Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12109 Avicennia marina HOM05D004923 ORTHO05D005940 0.0e+00 1130.9 636 100.0
SGA_v2.0_scaffold104G30165 Striga asiatica HOM05D004923 ORTHO05D005940 3.5e-142 509.6 637 49.9
Oeu020434.1 Olea europaea HOM05D004923 ORTHO05D005940 1.5e-116 424.5 636 45.0
SalBow6G2889 Salvia bowleyana HOM05D004923 ORTHO05D005940 8.6e-109 398.7 638 45.1
Migut.A01112 Erythranthe guttata HOM05D004923 ORTHO05D005940 4.1e-103 379.8 638 44.7
Sopen01g053000 Solanum pennellii HOM05D004923 ORTHO05D005940 3.9e-93 346.7 661 38.0
Hma1.2p1_0702F.1_g206060 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 4.9e-88 329.7 617 39.2
CSS0000935 Camellia sinensis var. sinensis HOM05D004923 ORTHO05D005940 3.5e-86 323.6 656 37.3
Solyc01g110960.4 Solanum lycopersicum HOM05D004923 ORTHO05D005940 1.1e-82 312.0 600 36.8
unitig_8.g3020 Utricularia gibba HOM05D004923 ORTHO05D005940 1.1e-82 312.0 637 36.3
Hma1.2p1_2453F.1_g322410 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 1.4e-82 311.6 617 37.9
Cc02_g32730 Coffea canephora HOM05D004923 ORTHO05D005940 4.4e-81 306.6 649 39.3
Dinv40234 Davidia involucrata HOM05D004923 ORTHO05D005940 7.8e-78 295.8 596 37.9
Actinidia19810 Actinidia chinensis HOM05D004923 ORTHO05D005940 3.6e-75 287.0 642 36.0
PGSC0003DMG400001646 Solanum tuberosum HOM05D004923 ORTHO05D005940 5.3e-74 283.1 660 33.9
Rhsim05G0146200 Rhododendron simsii HOM05D004923 ORTHO05D005940 5.1e-69 266.5 631 35.8
Haze_04263 Corylus avellana HOM05D004923 ORTHO05D005940 6.7e-61 239.6 608 33.4
Cfa006523 Carpinus fangiana HOM05D004923 ORTHO05D005940 8.7e-61 239.2 647 32.5
Oeu019603.1 Olea europaea HOM05D004923 ORTHO05D005940 1.9e-60 238.0 314 46.8
CiPaw.07G012700 Carya illinoinensis HOM05D004923 ORTHO05D005940 9.6e-60 235.7 641 32.9
HanXRQChr05g0158391 Helianthus annuus HOM05D004923 ORTHO05D005940 4.0e-58 230.3 638 32.3
GSVIVG01022015001 Vitis vinifera HOM05D004923 ORTHO05D005940 2.3e-53 214.5 642 32.1
Gohir.A08G212800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 8.2e-51 206.1 679 28.4
CARHR185930 Cardamine hirsuta HOM05D004923 ORTHO05D005940 2.3e-45 188.0 636 29.7
TAR362G1085 Trochodendron aralioides HOM05D004923 ORTHO05D005940 3.7e-43 180.6 753 26.7
Gohir.D08G229800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 4.8e-43 180.3 675 27.3
Gorai.004G244000 Gossypium raimondii HOM05D004923 ORTHO05D005940 6.3e-43 179.9 675 27.3
QL03p002854 Quercus lobata HOM05D004923 ORTHO05D005940 1.4e-42 178.7 639 29.0
Sc06g0003440 Simmondsia chinensis HOM05D004923 ORTHO05D005940 1.4e-42 178.7 674 28.9
Sabra05G0039600 Salix brachista HOM05D004923 ORTHO05D005940 9.1e-42 176.0 604 29.3
QL03p003582 Quercus lobata HOM05D004923 ORTHO05D005940 7.7e-41 172.9 639 29.3
