Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.11825 Avicennia marina HOM05D006099 ORTHO05D007317 9.0e-78 293.5 147 100.0
Migut.A00463 Erythranthe guttata HOM05D006099 ORTHO05D007317 2.6e-37 159.1 125 70.4
SalBow4G2099 Salvia bowleyana HOM05D006099 ORTHO05D007317 8.0e-34 147.5 112 65.2
Hund03250 Selenicereus undatus HOM05D006099 ORTHO05D007317 2.0e-29 132.9 102 61.8
SGA_v2.0_scaffold27G11694 Striga asiatica HOM05D006099 ORTHO05D007317 5.9e-29 131.3 107 62.6
CSS0007227 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 6.5e-28 127.9 108 59.3
Lj7A751T33 Lonicera japonica HOM05D006099 ORTHO05D007317 3.2e-27 125.6 119 54.6
GSVIVG01035588001 Vitis vinifera HOM05D006099 ORTHO05D007317 4.2e-27 125.2 122 52.5
Lsat_1_v5_gn_3_111601 Lactuca sativa HOM05D006099 ORTHO05D007317 9.4e-27 124.0 114 51.8
vmacro05090 Vaccinium macrocarpon HOM05D006099 ORTHO05D007317 2.7e-26 122.5 122 54.1
CSS0009505 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 6.1e-26 121.3 107 57.9
Nitab4.5_0001159g0110 Nicotiana tabacum HOM05D006099 ORTHO05D007317 6.1e-26 121.3 128 53.9
unitig_32.g10950 Utricularia gibba HOM05D006099 ORTHO05D007317 6.1e-26 121.3 98 65.3
DCAR_000694 Daucus carota HOM05D006099 ORTHO05D007317 1.0e-25 120.6 110 53.6
Actinidia03572 Actinidia chinensis HOM05D006099 ORTHO05D007317 2.3e-25 119.4 107 57.9
Cc00_g12770 Coffea canephora HOM05D006099 ORTHO05D007317 2.3e-25 119.4 123 52.8
Dinv37480 Davidia involucrata HOM05D006099 ORTHO05D007317 2.3e-25 119.4 122 51.6
ECA240G1547 Erigeron canadensis HOM05D006099 ORTHO05D007317 2.3e-25 119.4 101 59.4
Sopen12g032140 Solanum pennellii HOM05D006099 ORTHO05D007317 2.3e-25 119.4 105 59.0
Rhsim07G0173500 Rhododendron simsii HOM05D006099 ORTHO05D007317 8.8e-25 117.5 110 56.4
Lalb_Chr24g0402361 Lupinus albus HOM05D006099 ORTHO05D007317 1.2e-24 117.1 108 55.6
Ciclev10009104m.g Citrus clementina HOM05D006099 ORTHO05D007317 1.5e-24 116.7 122 48.4
Nn4g25135 Nelumbo nucifera HOM05D006099 ORTHO05D007317 5.7e-24 114.8 103 55.3
Haze_21663 Corylus avellana HOM05D006099 ORTHO05D007317 7.5e-24 114.4 111 54.1
CAN.G947.18 Capsicum annuum HOM05D006099 ORTHO05D007317 9.8e-24 114.0 100 60.0
HanXRQChr13g0419861 Helianthus annuus HOM05D006099 ORTHO05D007317 9.8e-24 114.0 101 58.4
Psat6g031520 Pisum sativum HOM05D006099 ORTHO05D007317 9.8e-24 114.0 108 53.7
Solyc12g096280.2 Solanum lycopersicum HOM05D006099 ORTHO05D007317 9.8e-24 114.0 100 59.0
Cfa013234 Carpinus fangiana HOM05D006099 ORTHO05D007317 1.7e-23 113.2 100 56.0
Atru.chr7.2710 Acer truncatum HOM05D006099 ORTHO05D007317 2.8e-23 112.5 100 53.0
Manes.15G141200 Manihot esculenta HOM05D006099 ORTHO05D007317 2.8e-23 112.5 101 54.5
TPR.G26527 Trifolium pratense HOM05D006099 ORTHO05D007317 2.8e-23 112.5 112 51.8
Lj5g0025000 Lotus japonicus HOM05D006099 ORTHO05D007317 3.7e-23 112.1 109 53.2
Manes.15G141100 Manihot esculenta HOM05D006099 ORTHO05D007317 3.7e-23 112.1 104 59.6
Phvul.001G057000 Phaseolus vulgaris HOM05D006099 ORTHO05D007317 3.7e-23 112.1 122 50.8
CANSAT25G1623 Cannabis sativa HOM05D006099 ORTHO05D007317 4.8e-23 111.7 100 53.0
Ca_27927_v3 Cicer arietinum L. HOM05D006099 ORTHO05D007317 1.1e-22 110.5 117 53.0
Oeu035175.2 Olea europaea HOM05D006099 ORTHO05D007317 1.1e-22 110.5 86 67.4
