Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.11749 Avicennia marina HOM05D003875 ORTHO05D004240 1.8e-75 285.8 145 100.0
Oeu030072.1 Olea europaea HOM05D003875 ORTHO05D004240 9.6e-40 167.2 140 57.9
Cc11_g01490 Coffea canephora HOM05D003875 ORTHO05D004240 2.7e-34 149.1 140 54.3
Cfa013196 Carpinus fangiana HOM05D003491 ORTHO05D004293 5.1e-33 144.8 139 52.5
Ca_12920_v3 Cicer arietinum L. HOM05D003875 ORTHO05D004240 3.3e-32 142.1 133 52.6
Ciclev10008314m.g Citrus clementina HOM05D003875 ORTHO05D004240 7.4e-32 141.0 129 55.0
Sabra18G0033500 Salix brachista HOM05D003875 ORTHO05D004240 7.4e-32 141.0 137 51.8
CiPaw.08G014300 Carya illinoinensis HOM05D003875 ORTHO05D004240 9.6e-32 140.6 139 50.4
Haze_21599 Corylus avellana HOM05D003875 ORTHO05D004240 1.3e-31 140.2 139 51.1
Aqoxy7G01948 Aquilegia oxysepala HOM05D003875 ORTHO05D004240 1.6e-31 139.8 145 51.0
arahy.Tifrunner.gnm1.ann1.R0TJM1 Arachis hypogaea HOM05D003875 ORTHO05D004240 1.6e-31 139.8 136 52.2
Atru.chr7.2231 Acer truncatum HOM05D003875 ORTHO05D004240 6.2e-31 137.9 127 56.7
Atru.chr7.2352 Acer truncatum HOM05D003875 ORTHO05D004240 6.2e-31 137.9 127 56.7
arahy.Tifrunner.gnm1.ann1.3Z1QL9 Arachis hypogaea HOM05D003875 ORTHO05D004240 1.1e-30 137.1 136 51.5
Migut.A00291 Erythranthe guttata HOM05D003875 ORTHO05D004240 1.8e-30 136.3 145 54.5
Lalb_Chr04g0257471 Lupinus albus HOM05D003875 ORTHO05D004240 2.4e-30 136.0 136 50.7
QL12p024553 Quercus lobata HOM05D003875 ORTHO05D004240 2.4e-30 136.0 136 50.0
Potri.018G032700 Populus trichocarpa HOM05D003875 ORTHO05D004240 6.9e-30 134.4 136 49.3
Duzib168G0377 Durio zibethinus HOM05D003875 ORTHO05D004240 9.0e-30 134.0 139 47.5
CANSAT64G0144 Cannabis sativa HOM05D003875 ORTHO05D004240 1.2e-29 133.7 129 50.4
Sc23g0006970 Simmondsia chinensis HOM05D003875 ORTHO05D004240 1.2e-29 133.7 140 49.3
Actinidia13268 Actinidia chinensis HOM05D003875 ORTHO05D004240 2.0e-29 132.9 140 52.1
TWI34G0133 Tripterygium wilfordii HOM05D003875 ORTHO05D004240 4.5e-29 131.7 126 54.8
Dinv11597 Davidia involucrata HOM05D003875 ORTHO05D004240 1.3e-28 130.2 131 52.7
Thecc.09G147200 Theobroma cacao HOM05D003875 ORTHO05D004240 1.7e-28 129.8 139 46.8
Atru.chr7.2348 Acer truncatum HOM05D003875 ORTHO05D004240 2.2e-28 129.4 127 51.2
Phvul.001G054300 Phaseolus vulgaris HOM05D003875 ORTHO05D004240 3.8e-28 128.6 123 51.2
FvH4_2g29810 Fragaria vesca HOM05D003875 ORTHO05D004240 4.9e-28 128.3 139 48.2
Prupe.1G471500 Prunus persica HOM05D003875 ORTHO05D004240 6.4e-28 127.9 139 48.2
Medtr1g011660 Medicago truncatula HOM05D003875 ORTHO05D004240 8.4e-28 127.5 128 49.2
