Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.11371 Avicennia marina HOM05D012087 ORTHO05D005932 3.6e-115 418.3 221 100.0
SalBow5G3698 Salvia bowleyana HOM05D012087 ORTHO05D005932 5.4e-50 201.8 217 52.5
Migut.D01759 Erythranthe guttata HOM05D012087 ORTHO05D005932 3.8e-40 169.1 221 46.6
SGA_v2.0_scaffold313G48329 Striga asiatica HOM05D012087 ORTHO05D005932 1.5e-31 140.6 227 44.5
Oeu052457.1 Olea europaea HOM05D012087 ORTHO05D005932 4.3e-23 112.5 210 42.9
Oeu047275.1 Olea europaea HOM05D012087 ORTHO05D005932 1.2e-22 110.9 185 46.5
Dinv38746 Davidia involucrata HOM05D008369 ORTHO05D005932 2.1e-17 93.6 202 38.6
Cc00_g25850 Coffea canephora HOM05D012087 ORTHO05D005932 2.3e-16 90.1 211 37.4
Dinv10658 Davidia involucrata HOM05D008369 ORTHO05D005932 5.6e-15 85.5 203 36.9
Nitab4.5_0001211g0150 Nicotiana tabacum HOM05D012087 ORTHO05D005932 1.2e-12 77.8 219 31.5
Solyc03g115730.3 Solanum lycopersicum HOM05D012087 ORTHO05D005932 1.2e-12 77.8 211 30.3
Nitab4.5_0005900g0030 Nicotiana tabacum HOM05D012087 ORTHO05D005932 2.0e-12 77.0 230 34.8
Rhsim08G0152100 Rhododendron simsii HOM05D008369 ORTHO05D005932 4.4e-12 75.9 188 35.1
Sopen03g034710 Solanum pennellii HOM05D012087 ORTHO05D005932 4.4e-12 75.9 218 29.8
CSS0001536 Camellia sinensis var. sinensis HOM05D008369 ORTHO05D005932 5.8e-12 75.5 203 34.0
Cfa019277 Carpinus fangiana HOM05D008369 ORTHO05D005932 6.4e-11 72.0 191 36.6
Ciclev10022335m.g Citrus clementina HOM05D008369 ORTHO05D005932 8.4e-11 71.6 193 33.2
CAN.G479.59 Capsicum annuum HOM05D012087 ORTHO05D005932 1.9e-10 70.5 206 31.1
Sc12g0006540 Simmondsia chinensis HOM05D008369 ORTHO05D005932 3.2e-10 69.7 215 33.0
PGSC0003DMG400024562 Solanum tuberosum HOM05D012087 ORTHO05D005932 3.2e-10 69.7 212 29.7
MD06G1197700 Malus domestica HOM05D008369 ORTHO05D005932 7.1e-10 68.6 194 40.7
CSS0024821 Camellia sinensis var. sinensis HOM05D008369 ORTHO05D005932 9.2e-10 68.2 203 32.5
Peaxi162Scf00274g00335 Petunia axillaris HOM05D012087 ORTHO05D005932 1.6e-09 67.4 210 29.5
arahy.Tifrunner.gnm1.ann1.G0M71R Arachis hypogaea HOM05D008369 ORTHO05D005932 2.1e-09 67.0 194 30.9
Manes.06G089401 Manihot esculenta HOM05D000041 ORTHO05D006140 4.6e-09 65.9 189 31.7
arahy.Tifrunner.gnm1.ann1.7B8RN4 Arachis hypogaea HOM05D008369 ORTHO05D005932 6.0e-09 65.5 194 30.9
Sed0006867 Sechium edule HOM05D008369 ORTHO05D005932 6.0e-09 65.5 195 36.9
MD14G1205100 Malus domestica HOM05D008369 ORTHO05D005932 7.8e-09 65.1 192 38.5
Medtr4g108990 Medicago truncatula HOM05D008369 ORTHO05D005932 3.0e-08 63.2 177 31.6
FAN18G3211 Fragaria x ananassa HOM05D008369 ORTHO05D005932 1.1e-07 61.2 194 30.9
unitig_26.g9652 Utricularia gibba HOM05D012087 ORTHO05D005932 1.9e-07 60.5 158 39.9
Lsat_1_v5_gn_1_14361 Lactuca sativa HOM05D008369 ORTHO05D005932 2.5e-07 60.1 176 27.8
Hund09825 Selenicereus undatus HOM05D008369 ORTHO05D005932 2.5e-07 60.1 176 31.2
FAN08G2699 Fragaria x ananassa HOM05D008369 ORTHO05D005932 3.3e-07 59.7 194 37.6
Manes.05G106200 Manihot esculenta HOM05D009095 ORTHO05D005932 7.3e-07 58.5 194 30.4
Actinidia04866 Actinidia chinensis HOM05D008369 ORTHO05D005932 9.6e-07 58.2 201 30.8
FAN13G2099 Fragaria x ananassa HOM05D008369 ORTHO05D005932 1.6e-06 57.4 194 37.1
TAR006G0004 Trochodendron aralioides HOM05D009095 ORTHO05D005932 2.1e-06 57.0 225 33.8


User provided reference genes

Program Settings