Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12104 Avicennia marina HOM05D006762 ORTHO05D003505 2.9e-43 178.3 102 100.0
SalBow6G0204 Salvia bowleyana HOM05D006762 ORTHO05D003505 2.3e-27 125.6 100 80.0
SalBow6G1716 Salvia bowleyana HOM05D006762 ORTHO05D003505 1.5e-26 122.9 100 80.0
Migut.A01106 Erythranthe guttata HOM05D006762 ORTHO05D003505 5.5e-26 120.9 100 76.0
SalBow4G0096 Salvia bowleyana HOM05D006762 ORTHO05D003505 1.7e-22 109.4 91 78.0
SalBow4G2872 Salvia bowleyana HOM05D006762 ORTHO05D003505 1.7e-22 109.4 91 78.0
Sopen08g027040 Solanum pennellii HOM05D006762 ORTHO05D003505 8.6e-19 97.1 96 62.5
PGSC0003DMG400004817 Solanum tuberosum HOM05D006762 ORTHO05D003505 1.5e-18 96.3 95 63.2
CAN.G1058.38 Capsicum annuum HOM05D006762 ORTHO05D003505 1.9e-18 95.9 98 65.3
Lj8A263T41 Lonicera japonica HOM05D006762 ORTHO05D003505 1.2e-17 93.2 105 61.9
Ciclev10023003m.g Citrus clementina HOM05D006762 ORTHO05D003505 1.6e-17 92.8 95 62.1
Cc08_g12340 Coffea canephora HOM05D006762 ORTHO05D003505 6.1e-17 90.9 98 63.3
Actinidia27471 Actinidia chinensis HOM05D006762 ORTHO05D003505 1.0e-16 90.1 100 60.0
Hund14549 Selenicereus undatus HOM05D006762 ORTHO05D003505 1.0e-16 90.1 102 55.9
Rhsim07G0109700 Rhododendron simsii HOM05D006762 ORTHO05D003505 2.3e-16 89.0 98 60.2
QL12p012005 Quercus lobata HOM05D006762 ORTHO05D003505 3.0e-16 88.6 95 61.1
Oeu020431.1 Olea europaea HOM05D006762 ORTHO05D003505 4.0e-16 88.2 95 63.2
Aa31csc22G110 Aethionema arabicum HOM05D006762 ORTHO05D003505 5.2e-16 87.8 101 57.4
Lsat_1_v5_gn_6_90840 Lactuca sativa HOM05D006762 ORTHO05D003505 8.9e-16 87.0 102 54.9
Solyc08g078560.3 Solanum lycopersicum HOM05D006762 ORTHO05D003505 1.2e-15 86.7 95 58.9
Cpa.g.sc29.168 Carica papaya HOM05D006762 ORTHO05D003505 2.0e-15 85.9 97 59.8
COL.COLO4_37166 Corchorus olitorius HOM05D006762 ORTHO05D003505 2.6e-15 85.5 98 65.3
GSVIVG01006992001 Vitis vinifera HOM05D006762 ORTHO05D003505 5.8e-15 84.3 100 59.0
Thhalv10001082m.g Eutrema salsugineum HOM05D006762 ORTHO05D003505 7.5e-15 84.0 98 56.1
CARHR173910 Cardamine hirsuta HOM05D006762 ORTHO05D003505 9.8e-15 83.6 101 55.4
TWI81G0572 Tripterygium wilfordii HOM05D006762 ORTHO05D003505 9.8e-15 83.6 103 56.3
vmacro21548 Vaccinium macrocarpon HOM05D006762 ORTHO05D003505 9.8e-15 83.6 100 55.0
CANSAT21G1567 Cannabis sativa HOM05D006762 ORTHO05D003505 1.3e-14 83.2 102 54.9
ECA240G1429 Erigeron canadensis HOM05D006762 ORTHO05D003505 2.2e-14 82.4 102 52.9
BcaC06g31382 Brassica carinata HOM05D006762 ORTHO05D003505 2.9e-14 82.0 98 54.1
GSVIVG01004713001 Vitis vinifera HOM05D006762 ORTHO05D003505 3.7e-14 81.6 100 58.0
Sp2g12170 Schrenkiella parvula HOM05D006762 ORTHO05D003505 4.9e-14 81.3 98 55.1
unitig_21.g20319 Utricularia gibba HOM05D006762 ORTHO05D003505 6.4e-14 80.9 100 55.0
BcaC06g31384 Brassica carinata HOM05D006762 ORTHO05D003505 1.1e-13 80.1 98 55.1
BraA06t27376Z Brassica rapa HOM05D006762 ORTHO05D003505 1.1e-13 80.1 99 52.5
HanXRQChr03g0087771 Helianthus annuus HOM05D006762 ORTHO05D003505 1.1e-13 80.1 97 55.7