Prupe.1G463600 Prunus persica HOM05D006099 ORTHO05D007317 1.1e-22 110.5 124 48.4
Hma1.2p1_1615F.1_g293710 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 1.4e-22 110.2 97 57.7
arahy.Tifrunner.gnm1.ann1.ZJIP4K Arachis hypogaea HOM05D006099 ORTHO05D007317 1.8e-22 109.8 126 45.2
FAN27G0146 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.8e-22 109.8 127 48.0
Medtr1g010130 Medicago truncatula HOM05D006099 ORTHO05D007317 1.8e-22 109.8 117 49.6
arahy.Tifrunner.gnm1.ann1.AEW87R Arachis hypogaea HOM05D006099 ORTHO05D007317 2.4e-22 109.4 100 53.0
PGSC0003DMG400029284 Solanum tuberosum HOM05D006099 ORTHO05D007317 2.4e-22 109.4 97 59.8
TAR626G0599 Trochodendron aralioides HOM05D006099 ORTHO05D007317 2.4e-22 109.4 103 53.4
VMungo0647G0711 Vigna mungo HOM05D006099 ORTHO05D007317 2.4e-22 109.4 120 48.3
FAN15G2948 Fragaria x ananassa HOM05D006099 ORTHO05D007317 3.1e-22 109.0 123 47.2
Os06g0663600 Oryza sativa ssp. japonica HOM05D006099 ORTHO05D007317 4.1e-22 108.6 122 49.2
FvH4_2g30570 Fragaria vesca HOM05D006099 ORTHO05D007317 5.4e-22 108.2 126 47.6
Cpa.g.sc148.13 Carica papaya HOM05D006099 ORTHO05D007317 7.0e-22 107.8 97 53.6
CiPaw.07G216100 Carya illinoinensis HOM05D006099 ORTHO05D007317 7.0e-22 107.8 93 57.0
AUR62028064 Chenopodium quinoa HOM05D006099 ORTHO05D007317 7.0e-22 107.8 108 49.1
BcaC04g20481 Brassica carinata HOM05D006099 ORTHO05D007317 1.6e-21 106.7 121 46.3
C09p43040 Brassica napus HOM05D006099 ORTHO05D007317 2.0e-21 106.3 108 50.0
BolC6t36631H Brassica oleracea HOM05D006099 ORTHO05D007317 2.0e-21 106.3 108 50.0
Glyma.14G131200 Glycine max HOM05D006099 ORTHO05D007317 2.0e-21 106.3 116 49.1
BcaC08g44050 Brassica carinata HOM05D006099 ORTHO05D007317 3.5e-21 105.5 108 50.0
PGR142G3206 Punica granatum HOM05D006099 ORTHO05D007317 3.5e-21 105.5 113 47.8
Sc23g0004430 Simmondsia chinensis HOM05D006099 ORTHO05D007317 3.5e-21 105.5 119 46.2
AT4G31150 Arabidopsis thaliana HOM05D006099 ORTHO05D007317 4.5e-21 105.1 111 50.5
AUR62020668 Chenopodium quinoa HOM05D006099 ORTHO05D007317 4.5e-21 105.1 129 45.0
SHI15001 Sapria himalayana HOM05D006099 ORTHO05D007317 4.5e-21 105.1 101 52.5
A08p18780 Brassica napus HOM05D006099 ORTHO05D007317 5.9e-21 104.8 108 50.9
BraA08t33839Z Brassica rapa HOM05D006099 ORTHO05D007317 5.9e-21 104.8 108 50.9
Gohir.A05G066400 Gossypium hirsutum HOM05D006099 ORTHO05D007317 5.9e-21 104.8 109 52.3
AL7G20920 Arabidopsis lyrata HOM05D006099 ORTHO05D007317 7.7e-21 104.4 111 48.6
BolC3t21124H Brassica oleracea HOM05D006099 ORTHO05D007317 7.7e-21 104.4 108 50.9
BcaB03g12683 Brassica carinata HOM05D006099 ORTHO05D007317 2.9e-20 102.4 108 50.0
Gohir.D05G068900 Gossypium hirsutum HOM05D006099 ORTHO05D007317 2.9e-20 102.4 109 51.4
Gorai.009G069800 Gossypium raimondii HOM05D006099 ORTHO05D007317 2.9e-20 102.4 109 51.4
C03p88160 Brassica napus HOM05D006099 ORTHO05D007317 5.0e-20 101.7 103 50.5
RcHm_v2.0_Chr6g0312441 Rosa chinensis HOM05D006099 ORTHO05D007317 5.0e-20 101.7 103 49.5
Thhalv10025966m.g Eutrema salsugineum HOM05D006099 ORTHO05D007317 8.6e-20 100.9 111 49.5
MBI16_g00820_MAGBIO Magnolia biondii HOM05D006099 ORTHO05D007317 8.6e-20 100.9 138 39.9
Carub.0007s0938 Capsella rubella HOM05D006099 ORTHO05D007317 1.5e-19 100.1 112 47.3
MD08G1132300 Malus domestica HOM05D006099 ORTHO05D007317 1.9e-19 99.8 113 44.2
