Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.11491 Avicennia marina HOM05D006995 ORTHO05D008870 7.5e-44 180.3 100 100.0
MSTRG.23164 Avicennia marina HOM05D006995 ORTHO05D008870 1.4e-37 159.5 100 86.0
Hma1.2p1_0046F.1_g027080 Hydrangea macrophylla HOM05D006995 ORTHO05D008870 5.8e-36 154.1 100 83.0
Oeu008873.1 Olea europaea HOM05D006995 ORTHO05D008870 9.9e-36 153.3 100 81.0
CSS0043708 Camellia sinensis var. sinensis HOM05D006995 ORTHO05D008870 4.9e-35 151.0 100 75.0
SalBow5G1368 Salvia bowleyana HOM05D006995 ORTHO05D008870 1.1e-34 149.8 100 83.0
SalBow5G3606 Salvia bowleyana HOM05D006995 ORTHO05D008870 1.1e-34 149.8 100 83.0
Dinv20602 Davidia involucrata HOM05D006995 ORTHO05D008870 1.9e-34 149.1 100 72.0
Cc04_g11640 Coffea canephora HOM05D006995 ORTHO05D008870 4.2e-34 147.9 100 76.0
Lj9C443G5 Lonicera japonica HOM05D006995 ORTHO05D008870 4.2e-34 147.9 100 78.0
Peaxi162Scf00089g01427 Petunia axillaris HOM05D006995 ORTHO05D008870 7.1e-34 147.1 100 71.0
Actinidia24594 Actinidia chinensis HOM05D006995 ORTHO05D008870 2.7e-33 145.2 100 77.0
TAR629G0625 Trochodendron aralioides HOM05D006995 ORTHO05D008870 1.0e-32 143.3 100 76.0
Migut.O00152 Erythranthe guttata HOM05D006995 ORTHO05D008870 3.9e-32 141.4 93 75.3
Manes.14G061000 Manihot esculenta HOM05D006995 ORTHO05D008870 6.6e-32 140.6 100 78.0
Psat5g116320 Pisum sativum HOM05D006995 ORTHO05D008870 1.9e-31 139.0 100 75.0
MD14G1172000 Malus domestica HOM05D006995 ORTHO05D008870 1.6e-30 136.0 100 73.0
Potri.012G085100 Populus trichocarpa HOM05D006995 ORTHO05D008870 3.6e-30 134.8 100 73.0
Prupe.5G166100 Prunus persica HOM05D006995 ORTHO05D008870 4.8e-30 134.4 100 67.0
RcHm_v2.0_Chr7g0192611 Rosa chinensis HOM05D006995 ORTHO05D008870 1.1e-29 133.3 100 71.0
TWI39G0505 Tripterygium wilfordii HOM05D006995 ORTHO05D008870 1.4e-29 132.9 100 74.0
TWI23G0026 Tripterygium wilfordii HOM05D006995 ORTHO05D008870 2.4e-29 132.1 100 74.0
FvH4_5g06250 Fragaria vesca HOM05D006995 ORTHO05D008870 4.0e-29 131.3 100 70.0
Nn4g22611 Nelumbo nucifera HOM05D006995 ORTHO05D008870 4.0e-29 131.3 100 71.0
QL10p006993 Quercus lobata HOM05D006995 ORTHO05D008870 4.0e-29 131.3 98 75.5
FAN08G0020 Fragaria x ananassa HOM05D006995 ORTHO05D008870 5.3e-29 131.0 100 69.0
Nitab4.5_0001793g0100 Nicotiana tabacum HOM05D006995 ORTHO05D008870 6.9e-29 130.6 100 73.0
Nitab4.5_0003703g0070 Nicotiana tabacum HOM05D006995 ORTHO05D008870 6.9e-29 130.6 100 73.0
FAN18G0637 Fragaria x ananassa HOM05D006995 ORTHO05D008870 9.0e-29 130.2 100 69.0
Glyma.04G187800 Glycine max HOM05D006995 ORTHO05D008870 1.5e-28 129.4 100 72.0
unitig_26.g8807 Utricularia gibba HOM05D006995 ORTHO05D008870 2.0e-28 129.0 100 62.0
Phvul.009G174500 Phaseolus vulgaris HOM05D006995 ORTHO05D008870 2.6e-28 128.6 100 73.0
Glyma.06G177900 Glycine max HOM05D006995 ORTHO05D008870 2.2e-27 125.6 100 70.0
arahy.Tifrunner.gnm1.ann1.W5ECLN Arachis hypogaea HOM05D006995 ORTHO05D008870 3.8e-27 124.8 100 68.0
arahy.Tifrunner.gnm1.ann1.X0DT51 Arachis hypogaea HOM05D006995 ORTHO05D008870 3.8e-27 124.8 100 68.0
Ca_16134_v3 Cicer arietinum L. HOM05D006995 ORTHO05D008870 3.8e-27 124.8 100 70.0
