Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12003 Avicennia marina HOM05D006617 ORTHO05D008247 8.3e-134 480.3 235 100.0
Migut.A00797 Erythranthe guttata HOM05D006617 ORTHO05D008247 2.0e-50 203.4 176 60.8
SGA_v2.0_scaffold146G36248 Striga asiatica HOM05D006617 ORTHO05D008247 2.2e-49 199.9 175 60.6
SalBow6G1063 Salvia bowleyana HOM05D006617 ORTHO05D008247 2.6e-42 176.4 212 49.5
CiPaw.11G138400 Carya illinoinensis HOM05D006617 ORTHO05D008247 1.3e-38 164.1 117 67.5
Haze_08904 Corylus avellana HOM05D006617 ORTHO05D008247 8.5e-38 161.4 116 65.5
Lj8A235T58 Lonicera japonica HOM05D006617 ORTHO05D008247 1.5e-37 160.6 133 57.1
Haze_08908 Corylus avellana HOM05D006617 ORTHO05D008247 2.5e-37 159.8 116 64.7
QL12p017915 Quercus lobata HOM05D006617 ORTHO05D008247 1.6e-36 157.1 111 66.7
Ah.12g057360 Amaranthus hybridus HOM05D006617 ORTHO05D008247 3.6e-36 156.0 116 64.7
CSS0023405 Camellia sinensis var. sinensis HOM05D006617 ORTHO05D008247 4.7e-36 155.6 119 60.5
MD06G1077000 Malus domestica HOM05D006617 ORTHO05D008247 1.4e-35 154.1 141 51.8
RcHm_v2.0_Chr7g0198641 Rosa chinensis HOM05D006617 ORTHO05D008247 1.8e-35 153.7 175 45.7
Nitab4.5_0010198g0030 Nicotiana tabacum HOM05D006617 ORTHO05D008247 2.3e-35 153.3 167 48.5
Nitab4.5_0029474g0010 Nicotiana tabacum HOM05D006617 ORTHO05D008247 2.3e-35 153.3 167 48.5
TAR375G0379 Trochodendron aralioides HOM05D006617 ORTHO05D008247 3.0e-35 152.9 124 62.1
Nn6g33542 Nelumbo nucifera HOM05D006617 ORTHO05D008247 4.0e-35 152.5 161 52.8
Eucgr.D01883 Eucalyptus grandis HOM05D006617 ORTHO05D008247 1.2e-34 151.0 113 61.1
Potri.014G154900 Populus trichocarpa HOM05D006617 ORTHO05D008247 1.2e-34 151.0 131 58.8
Actinidia14540 Actinidia chinensis HOM05D006617 ORTHO05D008247 1.5e-34 150.6 134 56.7
CAN.G26.17 Capsicum annuum HOM05D006617 ORTHO05D008247 2.6e-34 149.8 114 60.5
EL10Ac5g12764 Beta vulgaris HOM05D006617 ORTHO05D008247 4.4e-34 149.1 140 53.6
Prupe.5G095100 Prunus persica HOM05D006617 ORTHO05D008247 4.4e-34 149.1 113 59.3
TWI36G1290 Tripterygium wilfordii HOM05D006617 ORTHO05D008247 5.7e-34 148.7 107 62.6
GSVIVG01019803001 Vitis vinifera HOM05D006617 ORTHO05D008247 5.7e-34 148.7 108 63.9
Atru.chr6.3216 Acer truncatum HOM05D006617 ORTHO05D008247 7.5e-34 148.3 133 57.1
Glyma.05G205300 Glycine max HOM05D006617 ORTHO05D008247 1.3e-33 147.5 113 57.5
Sopen12g028920 Solanum pennellii HOM05D006617 ORTHO05D008247 1.3e-33 147.5 154 48.1
PGSC0003DMG400004251 Solanum tuberosum HOM05D006617 ORTHO05D008247 1.3e-33 147.5 151 49.0
Hma1.2p1_0514F.1_g169800 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 1.7e-33 147.1 108 63.9
Medtr8g096960 Medicago truncatula HOM05D006617 ORTHO05D008247 2.2e-33 146.7 124 54.0
AUR62017243 Chenopodium quinoa HOM05D006617 ORTHO05D008247 2.8e-33 146.4 115 60.0
FAN04G2914 Fragaria x ananassa HOM05D006617 ORTHO05D008247 2.8e-33 146.4 124 55.6
Manes.12G073000 Manihot esculenta HOM05D006617 ORTHO05D008247 2.8e-33 146.4 110 63.6
Solyc12g056350.2 Solanum lycopersicum HOM05D006617 ORTHO05D008247 2.8e-33 146.4 154 47.4
