Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 4.5e-119 431.4 241 100.0
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 6.6e-94 347.8 241 77.2
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 3.7e-89 332.0 241 73.9
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 4.9e-89 331.6 241 74.7
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 4.0e-83 312.0 224 71.4
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 5.2e-83 311.6 220 72.3
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 2.0e-82 309.7 224 71.0
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 3.4e-82 308.9 231 72.7
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 2.2e-81 306.2 238 66.8
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 3.7e-81 305.4 234 68.8
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 4.9e-81 305.1 240 67.5
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 4.9e-81 305.1 238 69.3
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 4.9e-81 305.1 244 67.2
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 8.4e-81 304.3 228 74.1
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 3.2e-80 302.4 234 67.5
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 4.1e-80 302.0 243 67.9
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 4.1e-80 302.0 240 66.7
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 9.2e-80 300.8 243 67.5
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 9.2e-80 300.8 240 65.0
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 2.7e-79 299.3 219 68.9
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 6.0e-79 298.1 235 67.2
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 1.0e-78 297.4 237 68.8
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 1.3e-78 297.0 213 71.8
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 1.7e-78 296.6 213 70.9
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 3.9e-78 295.4 247 63.6
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 5.1e-78 295.0 235 69.4
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 5.1e-78 295.0 238 66.8
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 5.1e-78 295.0 229 68.1
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 1.5e-77 293.5 215 70.7
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 1.9e-77 293.1 249 64.3
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 2.5e-77 292.7 223 68.6
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 3.3e-77 292.4 227 68.3
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 3.3e-77 292.4 221 69.7
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 4.3e-77 292.0 218 69.7
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 7.3e-77 291.2 240 64.2
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 7.3e-77 291.2 212 71.2
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 7.3e-77 291.2 213 69.0
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 9.6e-77 290.8 247 64.0
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 1.2e-76 290.4 223 67.7
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 1.2e-76 290.4 215 70.2
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 1.2e-76 290.4 247 64.0
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.6e-76 290.0 238 65.1
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.6e-76 290.0 238 65.1
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.6e-76 290.0 247 64.0
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 2.8e-76 289.3 246 62.6
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 2.8e-76 289.3 247 63.6
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 4.7e-76 288.5 240 63.8
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 6.2e-76 288.1 247 63.2
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 8.1e-76 287.7 238 64.7
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 8.1e-76 287.7 223 68.2
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 1.1e-75 287.3 241 63.5
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 1.1e-75 287.3 222 67.6
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 1.1e-75 287.3 236 64.8
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 1.1e-75 287.3 219 68.9
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 1.4e-75 287.0 222 67.6
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 1.4e-75 287.0 221 68.8
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 1.4e-75 287.0 214 70.1
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 1.8e-75 286.6 238 68.1
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 1.8e-75 286.6 227 66.5
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 2.4e-75 286.2 241 63.5
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 2.4e-75 286.2 241 63.1
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 2.4e-75 286.2 241 63.5
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 2.4e-75 286.2 241 63.5
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 5.2e-75 285.0 227 67.0
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 1.5e-74 283.5 237 64.1
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 1.5e-74 283.5 218 66.5
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 2.0e-74 283.1 234 62.8
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 7.6e-74 281.2 245 60.0
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 1.7e-73 280.0 214 66.8
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 3.2e-72 275.8 223 63.7
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 7.1e-72 274.6 238 62.6
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 6.0e-71 271.6 233 62.2
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 1.3e-70 270.4 248 58.5
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 1.3e-70 270.4 213 67.1
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 3.9e-70 268.9 209 66.5
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 6.6e-70 268.1 204 70.6
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 1.9e-69 266.5 235 59.6
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 3.3e-69 265.8 236 58.5
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 5.6e-69 265.0 214 65.4
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 2.8e-68 262.7 220 61.8
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 6.2e-68 261.5 215 62.3
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 1.1e-67 260.8 208 64.4
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 6.9e-67 258.1 211 64.5
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 9.0e-67 257.7 217 62.2
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 7.6e-66 254.6 222 58.6
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 9.9e-66 254.2 230 56.1
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 3.8e-65 252.3 211 63.0
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 1.1e-64 250.8 214 63.1
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 3.2e-64 249.2 231 58.0
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 2.1e-63 246.5 233 59.2
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 2.7e-63 246.1 223 59.2
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 2.3e-62 243.0 162 75.3
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 5.1e-62 241.9 220 57.7
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 5.3e-59 231.9 174 70.7
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 7.1e-56 221.5 218 54.1
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 2.1e-55 219.9 212 54.2
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 2.4e-51 206.5 219 50.7
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 4.0e-51 205.7 218 55.0
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 7.6e-50 201.4 206 53.9
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 2.5e-40 169.9 227 41.9
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 1.3e-38 164.1 157 59.9
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 1.1e-37 161.0 154 57.1
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 1.5e-34 150.6 117 70.1
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 4.5e-34 149.1 226 41.2
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 1.1e-27 127.9 90 73.3
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.0e-25 121.3 99 65.7
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 2.5e-24 116.7 226 35.0
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 1.8e-14 84.0 79 54.4
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 3.0e-14 83.2 209 30.6
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 3.1e-11 73.2 52 73.1
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 2.5e-08 63.5 210 25.2
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 5.5e-08 62.4 46 67.4
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 8.8e-06 55.1 59 49.2


User provided reference genes

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