Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 1.4e-78 296.2 150 100.0
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 6.8e-65 250.8 150 83.3
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 4.1e-62 241.5 150 81.3
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 1.2e-56 223.4 149 72.5
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 5.8e-56 221.1 146 74.0
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 5.8e-56 221.1 149 71.1
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 3.8e-55 218.4 149 70.5
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 4.9e-55 218.0 147 70.7
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 8.4e-55 217.2 150 69.3
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 1.1e-54 216.9 149 71.8
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 2.4e-54 215.7 144 69.4
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 1.2e-53 213.4 150 68.0
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 1.2e-53 213.4 150 68.7
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 1.2e-53 213.4 149 69.1
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 6.0e-53 211.1 151 67.5
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 1.9e-51 206.1 149 67.1
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 4.3e-51 204.9 148 65.5
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 4.3e-51 204.9 149 66.4
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 7.3e-51 204.1 143 67.1
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 1.2e-50 203.4 151 66.2
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 2.8e-50 202.2 144 64.6
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 3.6e-50 201.8 145 66.9
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 8.1e-50 200.7 148 66.2
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 1.1e-49 200.3 150 63.3
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 5.2e-49 198.0 149 65.8
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 5.2e-49 198.0 149 63.8
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 6.9e-49 197.6 147 63.9
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 6.9e-49 197.6 149 65.8
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 6.9e-49 197.6 146 65.1
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 1.2e-48 196.8 146 64.4
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 1.5e-48 196.4 146 65.1
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 2.6e-48 195.7 150 62.0
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 2.6e-48 195.7 150 62.7
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 7.6e-48 194.1 149 63.8
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.3e-47 193.4 144 66.0
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 2.9e-47 192.2 150 61.3
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 4.9e-47 191.4 146 62.3
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 6.4e-47 191.0 150 62.0
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 1.1e-46 190.3 159 60.4
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 5.4e-46 188.0 142 63.4
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 5.4e-46 188.0 149 62.4
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 5.4e-46 188.0 149 62.4
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 5.4e-46 188.0 149 62.4
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 7.1e-46 187.6 147 60.5
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 7.1e-46 187.6 149 62.4
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 1.2e-45 186.8 148 58.8
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 1.2e-45 186.8 123 71.5
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 2.1e-45 186.0 150 60.7
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 2.7e-45 185.7 149 57.7
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 6.0e-45 184.5 150 59.3
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 7.8e-45 184.1 145 60.0
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 1.0e-44 183.7 151 55.6
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 1.3e-44 183.3 127 67.7
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 2.3e-44 182.6 172 54.7
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 2.3e-44 182.6 151 57.6
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 3.0e-44 182.2 151 61.6
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 3.9e-44 181.8 146 58.9
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 3.9e-44 181.8 150 58.7
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 3.9e-44 181.8 150 60.0
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 8.7e-44 180.6 172 55.8
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 1.1e-43 180.3 149 61.1
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 1.5e-43 179.9 123 66.7
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 1.9e-43 179.5 149 59.7
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 3.3e-43 178.7 149 59.7
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 3.3e-43 178.7 148 59.5
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 4.3e-43 178.3 150 60.0
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 4.3e-43 178.3 144 60.4
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 1.3e-42 176.8 147 57.8
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 1.3e-42 176.8 123 66.7
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 2.8e-42 175.6 149 59.7
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 2.8e-42 175.6 148 59.5
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 3.6e-42 175.3 149 59.1
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 6.2e-42 174.5 150 56.7
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 6.2e-42 174.5 126 62.7
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 1.1e-41 173.7 168 51.8
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 1.4e-41 173.3 148 55.4
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 1.4e-41 173.3 123 67.5
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 1.8e-41 172.9 146 58.2
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 3.1e-41 172.2 147 59.9
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 3.1e-41 172.2 147 59.9
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 3.1e-41 172.2 174 52.9
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 9.0e-41 170.6 111 73.0
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 2.6e-40 169.1 119 65.5
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 3.8e-39 165.2 150 52.0
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 3.2e-38 162.2 124 58.9
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 5.4e-38 161.4 147 50.3
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 3.5e-37 158.7 125 59.2
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 6.7e-36 154.5 150 52.0
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 5.6e-35 151.4 130 56.9
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 7.4e-35 151.0 115 65.2
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 4.8e-34 148.3 124 60.5
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 8.1e-34 147.5 115 59.1
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 5.3e-33 144.8 112 58.9
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 4.5e-32 141.7 110 61.8
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 4.5e-32 141.7 111 60.4
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 5.8e-32 141.4 151 50.3
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 3.5e-29 132.1 111 59.5
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 2.3e-28 129.4 142 49.3
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 7.4e-27 124.4 146 42.5
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 2.8e-26 122.5 144 43.1
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 6.2e-26 121.3 127 48.0
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 1.8e-25 119.8 81 72.8
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 2.2e-23 112.8 87 62.1
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 1.4e-22 110.2 142 41.5
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 2.5e-22 109.4 87 60.9
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 3.2e-22 109.0 117 45.3
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 2.1e-21 106.3 80 65.0
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 3.9e-20 102.1 71 67.6
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 5.1e-20 101.7 71 63.4
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 1.5e-19 100.1 70 62.9
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.4e-17 93.6 69 60.9
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 4.1e-17 92.0 70 64.3
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 9.3e-14 80.9 96 43.8
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 1.5e-11 73.6 44 81.8
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 7.4e-11 71.2 65 53.8
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 3.4e-08 62.4 60 51.7


User provided reference genes

Program Settings