Carub.0007s2409 Capsella rubella HOM05D006762 ORTHO05D003505 1.4e-13 79.7 96 54.2
THA.LOC104812806 Tarenaya hassleriana HOM05D006762 ORTHO05D003505 1.4e-13 79.7 102 53.9
AT5G47455 Arabidopsis thaliana HOM05D006762 ORTHO05D003505 2.4e-13 79.0 103 54.4
Carub.0008s0032 Capsella rubella HOM05D006762 ORTHO05D003505 2.4e-13 79.0 96 57.3
Glyma.05G060100 Glycine max HOM05D006762 ORTHO05D003505 2.4e-13 79.0 97 57.7
AL7G37400 Arabidopsis lyrata HOM05D006762 ORTHO05D003505 3.2e-13 78.6 95 53.7
MD04G1063100 Malus domestica HOM05D006762 ORTHO05D003505 3.2e-13 78.6 99 55.6
TWI60G1284 Tripterygium wilfordii HOM05D006762 ORTHO05D003505 3.2e-13 78.6 106 55.7
TAR629G0824 Trochodendron aralioides HOM05D006762 ORTHO05D003505 3.2e-13 78.6 98 57.1
Dinv39153 Davidia involucrata HOM05D000502 ORTHO05D000356 4.1e-13 78.2 87 62.1
Duzib084G1100 Durio zibethinus HOM05D006762 ORTHO05D003505 4.1e-13 78.2 98 58.2
Thecc.03G250100 Theobroma cacao HOM05D006762 ORTHO05D003505 4.1e-13 78.2 101 57.4
A06p45070 Brassica napus HOM05D006762 ORTHO05D003505 5.4e-13 77.8 98 52.0
Lalb_Chr16g0386731 Lupinus albus HOM05D006762 ORTHO05D003505 5.4e-13 77.8 95 60.0
Manes.01G081200 Manihot esculenta HOM05D006762 ORTHO05D003505 5.4e-13 77.8 97 56.7
BcaC03g16962 Brassica carinata HOM05D006762 ORTHO05D003505 7.0e-13 77.4 98 53.1
C02p48680 Brassica napus HOM05D006762 ORTHO05D003505 7.0e-13 77.4 98 53.1
BolC2t10960H Brassica oleracea HOM05D006762 ORTHO05D003505 7.0e-13 77.4 98 53.1
Duzib205G1027 Durio zibethinus HOM05D006762 ORTHO05D003505 7.0e-13 77.4 99 54.5
AL8G10530 Arabidopsis lyrata HOM05D006762 ORTHO05D003505 9.2e-13 77.0 96 56.2
A02p31340 Brassica napus HOM05D006762 ORTHO05D003505 9.2e-13 77.0 95 53.7
BraA02t08136Z Brassica rapa HOM05D006762 ORTHO05D003505 9.2e-13 77.0 95 53.7
Nn6g33933 Nelumbo nucifera HOM05D006762 ORTHO05D003505 9.2e-13 77.0 100 55.0
Sabra16G0215100 Salix brachista HOM05D006762 ORTHO05D003505 1.2e-12 76.6 97 56.7
BolC7t43652H Brassica oleracea HOM05D006762 ORTHO05D003505 1.6e-12 76.3 95 52.6
Potri.001G333800 Populus trichocarpa HOM05D006762 ORTHO05D003505 2.0e-12 75.9 96 57.3
Gohir.A08G169800 Gossypium hirsutum HOM05D006762 ORTHO05D003505 2.7e-12 75.5 97 58.8
Gohir.D08G188100 Gossypium hirsutum HOM05D006762 ORTHO05D003505 2.7e-12 75.5 97 58.8
Glyma.17G142500 Glycine max HOM05D006762 ORTHO05D003505 3.5e-12 75.1 97 56.7
Prupe.5G068300 Prunus persica HOM05D006762 ORTHO05D003505 6.0e-12 74.3 98 53.1
Aqoxy7G00783 Aquilegia oxysepala HOM05D006762 ORTHO05D003505 7.8e-12 73.9 100 51.0
BcaC06g34251 Brassica carinata HOM05D006762 ORTHO05D003505 7.8e-12 73.9 94 52.1
C07p31100 Brassica napus HOM05D006762 ORTHO05D003505 7.8e-12 73.9 94 52.1
CiPaw.11G079800 Carya illinoinensis HOM05D006762 ORTHO05D003505 7.8e-12 73.9 100 53.0
CiPaw.12G051800 Carya illinoinensis HOM05D006762 ORTHO05D003505 7.8e-12 73.9 101 52.5
TPR.G37627 Trifolium pratense HOM05D006762 ORTHO05D003505 1.0e-11 73.6 95 56.8
FAN04G0434 Fragaria x ananassa HOM05D006762 ORTHO05D003505 2.3e-11 72.4 95 51.6