Sp3g03950 Schrenkiella parvula HOM05D004923 ORTHO05D005940 1.4e-39 168.7 648 28.7
Eucgr.B02029 Eucalyptus grandis HOM05D004923 ORTHO05D005940 5.5e-39 166.8 652 27.1
Ciclev10000602m.g Citrus clementina HOM05D004923 ORTHO05D005940 7.9e-38 162.9 643 27.8
Manes.09G161700 Manihot esculenta HOM05D004923 ORTHO05D005940 7.9e-38 162.9 634 27.1
Duzib177G0588 Durio zibethinus HOM05D004923 ORTHO05D005940 8.8e-37 159.5 678 28.0
Lalb_Chr02g0148481 Lupinus albus HOM05D004923 ORTHO05D005940 8.8e-37 159.5 610 26.9
PGR083G0910 Punica granatum HOM05D004923 ORTHO05D005940 8.8e-37 159.5 606 29.2
ClCG02G016160 Citrullus lanatus HOM05D004923 ORTHO05D005940 1.5e-36 158.7 640 28.1
Thecc.05G297900 Theobroma cacao HOM05D004923 ORTHO05D005940 1.5e-36 158.7 685 27.4
BcaNung04359 Brassica carinata HOM05D004923 ORTHO05D005940 3.3e-36 157.5 645 27.6
CAN.G1329.24 Capsicum annuum HOM05D004923 ORTHO05D005940 3.3e-36 157.5 657 28.3
Lj9P678T27 Lonicera japonica HOM05D004923 ORTHO05D005940 4.4e-36 157.1 442 31.4
MELO3C004316.2 Cucumis melo HOM05D004923 ORTHO05D005940 5.7e-36 156.8 639 28.3
AT5G27330 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 1.3e-35 155.6 657 27.7
Nn4g26097 Nelumbo nucifera HOM05D004923 ORTHO05D005940 2.2e-35 154.8 759 26.0
Sed0008414 Sechium edule HOM05D004923 ORTHO05D005940 4.8e-35 153.7 646 28.2
HanXRQChr15g0493471 Helianthus annuus HOM05D004923 ORTHO05D005940 1.1e-34 152.5 628 28.3
AL3G15510 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 1.8e-34 151.8 649 27.7
THA.LOC104818671 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 9.1e-34 149.4 648 28.1
TWI56G0946 Tripterygium wilfordii HOM05D004923 ORTHO05D005940 3.4e-33 147.5 642 26.8
Cpa.g.sc84.119 Carica papaya HOM05D004923 ORTHO05D005940 5.0e-32 143.7 622 26.7
arahy.Tifrunner.gnm1.ann1.96LETV Arachis hypogaea HOM05D004923 ORTHO05D005940 6.5e-32 143.3 639 26.9
AUR62000899 Chenopodium quinoa HOM05D004923 ORTHO05D005940 1.1e-31 142.5 630 28.1
MBI18_g16961_MAGBIO Magnolia biondii HOM05D004923 ORTHO05D005940 1.1e-31 142.5 686 26.1
AUR62005075 Chenopodium quinoa HOM05D004923 ORTHO05D005940 1.4e-31 142.1 627 27.1
Prupe.6G332700 Prunus persica HOM05D004923 ORTHO05D005940 4.2e-31 140.6 654 26.8
CiPaw.08G168100 Carya illinoinensis HOM05D004923 ORTHO05D005940 1.2e-30 139.0 261 38.3
AT3G05130 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 3.6e-30 137.5 650 27.1
Potri.013G028600 Populus trichocarpa HOM05D004923 ORTHO05D005940 3.6e-30 137.5 637 27.0
Sp2g20550 Schrenkiella parvula HOM05D004923 ORTHO05D005940 8.0e-30 136.3 656 27.0
Glyma.10G157900 Glycine max HOM05D004923 ORTHO05D005940 1.4e-29 135.6 636 28.0
Gohir.A11G260600 Gossypium hirsutum HOM05D004923 ORTHO05D005940 2.3e-29 134.8 599 27.0
Gohir.D11G270900 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.5e-28 132.1 627 27.0
