirsutum HOM05D006292 ORTHO05D006110 1.1e-06 57.0 87 41.4
Aqoxy3G02346 Aquilegia oxysepala HOM05D006292 ORTHO05D006110 1.5e-06 56.6 87 41.4
FAN08G0524 Fragaria x ananassa HOM05D006292 ORTHO05D006110 2.0e-06 56.2 79 44.3
FAN18G1495 Fragaria x ananassa HOM05D006292 ORTHO05D006110 2.0e-06 56.2 79 44.3
MD16G1274300 Malus domestica HOM05D006292 ORTHO05D006110 2.0e-06 56.2 116 36.2
CSS0029921 Camellia sinensis var. sinensis HOM05D006292 ORTHO05D006110 3.3e-06 55.5 98 40.8
CSS0047178 Camellia sinensis var. sinensis HOM05D006292 ORTHO05D006110 3.3e-06 55.5 98 40.8
FAN04G1003 Fragaria x ananassa HOM05D006292 ORTHO05D006110 5.7e-06 54.7 79 43.0
Gorai.006G216600 Gossypium raimondii HOM05D006292 ORTHO05D006110 7.4e-06 54.3 87 40.2
Lalb_Chr16g0381361 Lupinus albus HOM05D006292 ORTHO05D006110 9.7e-06 53.9 113 36.3


User provided reference genes

Program Settings