Rhsim02G0189500 Rhododendron simsii HOM05D003875 ORTHO05D004240 8.4e-28 127.5 133 51.1
GSVIVG01035782001 Vitis vinifera HOM05D003875 ORTHO05D004240 1.1e-27 127.1 138 47.8
Psat6g030240 Pisum sativum HOM05D003875 ORTHO05D004240 1.4e-27 126.7 125 49.6
VMungo0647G0068 Vigna mungo HOM05D003875 ORTHO05D004240 4.2e-27 125.2 124 50.8
MBI01_g15494_MAGBIO Magnolia biondii HOM05D003875 ORTHO05D004240 2.7e-26 122.5 145 44.8
Lj4g0004496 Lotus japonicus HOM05D003875 ORTHO05D004240 4.6e-26 121.7 134 46.3
Glyma.17G206400 Glycine max HOM05D003875 ORTHO05D004240 1.0e-25 120.6 135 45.9
MD08G1141600 Malus domestica HOM05D003875 ORTHO05D004240 2.3e-25 119.4 139 46.8
COL.COLO4_24012 Corchorus olitorius HOM05D003875 ORTHO05D004240 3.0e-25 119.0 133 45.1
Manes.03G018500 Manihot esculenta HOM05D003875 ORTHO05D004240 6.7e-25 117.9 131 43.5
TPR.G15662 Trifolium pratense HOM05D003875 ORTHO05D004240 6.7e-25 117.9 128 46.9
PGR044G0870 Punica granatum HOM05D003875 ORTHO05D004240 1.1e-24 117.1 123 51.2
RcHm_v2.0_Chr6g0298841 Rosa chinensis HOM05D003875 ORTHO05D004240 9.6e-24 114.0 140 45.0
RhsimUnG0038500 Rhododendron simsii HOM05D003875 ORTHO05D004240 1.3e-23 113.6 130 47.7
PSO170G4839 Papaver somniferum HOM05D003875 ORTHO05D004240 2.0e-21 106.3 128 46.9
EL10Ac2g02560 Beta vulgaris HOM05D003875 ORTHO05D004240 7.6e-21 104.4 142 38.7
CARHR240470 Cardamine hirsuta HOM05D003875 ORTHO05D004240 7.6e-21 104.4 126 46.0
BcaC09g52043 Brassica carinata HOM05D003875 ORTHO05D004240 2.9e-20 102.4 126 45.2
Migut.A00295 Erythranthe guttata HOM05D003875 ORTHO05D004240 1.4e-19 100.1 107 54.2
Sp7g30310 Schrenkiella parvula HOM05D003875 ORTHO05D004240 1.9e-19 99.8 118 44.9
BolC1t00642H Brassica oleracea HOM05D003875 ORTHO05D004240 3.2e-19 99.0 126 44.4
AUR62032357 Chenopodium quinoa HOM05D003875 ORTHO05D004240 3.2e-19 99.0 139 38.1
Atru.chr7.2228 Acer truncatum HOM05D003875 ORTHO05D004240 5.5e-19 98.2 98 49.0
Ah.12g063710 Amaranthus hybridus HOM05D003875 ORTHO05D004240 5.5e-19 98.2 144 37.5
C01p06480 Brassica napus HOM05D003875 ORTHO05D004240 9.3e-19 97.4 126 41.3
AUR62041852 Chenopodium quinoa HOM05D003875 ORTHO05D004240 9.3e-19 97.4 140 38.6
Thhalv10025128m.g Eutrema salsugineum HOM05D003875 ORTHO05D004240 1.6e-18 96.7 127 44.9
AT4G29250 Arabidopsis thaliana HOM05D003875 ORTHO05D004240 2.7e-18 95.9 128 42.2
A01p05860 Brassica napus HOM05D003875 ORTHO05D004240 3.5e-18 95.5 111 46.8
Aa31sc251G50 Aethionema arabicum HOM05D003875 ORTHO05D004240 1.8e-17 93.2 135 39.3
Eucgr.C02832 Eucalyptus grandis HOM05D003875 ORTHO05D004240 5.1e-17 91.7 134 43.3