Pp3c6_10670 Physcomitrium patens HOM05D006099 ORTHO05D007317 1.9e-19 99.8 111 49.5
Hma1.2p1_1615F.1_g293700 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 2.5e-19 99.4 107 47.7
Mapoly0013s0098 Marchantia polymorpha HOM05D006099 ORTHO05D007317 2.5e-19 99.4 144 43.1
Zm00001eb274520 Zea mays HOM05D006099 ORTHO05D007317 3.3e-19 99.0 119 47.1
Zm00001eb274410 Zea mays HOM05D006099 ORTHO05D007317 4.2e-19 98.6 101 53.5
Zm00001eb274500 Zea mays HOM05D006099 ORTHO05D007317 5.5e-19 98.2 101 53.5
Sc23g0004790 Simmondsia chinensis HOM05D006099 ORTHO05D007317 2.1e-18 96.3 105 47.6
TWI32G0633 Tripterygium wilfordii HOM05D006099 ORTHO05D007317 3.6e-18 95.5 104 50.0
Aa31LG2G19160 Aethionema arabicum HOM05D006099 ORTHO05D007317 4.7e-18 95.1 108 47.2
C03p41630 Brassica napus HOM05D006099 ORTHO05D007317 4.7e-18 95.1 96 51.0
THA.LOC104803891 Tarenaya hassleriana HOM05D006099 ORTHO05D007317 4.7e-18 95.1 108 45.4
Sp7g29030 Schrenkiella parvula HOM05D006099 ORTHO05D007317 6.1e-18 94.7 108 44.4
Sed0006978 Sechium edule HOM05D006099 ORTHO05D007317 6.1e-18 94.7 119 45.4
ATR0626G128 Amborella trichopoda HOM05D006099 ORTHO05D007317 1.4e-17 93.6 100 41.0
CsaV3_2G031500 Cucumis sativus L. HOM05D006099 ORTHO05D007317 2.3e-17 92.8 119 44.5
Peaxi162Scf00876g00025 Petunia axillaris HOM05D006099 ORTHO05D007317 2.3e-17 92.8 106 48.1
Potri.018G001000 Populus trichocarpa HOM05D006099 ORTHO05D007317 5.2e-17 91.7 123 46.3
MELO3C011207.2 Cucumis melo HOM05D006099 ORTHO05D007317 6.8e-17 91.3 119 44.5
SMO351G0465 Selaginella moellendorffii HOM05D006099 ORTHO05D007317 6.8e-17 91.3 100 48.0
PSO170G3285 Papaver somniferum HOM05D006099 ORTHO05D007317 1.5e-16 90.1 129 43.4
Zm00001eb274550 Zea mays HOM05D006099 ORTHO05D007317 3.4e-16 89.0 93 53.8
AagrBONN_evm.TU.Sc2ySwM_228.1579 Anthoceros agrestis HOM05D006099 ORTHO05D007317 4.4e-16 88.6 100 48.0
Duzib168G0660 Durio zibethinus HOM05D006099 ORTHO05D007317 7.5e-16 87.8 102 49.0
ClCG08G012820 Citrullus lanatus HOM05D006099 ORTHO05D007317 9.8e-16 87.4 126 40.5
Thecc.09G001300 Theobroma cacao HOM05D006099 ORTHO05D007317 9.8e-16 87.4 94 50.0
EL10Ac2g03669 Beta vulgaris HOM05D006099 ORTHO05D007317 1.8e-14 83.2 87 48.3
QL12p030693 Quercus lobata HOM05D006099 ORTHO05D007317 5.4e-14 81.6 126 38.1
QL12p030880 Quercus lobata HOM05D006099 ORTHO05D007317 9.2e-14 80.9 126 38.1
HPP92_011639 Vanilla planifolia HOM05D006099 ORTHO05D007317 9.2e-14 80.9 98 41.8
Sabra18G0005300 Salix brachista HOM05D002037 ORTHO05D002762 4.5e-13 78.6 112 44.6
FAN20G1258 Fragaria x ananassa HOM05D006099 ORTHO05D007317 5.9e-13 78.2 126 40.5
FAN20G1767 Fragaria x ananassa HOM05D006099 ORTHO05D007317 5.9e-13 78.2 126 40.5
Zm00001eb442290 Zea mays HOM05D006099 ORTHO05D007317 1.0e-12 77.4 56 62.5
CDE08G0278 Ceratophyllum demersum HOM05D006099 ORTHO05D007317 1.6e-10 70.1 82 46.3
CBR_g34340 Chara braunii HOM05D006099 ORTHO05D007317 2.8e-10 69.3 79 49.4
Eucgr.C02144 Eucalyptus grandis HOM05D006099 ORTHO05D007317 1.8e-09 66.6 106 40.6
FAN24G0140 Fragaria x ananassa HOM05D006099 ORTHO05D007317 5.4e-06 55.1 39 64.1
RcHm_v2.0_Chr6g0312501 Rosa chinensis HOM05D006099 ORTHO05D007317 5.4e-06 55.1 39 64.1


User provided reference genes

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