TPR.G12841 Trifolium pratense HOM05D006617 ORTHO05D008247 3.7e-33 146.0 143 53.1
FAN13G2116 Fragaria x ananassa HOM05D006617 ORTHO05D008247 6.3e-33 145.2 171 44.4
ECA233G3703 Erigeron canadensis HOM05D006617 ORTHO05D008247 8.3e-33 144.8 114 59.6
Psat7g035840 Pisum sativum HOM05D006617 ORTHO05D008247 1.1e-32 144.4 124 58.1
FAN18G0570 Fragaria x ananassa HOM05D006617 ORTHO05D008247 1.4e-32 144.1 124 54.0
Lsat_1_v5_gn_6_6941 Lactuca sativa HOM05D006617 ORTHO05D008247 1.4e-32 144.1 112 58.9
Sabra14G0117100 Salix brachista HOM05D006617 ORTHO05D008247 1.4e-32 144.1 131 57.3
THA.LOC104800995 Tarenaya hassleriana HOM05D006617 ORTHO05D008247 1.4e-32 144.1 117 57.3
DCAR_008412 Daucus carota HOM05D006617 ORTHO05D008247 1.8e-32 143.7 119 60.5
Dinv38979 Davidia involucrata HOM05D006617 ORTHO05D008247 1.8e-32 143.7 94 68.1
Phvul.002G287200 Phaseolus vulgaris HOM05D006617 ORTHO05D008247 1.8e-32 143.7 113 56.6
FvH4_5g01880 Fragaria vesca HOM05D006617 ORTHO05D008247 2.4e-32 143.3 124 54.0
FAN08G3651 Fragaria x ananassa HOM05D006617 ORTHO05D008247 2.4e-32 143.3 124 54.8
Ca_17553_v3 Cicer arietinum L. HOM05D006617 ORTHO05D008247 3.1e-32 142.9 113 55.8
Hund11496 Selenicereus undatus HOM05D006617 ORTHO05D008247 3.1e-32 142.9 114 58.8
Cpa.g.sc39.21 Carica papaya HOM05D006617 ORTHO05D008247 4.1e-32 142.5 94 68.1
Aqoxy7G00383 Aquilegia oxysepala HOM05D006617 ORTHO05D008247 5.4e-32 142.1 98 66.3
Peaxi162Scf01294g00327 Petunia axillaris HOM05D006617 ORTHO05D008247 7.0e-32 141.7 96 65.6
Sc22g0000340 Simmondsia chinensis HOM05D006617 ORTHO05D008247 1.2e-31 141.0 113 61.1
Ciclev10016122m.g Citrus clementina HOM05D006617 ORTHO05D008247 2.0e-31 140.2 128 55.5
COL.COLO4_11251 Corchorus olitorius HOM05D006617 ORTHO05D008247 2.0e-31 140.2 104 62.5
Lalb_Chr05g0224971 Lupinus albus HOM05D006617 ORTHO05D008247 2.7e-31 139.8 92 67.4
arahy.Tifrunner.gnm1.ann1.164QK4 Arachis hypogaea HOM05D006617 ORTHO05D008247 3.5e-31 139.4 113 56.6
arahy.Tifrunner.gnm1.ann1.90PEWX Arachis hypogaea HOM05D006617 ORTHO05D008247 3.5e-31 139.4 113 56.6
CsaV3_4G006040 Cucumis sativus L. HOM05D006617 ORTHO05D008247 3.5e-31 139.4 106 62.3
Glyma.08G012200 Glycine max HOM05D006617 ORTHO05D008247 3.5e-31 139.4 113 54.9
VMungo0251G0775 Vigna mungo HOM05D006617 ORTHO05D008247 3.5e-31 139.4 113 54.0
HanXRQChr12g0384501 Helianthus annuus HOM05D006617 ORTHO05D008247 7.7e-31 138.3 112 58.0
PGR031G1807 Punica granatum HOM05D006617 ORTHO05D008247 1.3e-30 137.5 152 48.0
Thecc.02G366400 Theobroma cacao HOM05D006617 ORTHO05D008247 1.3e-30 137.5 102 62.7
MELO3C016345.2 Cucumis melo HOM05D006617 ORTHO05D008247 3.8e-30 136.0 106 60.4
AL4G27880 Arabidopsis lyrata HOM05D006617 ORTHO05D008247 5.0e-30 135.6 117 54.7
PSO478G3588 Papaver somniferum HOM05D006617 ORTHO05D008247 5.0e-30 135.6 123 54.5
Cc08_g14300 Coffea canephora HOM05D006617 ORTHO05D008247 1.9e-29 133.7 90 64.4
AUR62010601 Chenopodium quinoa HOM05D000030 ORTHO05D008247 3.2e-29 132.9 100 61.0
Sed0011813 Sechium edule HOM05D006617 ORTHO05D008247 3.2e-29 132.9 113 54.0
Duzib251G0852 Durio zibethinus HOM05D006617 ORTHO05D008247 5.5e-29 132.1 113 54.0
