Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.11279 Avicennia marina HOM05D004927 ORTHO05D005798 1.0e-88 330.1 178 100.0
MSTRG.4598 Avicennia marina HOM05D004927 ORTHO05D005798 1.9e-58 229.6 174 74.7
SGA_v2.0_scaffold215G42324 Striga asiatica HOM05D004927 ORTHO05D005798 6.9e-56 221.1 162 74.1
Dinv23136 Davidia involucrata HOM05D004927 ORTHO05D005798 3.2e-53 212.2 172 69.8
Dinv11165 Davidia involucrata HOM05D004927 ORTHO05D005798 7.1e-53 211.1 172 70.3
Oeu056013.1 Olea europaea HOM05D004927 ORTHO05D005798 2.1e-49 199.5 177 67.8
SGA_v2.0_scaffold161G37795 Striga asiatica HOM05D004927 ORTHO05D005798 6.9e-48 194.5 219 55.3
Actinidia25582 Actinidia chinensis HOM05D004927 ORTHO05D005798 2.0e-47 193.0 172 66.3
Actinidia08867 Actinidia chinensis HOM05D004927 ORTHO05D005798 2.6e-47 192.6 169 65.7
CSS0046411 Camellia sinensis var. sinensis HOM05D004927 ORTHO05D005798 6.4e-46 188.0 172 65.1
Actinidia33102 Actinidia chinensis HOM05D004927 ORTHO05D005798 1.1e-45 187.2 172 64.0
Migut.D01264 Erythranthe guttata HOM05D004927 ORTHO05D005798 2.4e-45 186.0 172 65.1
Solyc03g111270.2 Solanum lycopersicum HOM05D004927 ORTHO05D005798 5.5e-45 184.9 171 60.2
Sopen03g030400 Solanum pennellii HOM05D004927 ORTHO05D005798 5.5e-45 184.9 171 60.2
GSVIVG01008533001 Vitis vinifera HOM05D004927 ORTHO05D005798 5.5e-45 184.9 175 61.7
Nitab4.5_0003005g0020 Nicotiana tabacum HOM05D004927 ORTHO05D005798 1.2e-44 183.7 175 63.4
vmacro19200 Vaccinium macrocarpon HOM05D004927 ORTHO05D005798 1.6e-44 183.3 159 65.4
PGR083G0131 Punica granatum HOM05D004927 ORTHO05D005798 7.9e-44 181.0 171 61.4
CiPaw.11G008400 Carya illinoinensis HOM05D004927 ORTHO05D005798 1.3e-43 180.3 173 61.3
Cc04_g10030 Coffea canephora HOM05D004927 ORTHO05D005798 2.3e-43 179.5 170 61.8
Potri.012G096900 Populus trichocarpa HOM05D004927 ORTHO05D005798 3.0e-43 179.1 171 63.7
unitig_61.g26197 Utricularia gibba HOM05D004927 ORTHO05D005798 6.7e-43 177.9 183 59.6
Oeu018539.1 Olea europaea HOM05D004927 ORTHO05D005798 1.9e-42 176.4 175 62.3
CANSAT80G0771 Cannabis sativa HOM05D004927 ORTHO05D005798 1.3e-41 173.7 177 59.3
CiPaw.12G042500 Carya illinoinensis HOM05D004927 ORTHO05D005798 2.8e-41 172.6 174 60.3
Manes.14G051700 Manihot esculenta HOM05D004927 ORTHO05D005798 2.8e-41 172.6 176 61.9
TWI23G0043 Tripterygium wilfordii HOM05D004927 ORTHO05D005798 2.8e-41 172.6 167 62.3
Glyma.05G047500 Glycine max HOM05D004927 ORTHO05D005798 1.1e-40 170.6 157 63.7
ECA247G2750 Erigeron canadensis HOM05D004927 ORTHO05D005798 1.4e-40 170.2 170 57.6
Potri.015G094600 Populus trichocarpa HOM05D004927 ORTHO05D005798 1.4e-40 170.2 174 60.9
Lsat_1_v5_gn_1_29040 Lactuca sativa HOM05D004927 ORTHO05D005798 3.1e-40 169.1 150 63.3