Rhsim02G0191700 Rhododendron simsii HOM05D003875 ORTHO05D004240 6.7e-17 91.3 126 43.7
Carub.0007s1135 Capsella rubella HOM05D003875 ORTHO05D004240 2.5e-16 89.4 126 40.5
FAN27G0381 Fragaria x ananassa HOM05D003875 ORTHO05D004240 4.3e-16 88.6 90 51.1
ATR0083G032 Amborella trichopoda HOM05D003875 ORTHO05D004240 1.3e-15 87.0 117 41.9
Aqoxy2G03460 Aquilegia oxysepala HOM05D003875 ORTHO05D004240 1.6e-15 86.7 143 37.8
AL7G23210 Arabidopsis lyrata HOM05D003875 ORTHO05D004240 8.2e-15 84.3 128 37.5
Cpa.g.sc55.105 Carica papaya HOM05D003875 ORTHO05D004240 8.2e-15 84.3 129 41.9
SEGI_28149 Sequoiadendron giganteum HOM05D003875 ORTHO05D004240 3.1e-14 82.4 124 39.5
ATR0665G289 Amborella trichopoda HOM05D003875 ORTHO05D004240 5.3e-14 81.6 130 36.2
RhsimUnG0218800 Rhododendron simsii HOM05D003875 ORTHO05D004240 6.9e-14 81.3 94 48.9
THA.LOC104803631 Tarenaya hassleriana HOM05D003875 ORTHO05D004240 9.0e-14 80.9 132 37.9
MBI11_g42452_MAGBIO Magnolia biondii HOM05D003875 ORTHO05D004240 2.0e-13 79.7 124 37.9
Cpa.g.sc117.81 Carica papaya HOM05D003875 ORTHO05D004240 3.4e-13 79.0 145 32.4
Nn1g02442 Nelumbo nucifera HOM05D003875 ORTHO05D004240 4.5e-13 78.6 135 36.3
AUR62001021 Chenopodium quinoa HOM05D003875 ORTHO05D004240 6.5e-12 74.7 154 31.2
Ah.06g192290 Amaranthus hybridus HOM05D003875 ORTHO05D004240 5.5e-11 71.6 151 30.5
PGR083G0707 Punica granatum HOM05D003875 ORTHO05D004240 5.5e-11 71.6 120 32.5
AUR62004931 Chenopodium quinoa HOM05D003875 ORTHO05D004240 7.2e-11 71.2 142 31.7
Potri.013G039700 Populus trichocarpa HOM05D003875 ORTHO05D004240 7.2e-11 71.2 144 31.2
Thecc.05G286300 Theobroma cacao HOM05D003875 ORTHO05D004240 7.2e-11 71.2 138 31.9
Zm00001eb057000 Zea mays HOM05D003875 ORTHO05D004240 7.2e-11 71.2 128 33.6
FAN05G4998 Fragaria x ananassa HOM05D003875 ORTHO05D004240 1.2e-10 70.5 148 29.1
FAN05G1610 Fragaria x ananassa HOM05D003875 ORTHO05D004240 1.6e-10 70.1 148 29.1
Rhsim02G0190700 Rhododendron simsii HOM05D003875 ORTHO05D004240 2.7e-10 69.3 82 43.9
HanXRQChr05g0149281 Helianthus annuus HOM05D003875 ORTHO05D004240 4.6e-10 68.6 157 27.4
TAR365G0262 Trochodendron aralioides HOM05D003875 ORTHO05D004240 4.6e-10 68.6 142 31.0
FvH4_6g03120 Fragaria vesca HOM05D003875 ORTHO05D004240 7.9e-10 67.8 140 30.7
FAN24G0947 Fragaria x ananassa HOM05D003875 ORTHO05D004240 7.9e-10 67.8 71 47.9
EL10Ac4g09121 Beta vulgaris HOM05D003875 ORTHO05D004240 1.4e-09 67.0 155 29.7
CANSAT54G0990 Cannabis sativa HOM05D003875 ORTHO05D004240 1.4e-09 67.0 134 32.1
FvH4_6g03080 Fragaria vesca HOM05D003875 ORTHO05D004240 1.4e-09 67.0 142 30.3
FAN09G4140 Fragaria x ananassa HOM05D003875 ORTHO05D004240 1.4e-09 67.0 148 29.1