Solyc03g112290.2 Solanum lycopersicum HOM05D006995 ORTHO05D008870 3.8e-27 124.8 100 71.0
Sopen03g031390 Solanum pennellii HOM05D006995 ORTHO05D008870 3.8e-27 124.8 100 71.0
ClCG01G013460 Citrullus lanatus HOM05D006995 ORTHO05D008870 8.4e-27 123.6 100 69.0
MELO3C002295.2 Cucumis melo HOM05D006995 ORTHO05D008870 8.4e-27 123.6 100 69.0
PGSC0003DMG400018185 Solanum tuberosum HOM05D006995 ORTHO05D008870 8.4e-27 123.6 100 70.0
Lj1g0014247 Lotus japonicus HOM05D006995 ORTHO05D008870 1.9e-26 122.5 100 67.0
CsaV3_1G008810 Cucumis sativus L. HOM05D006995 ORTHO05D008870 3.2e-26 121.7 100 68.0
VMungo1309G2685 Vigna mungo HOM05D006995 ORTHO05D008870 3.2e-26 121.7 92 72.8
HanXRQChr04g0101331 Helianthus annuus HOM05D006995 ORTHO05D008870 4.2e-26 121.3 100 71.0
Lsat_1_v5_gn_5_14241 Lactuca sativa HOM05D006995 ORTHO05D008870 4.2e-26 121.3 98 69.4
vmacro16643 Vaccinium macrocarpon HOM05D006995 ORTHO05D008870 4.2e-26 121.3 131 58.0
CAN.G338.27 Capsicum annuum HOM05D006995 ORTHO05D008870 5.4e-26 120.9 100 69.0
CANSAT80G0726 Cannabis sativa HOM05D006995 ORTHO05D008870 1.2e-25 119.8 100 69.0
Cpa.g.sc159.33 Carica papaya HOM05D006995 ORTHO05D008870 2.7e-25 118.6 100 69.0
Sed0018383 Sechium edule HOM05D006995 ORTHO05D008870 4.6e-25 117.9 75 69.3
CiPaw.12G030600 Carya illinoinensis HOM05D006995 ORTHO05D008870 7.8e-25 117.1 100 61.0
Sp2g26260 Schrenkiella parvula HOM05D006995 ORTHO05D008870 1.3e-24 116.3 100 59.0
Lalb_Chr08g0236711 Lupinus albus HOM05D006995 ORTHO05D008870 1.7e-24 115.9 100 67.0
AL8G40200 Arabidopsis lyrata HOM05D006995 ORTHO05D008870 3.0e-24 115.2 100 65.0
Aa31LG1G18840 Aethionema arabicum HOM05D006995 ORTHO05D008870 3.9e-24 114.8 100 58.0
Medtr3g077017 Medicago truncatula HOM05D006995 ORTHO05D008870 5.1e-24 114.4 100 71.0
Thecc.03G024900 Theobroma cacao HOM05D006995 ORTHO05D008870 8.7e-24 113.6 72 73.6
BraA06t25934Z Brassica rapa HOM05D006995 ORTHO05D008870 1.1e-23 113.2 102 62.7
BcaB02g09725 Brassica carinata HOM05D006995 ORTHO05D008870 1.9e-23 112.5 101 63.4
Duzib205G0595 Durio zibethinus HOM05D006995 ORTHO05D008870 1.9e-23 112.5 100 70.0
A06p29860 Brassica napus HOM05D006995 ORTHO05D008870 5.6e-23 110.9 102 61.8
Gohir.A12G199700 Gossypium hirsutum HOM05D006995 ORTHO05D008870 5.6e-23 110.9 100 69.0
Gorai.008G217400 Gossypium raimondii HOM05D006995 ORTHO05D008870 5.6e-23 110.9 100 69.0
AT5G63135 Arabidopsis thaliana HOM05D006995 ORTHO05D008870 7.3e-23 110.5 100 65.0
Eucgr.K02801 Eucalyptus grandis HOM05D006995 ORTHO05D008870 7.3e-23 110.5 98 65.3
THA.LOC104798964 Tarenaya hassleriana HOM05D006995 ORTHO05D008870 1.6e-22 109.4 100 61.0
BolC3t18607H Brassica oleracea HOM05D006995 ORTHO05D008870 2.8e-22 108.6 102 60.8
BraA09t36465Z Brassica rapa HOM05D006995 ORTHO05D008870 3.6e-22 108.2 100 61.0
Aqoxy5G03762 Aquilegia oxysepala HOM05D006995 ORTHO05D008870 4.8e-22 107.8 100 61.0
A09p08140 Brassica napus HOM05D006995 ORTHO05D008870 4.8e-22 107.8 102 63.7
CARHR276970 Cardamine hirsuta HOM05D006995 ORTHO05D008870 6.2e-22 107.5 100 60.0
CiPaw.11G020900 Carya illinoinensis HOM05D006995 ORTHO05D008870 6.2e-22 107.5 93 68.8
Carub.0008s2389 Capsella rubella HOM05D006995 ORTHO05D008870 1.1e-21 106.7 100 65.0