Dinv04882 Davidia involucrata HOM05D004927 ORTHO05D005798 4.0e-40 168.7 129 72.1
MD06G1142800 Malus domestica HOM05D004927 ORTHO05D005798 9.0e-40 167.5 175 59.4
CsaV3_1G000620 Cucumis sativus L. HOM05D004927 ORTHO05D005798 3.4e-39 165.6 161 62.1
AT5G63460 Arabidopsis thaliana HOM05D004927 ORTHO05D005798 4.5e-39 165.2 171 59.6
MELO3C026211.2 Cucumis melo HOM05D004927 ORTHO05D005798 4.5e-39 165.2 161 62.1
HanXRQChr07g0193231 Helianthus annuus HOM05D004927 ORTHO05D005798 4.5e-39 165.2 150 64.7
Prupe.5G152100 Prunus persica HOM05D004927 ORTHO05D005798 4.5e-39 165.2 172 60.5
SalBow1G5982 Salvia bowleyana HOM05D004927 ORTHO05D005798 4.5e-39 165.2 172 62.8
AL8G40520 Arabidopsis lyrata HOM05D004927 ORTHO05D005798 1.0e-38 164.1 171 60.2
Phvul.003G210400 Phaseolus vulgaris HOM05D004927 ORTHO05D005798 1.3e-38 163.7 157 61.8
Sed0011812 Sechium edule HOM05D004927 ORTHO05D005798 1.3e-38 163.7 153 62.7
Ciclev10022591m.g Citrus clementina HOM05D004927 ORTHO05D005798 1.7e-38 163.3 176 59.7
Rhsim08G0189300 Rhododendron simsii HOM05D004927 ORTHO05D005798 1.7e-38 163.3 183 56.3
CARHR277310 Cardamine hirsuta HOM05D004927 ORTHO05D005798 6.5e-38 161.4 164 59.1
MD14G1158000 Malus domestica HOM05D004927 ORTHO05D005798 6.5e-38 161.4 172 57.0
Duzib205G1407 Durio zibethinus HOM05D004927 ORTHO05D005798 8.4e-38 161.0 167 60.5
Duzib068G0304 Durio zibethinus HOM05D004927 ORTHO05D005798 1.1e-37 160.6 152 58.6
Thecc.03G128000 Theobroma cacao HOM05D004927 ORTHO05D005798 1.1e-37 160.6 172 57.6
THA.LOC104798947 Tarenaya hassleriana HOM05D004927 ORTHO05D005798 1.4e-37 160.2 175 58.9
Gohir.A11G036100 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.9e-37 159.8 174 57.5
MBI07_g34620_MAGBIO Magnolia biondii HOM05D004927 ORTHO05D005798 2.5e-37 159.5 150 60.7
Manes.06G118800 Manihot esculenta HOM05D004927 ORTHO05D005798 3.2e-37 159.1 141 64.5
THA.LOC104818187 Tarenaya hassleriana HOM05D004927 ORTHO05D005798 3.2e-37 159.1 172 60.5
Gohir.D11G039650 Gossypium hirsutum HOM05D004927 ORTHO05D005798 4.2e-37 158.7 174 58.6
Nn3g16487 Nelumbo nucifera HOM05D004927 ORTHO05D005798 5.5e-37 158.3 186 55.9
TWI39G0602 Tripterygium wilfordii HOM05D004927 ORTHO05D005798 1.2e-36 157.1 165 58.2
Sp2g26540 Schrenkiella parvula HOM05D004927 ORTHO05D005798 2.1e-36 156.4 171 59.1
Glyma.17G129300 Glycine max HOM05D004927 ORTHO05D005798 2.7e-36 156.0 144 63.9
Carub.0008s2416 Capsella rubella HOM05D004927 ORTHO05D005798 6.0e-36 154.8 170 57.1
Aa31LG1G18580 Aethionema arabicum HOM05D004927 ORTHO05D005798 7.9e-36 154.5 175 56.0
Thhalv10005047m.g Eutrema salsugineum HOM05D004927 ORTHO05D005798 2.3e-35 152.9 175 57.1
SalBow1G7483 Salvia bowleyana HOM05D004927 ORTHO05D005798 2.3e-35 152.9 201 53.7