Gorai.004G198000 Gossypium raimondii HOM05D006762 ORTHO05D003505 2.3e-11 72.4 97 57.7
Medtr4g100820 Medicago truncatula HOM05D006762 ORTHO05D003505 2.3e-11 72.4 95 55.8
MELO3C013933.2 Cucumis melo HOM05D006762 ORTHO05D003505 5.0e-11 71.2 97 53.6
FAN08G1018 Fragaria x ananassa HOM05D006762 ORTHO05D003505 5.0e-11 71.2 95 50.5
FAN13G0097 Fragaria x ananassa HOM05D000502 ORTHO05D000356 5.0e-11 71.2 98 50.0
FAN18G2762 Fragaria x ananassa HOM05D006762 ORTHO05D003505 5.0e-11 71.2 95 50.5
CsaV3_3G002630 Cucumis sativus L. HOM05D006762 ORTHO05D003505 6.6e-11 70.9 97 53.6
ClCG10G002600 Citrullus lanatus HOM05D006762 ORTHO05D003505 8.6e-11 70.5 97 53.6
FvH4_5g19060 Fragaria vesca HOM05D006762 ORTHO05D003505 8.6e-11 70.5 99 48.5
AT4G17310 Arabidopsis thaliana HOM05D006762 ORTHO05D003505 1.1e-10 70.1 96 50.0
Lalb_Chr09g0330061 Lupinus albus HOM05D006762 ORTHO05D003505 1.1e-10 70.1 95 51.6
RcHm_v2.0_Chr7g0203511 Rosa chinensis HOM05D006762 ORTHO05D003505 1.9e-10 69.3 95 53.7
Potri.017G068600 Populus trichocarpa HOM05D006762 ORTHO05D003505 2.5e-10 68.9 96 51.0
Psat4g072480 Pisum sativum HOM05D006762 ORTHO05D003505 3.3e-10 68.6 95 54.7
Ca_21971_v3 Cicer arietinum L. HOM05D006762 ORTHO05D003505 5.6e-10 67.8 96 57.3
Phvul.003G221200 Phaseolus vulgaris HOM05D006762 ORTHO05D003505 1.2e-09 66.6 96 53.1
PGR031G2035 Punica granatum HOM05D006762 ORTHO05D003505 2.1e-09 65.9 96 52.1
Sed0021009 Sechium edule HOM05D006762 ORTHO05D003505 2.1e-09 65.9 97 52.6
ATR0317G117 Amborella trichopoda HOM05D006762 ORTHO05D003505 3.6e-09 65.1 100 52.0
Lj4g0004620 Lotus japonicus HOM05D006762 ORTHO05D003505 8.0e-09 63.9 97 52.6
Manes.02G040300 Manihot esculenta HOM05D006762 ORTHO05D003505 6.8e-08 60.8 96 47.9
CSS0021998 Camellia sinensis var. sinensis HOM05D006762 ORTHO05D003505 8.9e-08 60.5 97 49.5
Nitab4.5_0000882g0040 Nicotiana tabacum HOM05D006762 ORTHO05D003505 8.9e-08 60.5 97 51.5
Glyma.18G109000 Glycine max HOM05D006762 ORTHO05D003505 2.6e-07 58.9 97 50.5
arahy.Tifrunner.gnm1.ann1.A5XQNM Arachis hypogaea HOM05D006762 ORTHO05D003505 4.4e-07 58.2 96 52.1
HPP92_014491 Vanilla planifolia HOM05D006762 ORTHO05D003505 5.8e-07 57.8 107 48.6
QL04p035820 Quercus lobata HOM05D006762 ORTHO05D003505 1.7e-06 56.2 97 49.5
Prupe.1G447500 Prunus persica HOM05D007429 ORTHO05D003505 2.9e-06 55.5 96 44.8
Aa31LG3G15560 Aethionema arabicum HOM05D007429 ORTHO05D003505 4.9e-06 54.7 95 44.2
arahy.Tifrunner.gnm1.ann1.QP3VPD Arachis hypogaea HOM05D006762 ORTHO05D003505 4.9e-06 54.7 96 52.1
FvH4_2g35460 Fragaria vesca HOM05D007429 ORTHO05D003505 4.9e-06 54.7 97 46.4
Sed0003359 Sechium edule HOM05D007429 ORTHO05D003505 6.4e-06 54.3 96 44.8
FAN27G3027 Fragaria x ananassa HOM05D007429 ORTHO05D003505 8.3e-06 53.9 96 46.9
Glyma.17G210100 Glycine max HOM05D006762 ORTHO05D003505 8.3e-06 53.9 96 49.0
MD15G1092600 Malus domestica HOM05D007429 ORTHO05D003505 8.3e-06 53.9 95 43.2
Nn6g35292 Nelumbo nucifera HOM05D007429 ORTHO05D003505 8.3e-06 53.9 96 41.7


User provided reference genes

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