Lj4g0017727 Lotus japonicus HOM05D006617 ORTHO05D008247 9.5e-29 131.3 117 53.0
PSO782G1088 Papaver somniferum HOM05D006617 ORTHO05D008247 1.2e-28 131.0 127 52.8
Carub.0004s1384 Capsella rubella HOM05D006617 ORTHO05D008247 2.7e-28 129.8 93 63.4
AT2G32500 Arabidopsis thaliana HOM05D006617 ORTHO05D008247 4.7e-28 129.0 109 54.1
ATR0680G238 Amborella trichopoda HOM05D006617 ORTHO05D008247 1.0e-27 127.9 101 58.4
Thhalv10017053m.g Eutrema salsugineum HOM05D006617 ORTHO05D008247 1.0e-27 127.9 92 60.9
Gohir.A12G174300 Gossypium hirsutum HOM05D006617 ORTHO05D008247 1.0e-27 127.9 116 53.4
Gohir.D12G177000 Gossypium hirsutum HOM05D006617 ORTHO05D008247 1.0e-27 127.9 116 53.4
Gorai.008G189400 Gossypium raimondii HOM05D006617 ORTHO05D008247 1.0e-27 127.9 116 53.4
BcaB01g03976 Brassica carinata HOM05D006617 ORTHO05D008247 1.8e-27 127.1 133 49.6
Aa31LG5G4800 Aethionema arabicum HOM05D006617 ORTHO05D008247 5.2e-27 125.6 92 63.0
Sp4g14850 Schrenkiella parvula HOM05D006617 ORTHO05D008247 3.4e-26 122.9 129 47.3
BraA03t11079Z Brassica rapa HOM05D006617 ORTHO05D008247 4.4e-26 122.5 133 47.4
A03p18190 Brassica napus HOM05D006617 ORTHO05D008247 7.5e-26 121.7 133 47.4
BcaC01g05904 Brassica carinata HOM05D006617 ORTHO05D008247 1.3e-25 120.9 91 60.4
Zm00001eb404120 Zea mays HOM05D006617 ORTHO05D008247 2.8e-25 119.8 125 47.2
C03p21220 Brassica napus HOM05D006617 ORTHO05D008247 4.9e-25 119.0 91 59.3
BolC3t14504H Brassica oleracea HOM05D006617 ORTHO05D008247 4.9e-25 119.0 91 59.3
SEGI_22684 Sequoiadendron giganteum HOM05D006617 ORTHO05D008247 4.5e-23 112.5 91 53.8
HPP92_004974 Vanilla planifolia HOM05D006617 ORTHO05D008247 5.9e-23 112.1 92 55.4
Os03g0110900 Oryza sativa ssp. japonica HOM05D006617 ORTHO05D008247 1.7e-22 110.5 89 55.1
Hma1.2p1_3255F.1_g334560 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 9.5e-21 104.8 94 55.3
AUR62042944 Chenopodium quinoa HOM05D006617 ORTHO05D008247 4.0e-19 99.4 115 47.0
SMO329G0076 Selaginella moellendorffii HOM05D006617 ORTHO05D008247 2.0e-18 97.1 122 42.6
Pp3c20_8200 Physcomitrium patens HOM05D006617 ORTHO05D008247 3.4e-18 96.3 93 46.2
AagrBONN_evm.TU.Sc2ySwM_228.4793 Anthoceros agrestis HOM05D006617 ORTHO05D008247 7.8e-15 85.1 88 43.2
MBI18_g01147_MAGBIO Magnolia biondii HOM05D006617 ORTHO05D008247 2.5e-13 80.1 56 62.5
Nitab4.5_0000360g0080 Nicotiana tabacum HOM05D006617 ORTHO05D008247 6.2e-12 75.5 47 63.8
Lsat_1_v5_gn_8_1081 Lactuca sativa HOM05D006617 ORTHO05D008247 5.2e-11 72.4 77 48.1
Pp3c7_1410 Physcomitrium patens HOM05D006617 ORTHO05D008247 2.0e-10 70.5 95 33.7
ClCG07G007980 Citrullus lanatus HOM05D006617 ORTHO05D008247 2.2e-09 67.0 53 52.8
Mapoly0086s0010 Marchantia polymorpha HOM05D006617 ORTHO05D008247 1.1e-08 64.7 87 33.3
Oeu025101.1 Olea europaea HOM05D006617 ORTHO05D008247 7.0e-08 62.0 36 69.4
CDE06G1437 Ceratophyllum demersum HOM05D006617 ORTHO05D008247 4.6e-07 59.3 69 44.9
Mapoly0086s0005 Marchantia polymorpha HOM05D006617 ORTHO05D008247 1.0e-06 58.2 88 30.7


User provided reference genes

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