arahy.Tifrunner.gnm1.ann1.VPW6I2 Arachis hypogaea HOM05D004923 ORTHO05D005940 2.6e-28 131.3 641 26.5
Ah.04g159880 Amaranthus hybridus HOM05D004923 ORTHO05D005940 5.7e-28 130.2 643 27.4
Nn4g26098 Nelumbo nucifera HOM05D004923 ORTHO05D005940 7.4e-28 129.8 756 25.0
Lsat_1_v5_gn_5_38100 Lactuca sativa HOM05D004923 ORTHO05D005940 9.7e-28 129.4 647 25.3
Nitab4.5_0000003g0420 Nicotiana tabacum HOM05D004923 ORTHO05D005940 2.2e-27 128.3 660 26.7
Sabra13G0028900 Salix brachista HOM05D004923 ORTHO05D005940 4.8e-27 127.1 638 25.2
C05p62100 Brassica napus HOM05D004923 ORTHO05D005940 6.3e-27 126.7 639 25.8
BolC5t34868H Brassica oleracea HOM05D004923 ORTHO05D005940 6.3e-27 126.7 639 25.8
Peaxi162Scf00016g10236 Petunia axillaris HOM05D004923 ORTHO05D005940 1.1e-26 125.9 610 26.9
Thhalv10003823m.g Eutrema salsugineum HOM05D004923 ORTHO05D005940 2.4e-26 124.8 653 27.1
THA.LOC104821702 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 2.6e-25 121.3 602 26.9
C07p40590 Brassica napus HOM05D004923 ORTHO05D005940 3.5e-25 120.9 649 25.6
FAN09G1938 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.0e-24 119.4 642 25.2
Carub.0006s2521 Capsella rubella HOM05D004923 ORTHO05D005940 2.2e-24 118.2 667 27.4
DCAR_029454 Daucus carota HOM05D004923 ORTHO05D005940 2.2e-24 118.2 636 28.8
Peaxi162Scf00413g00516 Petunia axillaris HOM05D004923 ORTHO05D005940 6.5e-24 116.7 287 30.3
Gorai.007G291400 Gossypium raimondii HOM05D004923 ORTHO05D005940 1.9e-23 115.2 627 25.8
Carub.0003s0437 Capsella rubella HOM05D004923 ORTHO05D005940 4.7e-22 110.5 649 25.3
Lj8C55T15 Lonicera japonica HOM05D004923 ORTHO05D005940 1.0e-21 109.4 306 35.0
Nitab4.5_0008768g0010 Nicotiana tabacum HOM05D004923 ORTHO05D005940 2.3e-21 108.2 658 25.2
ECA246G1289 Erigeron canadensis HOM05D004923 ORTHO05D005940 3.0e-21 107.8 781 24.1
Manes.08G124600 Manihot esculenta HOM05D004923 ORTHO05D005940 6.7e-21 106.7 327 29.7
Aqoxy2G03170 Aquilegia oxysepala HOM05D004923 ORTHO05D005940 8.8e-21 106.3 676 23.7
CANSAT54G1324 Cannabis sativa HOM05D004923 ORTHO05D005940 1.2e-20 105.9 760 24.3
AL6G39740 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 2.0e-20 105.1 649 26.5
CsaV3_2G004820 Cucumis sativus L. HOM05D004923 ORTHO05D005940 2.0e-20 105.1 639 26.0
arahy.Tifrunner.gnm1.ann1.S9CKM7 Arachis hypogaea HOM05D004923 ORTHO05D005940 3.3e-20 104.4 602 23.8
Glyma.20G230700 Glycine max HOM05D004923 ORTHO05D005940 5.7e-20 103.6 638 25.1
Phvul.007G183300 Phaseolus vulgaris HOM05D004923 ORTHO05D005940 4.8e-19 100.5 379 27.7
FAN02G0211 Fragaria x ananassa HOM05D004923 ORTHO05D005940 8.2e-19 99.8 643 24.3
Lj5g0013750 Lotus japonicus HOM05D004923 ORTHO05D005940 2.4e-18 98.2 706 24.2
COL.COLO4_13559 Corchorus olitorius HOM05D004923 ORTHO05D005940 4.1e-18 97.4 204 32.4