Gorai.007G042600 Gossypium raimondii HOM05D004927 ORTHO05D005798 5.1e-35 151.8 178 56.7
BcaC04g23330 Brassica carinata HOM05D004927 ORTHO05D005798 8.7e-35 151.0 175 56.6
HanXRQChr09g0273101 Helianthus annuus HOM05D004927 ORTHO05D005798 1.1e-34 150.6 166 56.0
Atru.chr9.1061 Acer truncatum HOM05D004927 ORTHO05D005798 1.5e-34 150.2 147 61.2
FvH4_5g08180 Fragaria vesca HOM05D004927 ORTHO05D005798 3.3e-34 149.1 175 57.1
RcHm_v2.0_Chr7g0190331 Rosa chinensis HOM05D004927 ORTHO05D005798 3.3e-34 149.1 179 55.9
Lj4g0014142 Lotus japonicus HOM05D004927 ORTHO05D005798 4.3e-34 148.7 152 57.2
Sabra12G0070900 Salix brachista HOM05D004927 ORTHO05D005798 1.3e-33 147.1 172 55.2
VMungo1215G0874 Vigna mungo HOM05D004927 ORTHO05D005798 6.3e-33 144.8 136 64.7
DCAR_026226 Daucus carota HOM05D004927 ORTHO05D005798 1.8e-32 143.3 164 53.0
CDE02G1054 Ceratophyllum demersum HOM05D004927 ORTHO05D005798 3.1e-32 142.5 146 56.8
Sc04g0000700 Simmondsia chinensis HOM05D004927 ORTHO05D005798 3.1e-32 142.5 166 55.4
Haze_07225 Corylus avellana HOM05D004927 ORTHO05D005798 2.0e-31 139.8 131 62.6
PSO063G5502 Papaver somniferum HOM05D004927 ORTHO05D005798 5.9e-31 138.3 160 55.6
A09p08260 Brassica napus HOM05D004927 ORTHO05D005798 2.2e-30 136.3 164 55.5
Nitab4.5_0016919g0010 Nicotiana tabacum HOM05D004927 ORTHO05D005798 2.2e-30 136.3 135 60.7
BcaB04g19918 Brassica carinata HOM05D004927 ORTHO05D005798 2.9e-30 136.0 165 54.5
Lsat_1_v5_gn_4_80380 Lactuca sativa HOM05D004927 ORTHO05D005798 2.9e-30 136.0 159 55.3
Lalb_Chr13g0297281 Lupinus albus HOM05D004927 ORTHO05D005798 2.9e-30 136.0 153 57.5
HPP92_001413 Vanilla planifolia HOM05D004927 ORTHO05D005798 5.0e-30 135.2 155 56.8
C09p09350 Brassica napus HOM05D000789 ORTHO05D005798 6.5e-30 134.8 165 54.5
BolC9t53847H Brassica oleracea HOM05D000789 ORTHO05D005798 6.5e-30 134.8 165 54.5
TAR622G0157 Trochodendron aralioides HOM05D004927 ORTHO05D005798 6.5e-30 134.8 156 52.6
Sabra15G0116000 Salix brachista HOM05D004927 ORTHO05D005798 1.1e-29 134.0 189 49.7
Aqoxy3G01521 Aquilegia oxysepala HOM05D004927 ORTHO05D005798 1.4e-29 133.7 157 52.2
FAN18G3853 Fragaria x ananassa HOM05D004927 ORTHO05D005798 1.4e-29 133.7 162 56.2
PSO478G0696 Papaver somniferum HOM05D004927 ORTHO05D005798 1.9e-29 133.3 165 50.9
Medtr4g103580 Medicago truncatula HOM05D004927 ORTHO05D005798 2.5e-29 132.9 159 50.9
PGSC0003DMG400015243 Solanum tuberosum HOM05D004927 ORTHO05D005798 3.2e-29 132.5 176 52.3
Gorai.006G271700 Gossypium raimondii HOM05D004927 ORTHO05D005798 4.2e-29 132.1 173 49.1
FAN04G0012 Fragaria x ananassa HOM05D004927 ORTHO05D005798 5.5e-29 131.7 162 54.9
