Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.11739 Avicennia marina HOM05D000175 ORTHO05D010751 8.2e-84 315.8 158 100.0
Migut.A00274 Erythranthe guttata HOM05D000175 ORTHO05D010751 7.5e-45 186.4 161 62.7
SGA_v2.0_scaffold27G11490 Striga asiatica HOM05D000175 ORTHO05D010751 5.8e-37 160.2 123 62.6
SalBow4G3013 Salvia bowleyana HOM05D000175 ORTHO05D010751 1.6e-31 142.1 97 69.1
Cc08_g08310 Coffea canephora HOM05D000175 ORTHO05D010751 8.1e-31 139.8 151 49.0
Dinv29350 Davidia involucrata HOM05D000175 ORTHO05D010751 1.4e-30 139.0 137 52.6
Haze_21622 Corylus avellana HOM05D000175 ORTHO05D010751 3.4e-29 134.4 144 50.0
Cfa013209 Carpinus fangiana HOM05D000175 ORTHO05D010751 4.4e-29 134.0 110 58.2
COL.COLO4_24065 Corchorus olitorius HOM05D000175 ORTHO05D010751 1.7e-28 132.1 142 50.0
QL12p031294 Quercus lobata HOM05D000175 ORTHO05D010751 2.2e-28 131.7 129 52.7
Actinidia13289 Actinidia chinensis HOM05D000175 ORTHO05D010751 8.4e-28 129.8 103 60.2
Hma1.2p1_0003F.1_g003660 Hydrangea macrophylla HOM05D000175 ORTHO05D010751 1.9e-27 128.6 132 50.8
CiPaw.07G217800 Carya illinoinensis HOM05D000175 ORTHO05D010751 5.4e-27 127.1 146 47.9
MD14G1075600 Malus domestica HOM05D000175 ORTHO05D010751 9.2e-27 126.3 143 46.2
TAR629G1788 Trochodendron aralioides HOM05D000175 ORTHO05D010751 3.5e-26 124.4 150 46.0
Thecc.09G144200 Theobroma cacao HOM05D000175 ORTHO05D010751 6.0e-26 123.6 122 50.0
Manes.03G064701 Manihot esculenta HOM05D000175 ORTHO05D010751 1.0e-25 122.9 142 45.8
Prupe.1G189500 Prunus persica HOM05D000175 ORTHO05D010751 1.5e-24 119.0 141 44.7
ClCG08G012890 Citrullus lanatus HOM05D000175 ORTHO05D010751 1.6e-23 115.5 136 46.3
Duzib150G0592 Durio zibethinus HOM05D000175 ORTHO05D010751 2.1e-23 115.2 106 52.8
Gorai.010G053600 Gossypium raimondii HOM05D000175 ORTHO05D010751 4.7e-23 114.0 113 50.4
TAR636G0303 Trochodendron aralioides HOM05D000175 ORTHO05D010751 6.2e-23 113.6 140 45.7
Eucgr.H04959 Eucalyptus grandis HOM05D000175 ORTHO05D010751 8.1e-23 113.2 133 45.9
Gohir.D06G047801 Gossypium hirsutum HOM05D000175 ORTHO05D010751 2.4e-22 111.7 113 49.6
PGR102G0839 Punica granatum HOM05D000175 ORTHO05D010751 6.8e-22 110.2 151 39.7
Rhsim02G0187200 Rhododendron simsii HOM05D000175 ORTHO05D010751 1.5e-21 109.0 93 58.1
Sc12g0005540 Simmondsia chinensis HOM05D000175 ORTHO05D010751 4.9e-20 104.0 154 40.3
SHI18614 Sapria himalayana HOM05D000175 ORTHO05D010751 6.4e-20 103.6 150 40.7
MBI17_g42672_MAGBIO Magnolia biondii HOM05D000175 ORTHO05D010751 8.4e-20 103.2 102 51.0
Gohir.A11G252600 Gossypium hirsutum HOM05D000175 ORTHO05D010751 3.2e-19 101.3 100 51.0
Cpa.g.sc91.9 Carica papaya HOM05D000175 ORTHO05D010751 7.1e-19 100.1 129 43.4
TWI32G0171 Tripterygium wilfordii HOM05D000175 ORTHO05D010751 7.8e-18 96.7 134 40.3
THA.LOC104820394 Tarenaya hassleriana HOM05D000175 ORTHO05D010751 1.0e-17 96.3 131 42.0
CANSAT80G2846 Cannabis sativa HOM05D000175 ORTHO05D010751 5.1e-17 94.0 112 46.4
DCAR_022873 Daucus carota HOM05D000175 ORTHO05D010751 1.6e-15 89.0 135 37.0
CDE06G1344 Ceratophyllum demersum HOM05D000175 ORTHO05D010751 6.2e-15 87.0 110 41.8
Aqoxy1G00639 Aquilegia oxysepala HOM05D000175 ORTHO05D010751 1.2e-13 82.8 100 42.0
Duzib187G1137 Durio zibethinus HOM05D000175 ORTHO05D010751 5.1e-09 67.4 104 37.5
Gohir.A09G065401 Gossypium hirsutum HOM05D000175 ORTHO05D010751 5.1e-09 67.4 81 40.7
ATR1128G094 Amborella trichopoda HOM05D000175 ORTHO05D010751 4.3e-08 64.3 81 38.3
Manes.09G016633 Manihot esculenta HOM05D000162 ORTHO05D000090 1.8e-06 58.9 107 29.9


User provided reference genes

Program Settings