Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 4.1e-142 508.1 259 100.0
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.3e-100 370.2 251 75.3
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 6.6e-100 367.9 251 74.9
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 3.5e-93 345.5 286 65.0
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 1.7e-92 343.2 255 67.1
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 1.9e-91 339.7 214 75.7
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 9.6e-91 337.4 241 71.0
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 9.6e-91 337.4 203 78.8
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 3.6e-90 335.5 200 78.5
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 9.0e-89 330.9 250 67.2
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 9.0e-89 330.9 213 73.2
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 9.0e-89 330.9 204 74.5
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 1.5e-88 330.1 201 76.1
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 1.5e-88 330.1 254 65.7
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 1.5e-88 330.1 206 74.3
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 3.4e-88 328.9 200 76.0
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 3.4e-88 328.9 218 70.6
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 5.8e-88 328.2 197 78.2
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 2.9e-87 325.9 229 69.4
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.9e-87 325.9 198 77.8
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 3.8e-87 325.5 198 76.8
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 4.9e-87 325.1 246 64.2
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 4.9e-87 325.1 215 71.2
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 4.9e-87 325.1 228 68.0
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 4.9e-87 325.1 251 66.1
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 6.4e-87 324.7 228 69.7
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 1.1e-86 323.9 252 66.7
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 1.9e-86 323.2 218 69.7
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 1.9e-86 323.2 328 57.0
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 3.2e-86 322.4 230 66.5
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 5.4e-86 321.6 247 64.8
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 5.4e-86 321.6 225 69.3
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 5.4e-86 321.6 228 68.4
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 7.1e-86 321.2 239 64.4
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 7.1e-86 321.2 196 75.0
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 9.3e-86 320.9 228 68.4
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 2.1e-85 319.7 254 61.4
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 2.1e-85 319.7 228 68.0
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 2.1e-85 319.7 207 71.5
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 2.1e-85 319.7 231 67.1
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 2.7e-85 319.3 248 62.9
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 2.7e-85 319.3 234 66.2
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 3.5e-85 318.9 200 75.0
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.0e-84 317.4 228 67.5
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 3.0e-84 315.8 227 66.5
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 4.3e-83 312.0 228 64.5
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 1.6e-82 310.1 209 71.3
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 2.8e-82 309.3 207 72.0
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 4.8e-82 308.5 232 65.5
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 4.8e-82 308.5 212 70.3
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 6.2e-82 308.1 234 63.7
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 1.8e-81 306.6 244 62.3
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 4.0e-81 305.4 209 66.5
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 2.0e-80 303.1 201 69.2
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 2.6e-80 302.8 229 64.6
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 3.4e-80 302.4 202 70.8
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 9.9e-80 300.8 204 66.7
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 1.3e-79 300.4 200 70.0
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 1.3e-79 300.4 212 64.6
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 1.7e-79 300.1 213 64.3
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 2.2e-79 299.7 212 65.1
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 3.8e-79 298.9 201 68.2
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 3.8e-79 298.9 201 69.7
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 4.9e-79 298.5 201 67.2
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 6.4e-79 298.1 225 64.4
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 6.4e-79 298.1 179 77.7
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 1.9e-78 296.6 213 62.9
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 1.9e-78 296.6 213 63.4
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 1.9e-78 296.6 213 63.4
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 3.2e-78 295.8 243 61.3
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 3.2e-78 295.8 225 62.2
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 5.4e-78 295.0 268 57.1
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 7.1e-78 294.7 246 61.4
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 2.7e-77 292.7 213 67.1
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 7.9e-77 291.2 213 62.4
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 1.0e-76 290.8 212 65.6
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.0e-76 290.8 221 62.0
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 1.8e-76 290.0 213 62.4
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 1.8e-76 290.0 243 60.1
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 2.3e-76 289.7 230 60.4
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 3.9e-76 288.9 218 62.8
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 1.1e-75 287.3 206 64.6
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 2.5e-75 286.2 220 61.8
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 2.5e-75 286.2 219 61.6
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 7.4e-75 284.6 225 61.3
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 6.2e-74 281.6 223 63.7
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 8.1e-74 281.2 180 73.9
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.8e-73 280.0 248 60.1
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 1.2e-72 277.3 245 57.6
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 1.5e-72 276.9 220 60.5
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 1.3e-71 273.9 222 59.9
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 2.7e-69 266.2 213 59.2
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 1.3e-68 263.8 242 56.2
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 3.9e-68 262.3 249 57.8
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 4.3e-67 258.8 180 68.3
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 7.4e-67 258.1 215 58.6
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 3.1e-65 252.7 249 56.2
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 2.2e-63 246.5 156 74.4
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.1e-57 227.6 149 70.5
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 4.1e-57 225.7 201 51.7
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 3.4e-56 222.6 159 65.4
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 6.3e-50 201.8 181 58.6
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 1.1e-49 201.1 135 69.6
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.2e-48 197.6 110 80.9
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.3e-47 194.1 185 53.5
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 2.7e-45 186.4 111 74.8
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.7e-42 177.2 112 75.0
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 3.1e-41 172.9 140 66.4
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 5.2e-36 155.6 87 81.6
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 1.1e-35 154.5 106 70.8
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 5.9e-32 142.1 90 75.6
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 9.4e-30 134.8 141 53.9
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 5.2e-28 129.0 91 65.9
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 3.4e-27 126.3 84 67.9
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 9.1e-25 118.2 87 66.7
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 2.0e-24 117.1 70 75.7
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 2.0e-24 117.1 86 67.4
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 8.5e-23 111.7 155 43.9
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 1.5e-22 110.9 110 54.5
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 4.2e-22 109.4 79 60.8
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 1.2e-19 101.3 65 72.3
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 1.8e-17 94.0 67 67.2
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 7.7e-16 88.6 68 63.2
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 2.6e-11 73.6 51 70.6


User provided reference genes

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