ECA233G0604 Erigeron canadensis HOM05D004923 ORTHO05D005940 4.1e-18 97.4 601 24.5
BcaNung02477 Brassica carinata HOM05D004923 ORTHO05D005940 9.1e-18 96.3 647 24.0
RcHm_v2.0_Chr3g0453461 Rosa chinensis HOM05D004923 ORTHO05D005940 1.2e-17 95.9 649 23.3
MD12G1227100 Malus domestica HOM05D004923 ORTHO05D005940 3.5e-17 94.4 605 25.5
FAN14G0846 Fragaria x ananassa HOM05D004923 ORTHO05D005940 2.9e-16 91.3 643 23.6
CARHR079450 Cardamine hirsuta HOM05D004923 ORTHO05D005940 6.5e-16 90.1 251 31.9
FAN05G2617 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.9e-15 88.6 644 23.3
Peaxi162Scf00351g00530 Petunia axillaris HOM05D004923 ORTHO05D005940 2.5e-15 88.2 274 29.2
FAN05G5260 Fragaria x ananassa HOM05D004923 ORTHO05D005940 3.2e-15 87.8 644 23.4
FvH4_6g04961 Fragaria vesca HOM05D004923 ORTHO05D005940 4.2e-15 87.4 643 23.2
CDE09G0746 Ceratophyllum demersum HOM05D056443 ORTHO05D005940 8.0e-14 83.2 680 22.1
VMungo0720G2495 Vigna mungo HOM05D004923 ORTHO05D005940 1.8e-13 82.0 634 23.7
Potri.005G040500 Populus trichocarpa HOM05D004923 ORTHO05D005940 3.0e-13 81.3 637 24.8
Atru.chr5.1952 Acer truncatum HOM05D000107 ORTHO05D000062 4.0e-13 80.9 240 31.2
A06p37630 Brassica napus HOM05D004923 ORTHO05D005940 6.8e-13 80.1 265 27.2
Atru.chr2.532 Acer truncatum HOM05D004923 ORTHO05D005940 4.4e-12 77.4 660 23.3
BraA05t23008Z Brassica rapa HOM05D004923 ORTHO05D005940 5.7e-12 77.0 635 23.9
Ca_10079_v3 Cicer arietinum L. HOM05D004923 ORTHO05D005940 7.5e-12 76.6 176 31.2
CAN.G65.101 Capsicum annuum HOM05D004923 ORTHO05D005940 9.8e-12 76.3 146 36.3
Aa31LG11G9060 Aethionema arabicum HOM05D004923 ORTHO05D005940 4.8e-11 73.9 646 23.1
TPR.G2744 Trifolium pratense HOM05D004923 ORTHO05D005940 6.3e-11 73.6 161 35.4
Lsat_1_v5_gn_4_137721 Lactuca sativa HOM05D004923 ORTHO05D005940 4.1e-10 70.9 259 27.0
Psat6g148400 Pisum sativum HOM05D004923 ORTHO05D005940 7.0e-10 70.1 161 32.9
MD04G1212300 Malus domestica HOM05D004923 ORTHO05D005940 2.0e-09 68.6 639 24.4
Ah.04g159900 Amaranthus hybridus HOM05D004923 ORTHO05D005940 1.0e-08 66.2 635 23.1
PSO151G0084 Papaver somniferum HOM05D004923 ORTHO05D005940 1.3e-08 65.9 652 21.5
PSO302G0039 Papaver somniferum HOM05D004923 ORTHO05D005940 3.8e-08 64.3 131 36.6
CDE02G2189 Ceratophyllum demersum HOM05D056443 ORTHO05D005940 1.9e-07 62.0 681 20.7
PSO170G6876 Papaver somniferum HOM05D004923 ORTHO05D005940 2.5e-07 61.6 450 22.4
Actinidia00480 Actinidia chinensis HOM05D001349 ORTHO05D005940 4.7e-06 57.4 71 52.1
PSO151G0007 Papaver somniferum HOM05D004923 ORTHO05D005940 4.7e-06 57.4 572 21.5
PSO151G0141 Papaver somniferum HOM05D004923 ORTHO05D005940 4.7e-06 57.4 572 21.5


User provided reference genes

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