Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 1.1e-214 749.6 368 100.0
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 3.0e-191 671.8 364 88.2
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 8.8e-191 670.2 368 87.0
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 2.0e-187 659.1 369 85.4
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 2.3e-186 655.6 362 84.5
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 7.3e-185 650.6 366 84.4
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 6.1e-184 647.5 366 83.3
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 1.0e-183 646.7 362 85.9
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 1.8e-183 646.0 362 84.0
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 3.0e-183 645.2 362 84.0
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 1.2e-182 643.3 368 84.5
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 1.2e-182 643.3 366 82.8
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 1.5e-182 642.9 362 83.4
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 2.0e-182 642.5 362 83.1
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 2.6e-182 642.1 362 83.4
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 4.4e-182 641.3 364 84.3
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 9.8e-182 640.2 367 83.1
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.3e-181 639.8 367 83.7
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 1.3e-181 639.8 364 82.7
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 2.9e-181 638.6 362 82.9
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 2.9e-181 638.6 365 81.9
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 3.7e-181 638.3 363 84.0
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 3.7e-181 638.3 363 83.5
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 1.8e-180 636.0 367 82.8
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 3.2e-180 635.2 364 81.3
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 3.2e-180 635.2 363 83.2
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 4.1e-180 634.8 367 82.6
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 5.4e-180 634.4 363 82.9
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 7.0e-180 634.0 366 81.1
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 9.2e-180 633.6 363 82.4
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 9.2e-180 633.6 361 83.1
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 1.6e-179 632.9 365 82.2
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 2.0e-179 632.5 366 82.5
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 2.7e-179 632.1 376 81.1
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 5.9e-179 630.9 363 82.4
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 7.8e-179 630.6 362 81.5
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 7.8e-179 630.6 363 81.5
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 1.3e-178 629.8 363 82.1
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 1.3e-178 629.8 362 82.0
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 1.7e-178 629.4 361 82.5
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 3.9e-178 628.2 362 81.5
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 3.9e-178 628.2 364 80.5
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 6.6e-178 627.5 363 81.8
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 1.1e-177 626.7 362 82.3
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 1.1e-177 626.7 367 80.7
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 4.3e-177 624.8 362 82.9
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 4.3e-177 624.8 368 80.7
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 4.3e-177 624.8 366 80.3
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 1.2e-176 623.2 361 79.2
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 6.2e-176 620.9 366 80.1
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 6.2e-176 620.9 366 78.7
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 8.0e-176 620.5 363 81.3
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 8.0e-176 620.5 361 79.8
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 1.4e-175 619.8 363 82.1
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 1.4e-175 619.8 364 80.5
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 1.4e-175 619.8 363 79.6
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 1.2e-174 616.7 363 80.7
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 4.9e-173 611.3 361 80.3
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 6.4e-173 610.9 360 79.4
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 2.0e-171 605.9 371 78.2
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 7.3e-169 597.4 362 79.8
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 1.2e-168 596.7 363 77.4
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 1.6e-168 596.3 363 77.4
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 6.2e-168 594.3 393 75.1
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 8.9e-167 590.5 382 75.7
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 3.4e-166 588.6 381 75.3
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 7.5e-166 587.4 353 77.3
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 2.2e-165 585.9 363 76.6
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 3.2e-164 582.0 363 76.3
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 1.2e-163 580.1 362 75.4
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 2.1e-163 579.3 362 75.1
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 3.5e-163 578.6 360 75.8
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 2.3e-162 575.9 369 73.7
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 5.1e-162 574.7 362 75.1
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 1.9e-161 572.8 362 75.1
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 3.3e-161 572.0 362 74.6
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 3.6e-160 568.5 362 74.0
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 1.8e-159 566.2 362 73.5
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 2.4e-159 565.8 364 73.6
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 3.1e-159 565.5 381 71.9
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 5.2e-159 564.7 362 73.8
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 7.6e-158 560.8 358 74.0
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 3.0e-154 548.9 363 71.3
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 2.1e-152 542.7 353 73.4
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 9.3e-148 527.3 300 84.3
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 6.6e-146 521.2 284 87.3
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 8.7e-146 520.8 303 81.2
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 9.9e-142 507.3 365 65.2
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 1.1e-140 503.8 284 84.5
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 8.7e-138 494.2 365 64.9
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 1.1e-137 493.8 364 65.4
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 1.8e-135 486.5 271 83.4
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 2.4e-135 486.1 369 64.5
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 2.3e-130 469.5 306 73.9
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 3.0e-130 469.2 267 84.3
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 7.2e-116 421.4 240 84.6
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 5.7e-113 411.8 343 59.8
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 1.3e-112 410.6 227 85.9
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 5.9e-110 401.7 226 82.3
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 1.2e-107 394.0 223 81.6
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 2.6e-81 306.6 185 78.9
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 4.7e-67 259.2 212 62.3
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 5.2e-50 202.6 111 83.8
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 2.2e-48 197.2 117 76.9
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 4.9e-48 196.1 114 79.8
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 7.8e-46 188.7 119 73.9
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.3e-45 188.0 117 74.4
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.3e-45 188.0 117 74.4
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 2.3e-45 187.2 124 72.6
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 8.1e-43 178.7 119 71.4
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 3.3e-36 156.8 94 79.8
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 2.3e-29 134.0 90 66.7
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 9.0e-18 95.5 57 73.7
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 1.8e-13 81.3 55 67.3
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 3.0e-13 80.5 55 65.5
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 6.7e-13 79.3 55 67.3
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 1.9e-12 77.8 305 25.9
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 9.6e-12 75.5 55 63.6
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 2.2e-08 64.3 43 65.1
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 2.7e-06 57.4 34 76.5


User provided reference genes

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