Lj6P272T7 Lonicera japonica HOM05D003875 ORTHO05D004240 1.4e-09 67.0 126 32.5
Rhsim05G0161300 Rhododendron simsii HOM05D003875 ORTHO05D004240 1.4e-09 67.0 155 27.7
vmacro04772 Vaccinium macrocarpon HOM05D003875 ORTHO05D004240 1.8e-09 66.6 133 35.3
Carub.0006s2571 Capsella rubella HOM05D003875 ORTHO05D004240 2.3e-09 66.2 121 37.2
CARHR185110 Cardamine hirsuta HOM05D003875 ORTHO05D004240 2.3e-09 66.2 125 36.0
Lsat_1_v5_gn_6_110001 Lactuca sativa HOM05D003875 ORTHO05D004240 2.3e-09 66.2 147 29.3
BcaB07g34182 Brassica carinata HOM05D003875 ORTHO05D004240 3.9e-09 65.5 94 40.4
RcHm_v2.0_Chr3g0451351 Rosa chinensis HOM05D003875 ORTHO05D004240 6.7e-09 64.7 133 30.1
Oeu021868.1 Olea europaea HOM05D003875 ORTHO05D004240 8.8e-09 64.3 116 32.8
Thhalv10004237m.g Eutrema salsugineum HOM05D003875 ORTHO05D004240 1.1e-08 63.9 124 37.1
FAN02G3152 Fragaria x ananassa HOM05D003875 ORTHO05D004240 1.5e-08 63.5 143 29.4
Cc02_g30450 Coffea canephora HOM05D003875 ORTHO05D004240 2.5e-08 62.8 96 38.5
ECA246G2182 Erigeron canadensis HOM05D003875 ORTHO05D004240 3.3e-08 62.4 147 29.9
Sp2g20200 Schrenkiella parvula HOM05D003875 ORTHO05D004240 7.4e-08 61.2 94 40.4
THA.LOC104818632 Tarenaya hassleriana HOM05D003875 ORTHO05D004240 9.7e-08 60.8 133 30.8
CSS0036957 Camellia sinensis var. sinensis HOM05D003875 ORTHO05D004240 1.3e-07 60.5 146 27.4
Dinv30196 Davidia involucrata HOM05D003875 ORTHO05D004240 1.3e-07 60.5 65 52.3
Prupe.6G341800 Prunus persica HOM05D003875 ORTHO05D004240 2.2e-07 59.7 139 28.1
BcaC03g17761 Brassica carinata HOM05D003875 ORTHO05D004240 2.8e-07 59.3 130 33.1
C02p57750 Brassica napus HOM05D003875 ORTHO05D004240 2.8e-07 59.3 130 33.1
BolC2t11847H Brassica oleracea HOM05D003875 ORTHO05D004240 2.8e-07 59.3 130 33.1
Actinidia17831 Actinidia chinensis HOM05D003875 ORTHO05D004240 1.1e-06 57.4 89 38.2
A02p38420 Brassica napus HOM05D003875 ORTHO05D004240 1.1e-06 57.4 130 31.5
BraA02t08821Z Brassica rapa HOM05D003875 ORTHO05D004240 1.1e-06 57.4 130 31.5
SMO217G0007 Selaginella moellendorffii HOM05D000079 ORTHO05D000211 1.1e-06 57.4 129 30.2
SMO356G0498 Selaginella moellendorffii HOM05D000079 ORTHO05D000211 1.1e-06 57.4 129 30.2
Sc14g0006630 Simmondsia chinensis HOM05D003875 ORTHO05D004240 1.4e-06 57.0 145 24.8
FAN15G3748 Fragaria x ananassa HOM05D003875 ORTHO05D004240 2.4e-06 56.2 67 43.3
RcHm_v2.0_Chr5g0046431 Rosa chinensis HOM05D003875 ORTHO05D004240 2.4e-06 56.2 123 29.3
PSO210G4992 Papaver somniferum HOM05D003875 ORTHO05D004240 4.1e-06 55.5 124 29.8


User provided reference genes

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