Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.11952 Avicennia marina HOM05D006267 ORTHO05D007490 1.0e-108 396.7 198 100.0
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 4.8e-26 122.1 164 45.1
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 9.1e-25 117.9 187 39.0
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 4.2e-22 109.0 175 41.7
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 7.5e-19 98.2 180 41.1
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 6.3e-18 95.1 165 43.0
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 2.4e-17 93.2 167 36.5
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 1.3e-15 87.4 166 34.3
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 2.2e-15 86.7 169 35.5
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 2.9e-15 86.3 172 33.1
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 4.2e-14 82.4 180 32.2
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 5.5e-14 82.0 169 33.1
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 9.4e-14 81.3 168 36.3
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 1.6e-13 80.5 169 30.8
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 2.1e-13 80.1 162 33.3
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 2.7e-13 79.7 165 32.7
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 8.0e-13 78.2 170 32.9
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 4.0e-12 75.9 177 39.0
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 2.6e-11 73.2 161 37.9
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 4.4e-11 72.4 169 33.1
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 1.3e-10 70.9 166 33.7
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 1.7e-10 70.5 171 31.6
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 2.2e-10 70.1 165 32.1
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 2.2e-10 70.1 171 31.6
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 2.2e-10 70.1 166 33.7
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 3.7e-10 69.3 166 31.9
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 4.9e-10 68.9 169 29.6
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 8.3e-10 68.2 151 37.7
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 1.1e-09 67.8 172 28.5
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 1.4e-09 67.4 171 31.0
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 2.4e-09 66.6 168 31.0
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 5.4e-09 65.5 166 27.7
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 9.2e-09 64.7 177 30.5
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 9.2e-09 64.7 167 31.1
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 9.2e-09 64.7 163 30.1
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 9.2e-09 64.7 170 28.8
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 1.6e-08 63.9 171 32.7
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 3.5e-08 62.8 172 26.2
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 4.5e-08 62.4 166 29.5
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 4.5e-08 62.4 172 27.3
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 7.7e-08 61.6 160 33.8
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 1.0e-07 61.2 181 32.0
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 2.9e-07 59.7 195 34.9
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 3.8e-07 59.3 169 30.8
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 6.6e-07 58.5 182 32.4
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 1.9e-06 57.0 167 29.3
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 4.3e-06 55.8 146 32.9
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 5.6e-06 55.5 170 34.1
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 7.3e-06 55.1 169 28.4
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 9.5e-06 54.7 157 29.3
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 9.5e-06 54.7 176 28.4


User provided reference genes

Program Settings