Thhalv10023776m.g Eutrema salsugineum HOM05D006995 ORTHO05D008870 1.1e-21 106.7 100 60.0
Gohir.D12G202400 Gossypium hirsutum HOM05D006995 ORTHO05D008870 1.4e-21 106.3 100 69.0
PGR044G0957 Punica granatum HOM05D006995 ORTHO05D008870 2.4e-21 105.5 91 63.7
Hund02782 Selenicereus undatus HOM05D006995 ORTHO05D008870 1.2e-20 103.2 101 63.4
Ca_22795_v3 Cicer arietinum L. HOM05D001863 ORTHO05D001962 2.6e-20 102.1 80 61.2
Atru.chr9.2568 Acer truncatum HOM05D006995 ORTHO05D008870 3.4e-20 101.7 69 68.1
BcaC01g02557 Brassica carinata HOM05D006995 ORTHO05D008870 1.3e-19 99.8 102 56.9
C03p63500 Brassica napus HOM05D006995 ORTHO05D008870 1.3e-19 99.8 102 56.9
BcaC04g23358 Brassica carinata HOM05D006995 ORTHO05D008870 8.4e-19 97.1 72 62.5
C09p09200 Brassica napus HOM05D006995 ORTHO05D008870 8.4e-19 97.1 72 62.5
BolC9t53833H Brassica oleracea HOM05D006995 ORTHO05D008870 8.4e-19 97.1 72 62.5
EL10Ac5g10662 Beta vulgaris HOM05D006995 ORTHO05D008870 1.1e-18 96.7 101 63.4
ATR0824G277 Amborella trichopoda HOM05D006995 ORTHO05D008870 5.4e-18 94.4 100 51.0
ATR0743G118 Amborella trichopoda HOM05D006995 ORTHO05D008870 9.3e-18 93.6 100 51.0
SGA_v2.0_scaffold90G27846 Striga asiatica HOM05D006995 ORTHO05D008870 4.6e-17 91.3 54 79.6
HPP92_024272 Vanilla planifolia HOM05D006995 ORTHO05D008870 1.8e-16 89.4 100 56.0
Sc04g0001540 Simmondsia chinensis HOM05D006995 ORTHO05D008870 3.9e-16 88.2 100 53.0
Ah.11g042030 Amaranthus hybridus HOM05D006995 ORTHO05D008870 2.8e-14 82.0 91 58.2
Haze_07576 Corylus avellana HOM05D006995 ORTHO05D008870 8.1e-14 80.5 48 72.9
COL.COLO4_05561 Corchorus olitorius HOM05D006995 ORTHO05D008870 1.1e-13 80.1 48 77.1
ECA247G3417 Erigeron canadensis HOM05D006995 ORTHO05D008870 1.4e-13 79.7 93 59.1
Os02g0593400 Oryza sativa ssp. japonica HOM05D006995 ORTHO05D008870 6.9e-13 77.4 100 49.0
Sabra12G0061300 Salix brachista HOM05D006995 ORTHO05D008870 1.2e-12 76.6 48 70.8
GSVIVG01007657001 Vitis vinifera HOM05D006995 ORTHO05D008870 2.0e-12 75.9 61 73.8
Zm00001eb183600 Zea mays HOM05D006995 ORTHO05D008870 2.0e-12 75.9 100 48.0
Zm00001eb245930 Zea mays HOM05D006995 ORTHO05D008870 2.0e-12 75.9 100 47.0
BolC3t18603H Brassica oleracea HOM05D006995 ORTHO05D008870 4.5e-12 74.7 48 66.7
DCAR_006239 Daucus carota HOM05D006995 ORTHO05D008870 2.2e-11 72.4 80 62.5
SHI24880 Sapria himalayana HOM05D006995 ORTHO05D008870 3.8e-11 71.6 93 48.4
Nn3g16705 Nelumbo nucifera HOM05D006995 ORTHO05D008870 4.9e-11 71.2 61 73.8
Ah.11g051120 Amaranthus hybridus HOM05D006995 ORTHO05D008870 1.4e-10 69.7 82 57.3
MELO3C035410.2 Cucumis melo HOM05D006995 ORTHO05D167536 4.2e-10 68.2 46 65.2
TAR629G2225 Trochodendron aralioides HOM05D000001 ORTHO05D414751 7.1e-10 67.4 53 77.4
AUR62008151 Chenopodium quinoa HOM05D006995 ORTHO05D008870 9.3e-10 67.0 59 55.9
Mapoly0052s0030 Marchantia polymorpha HOM05D006995 ORTHO05D008870 1.6e-09 66.2 91 41.8
TPR.G22880 Trifolium pratense HOM05D006995 ORTHO05D008870 8.7e-08 60.5 52 73.1
MBI15_g24199_MAGBIO Magnolia biondii HOM05D006995 ORTHO05D008870 1.6e-06 56.2 51 72.5
C06p19720 Brassica napus HOM05D001146 ORTHO05D000973 3.7e-06 55.1 41 61.0


User provided reference genes

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