FAN13G0393 Fragaria x ananassa HOM05D004927 ORTHO05D005798 1.6e-28 130.2 162 55.6
Lalb_Chr12g0202181 Lupinus albus HOM05D004927 ORTHO05D005798 2.1e-28 129.8 157 56.1
PSO017G7268 Papaver somniferum HOM05D004927 ORTHO05D005798 2.1e-28 129.8 177 48.6
Migut.I00501 Erythranthe guttata HOM05D004927 ORTHO05D005798 3.6e-28 129.0 141 57.4
FAN08G3438 Fragaria x ananassa HOM05D004927 ORTHO05D005798 1.3e-27 127.1 162 54.9
arahy.Tifrunner.gnm1.ann1.9DG48R Arachis hypogaea HOM05D004927 ORTHO05D005798 1.8e-27 126.7 135 58.5
arahy.Tifrunner.gnm1.ann1.PKYK26 Arachis hypogaea HOM05D004927 ORTHO05D005798 1.8e-27 126.7 135 58.5
Psat0s2546g0040 Pisum sativum HOM05D004927 ORTHO05D005798 1.8e-27 126.7 153 51.0
TPR.G19215 Trifolium pratense HOM05D004927 ORTHO05D005798 1.8e-27 126.7 158 50.0
QL10p003733 Quercus lobata HOM05D004927 ORTHO05D005798 3.0e-27 125.9 124 55.6
BraA09t36477Z Brassica rapa HOM05D004927 ORTHO05D005798 3.9e-27 125.6 177 50.8
Gohir.A09G247250 Gossypium hirsutum HOM05D004927 ORTHO05D005798 8.8e-27 124.4 162 51.9
Zm00001eb169640 Zea mays HOM05D004927 ORTHO05D005798 1.9e-26 123.2 154 48.7
Lj9A478G96 Lonicera japonica HOM05D004927 ORTHO05D005798 4.3e-26 122.1 148 53.4
vmacro16676 Vaccinium macrocarpon HOM05D004927 ORTHO05D005798 1.3e-25 120.6 113 64.6
Gorai.004G275800 Gossypium raimondii HOM05D004927 ORTHO05D005798 6.3e-25 118.2 179 44.7
CDE05G1557 Ceratophyllum demersum HOM05D004927 ORTHO05D005798 8.2e-25 117.9 122 56.6
PSO782G2667 Papaver somniferum HOM05D004927 ORTHO05D005798 8.2e-25 117.9 152 51.3
Os11g0483600 Oryza sativa ssp. japonica HOM05D004927 ORTHO05D005798 1.4e-24 117.1 181 44.2
AagrBONN_evm.TU.Sc2ySwM_344.432 Anthoceros agrestis HOM05D004927 ORTHO05D005798 4.1e-24 115.5 150 46.7
Os12g0442900 Oryza sativa ssp. japonica HOM05D004927 ORTHO05D005798 5.3e-24 115.2 163 47.2
EL10As4g23391 Beta vulgaris HOM05D004927 ORTHO05D005798 9.1e-24 114.4 153 49.7
ClCG06G017840 Citrullus lanatus HOM05D004927 ORTHO05D005798 3.4e-23 112.5 101 64.4
Eucgr.B00112 Eucalyptus grandis HOM05D004927 ORTHO05D005798 3.8e-22 109.0 115 56.5
Gohir.D08G258600 Gossypium hirsutum HOM05D004927 ORTHO05D005798 1.4e-21 107.1 162 48.8
CAN.G352.25 Capsicum annuum HOM05D004927 ORTHO05D005798 2.7e-20 102.8 96 60.4
ATR0561G036 Amborella trichopoda HOM05D004927 ORTHO05D005798 3.6e-20 102.4 69 72.5
CBR_g27958 Chara braunii HOM05D004927 ORTHO05D005798 3.0e-19 99.4 160 42.5
Pp3c8_10310 Physcomitrium patens HOM05D004927 ORTHO05D005798 3.0e-19 99.4 153 41.2
Gohir.A09G246700 Gossypium hirsutum HOM05D004927 ORTHO05D005798 3.7e-17 92.4 108 54.6
CBR_g36334 Chara braunii HOM05D004927 ORTHO05D005798 8.2e-17 91.3 169 39.1
BolC2t12346H Brassica oleracea HOM05D001512 ORTHO05D001574 1.8e-16 90.1 114 52.6
C02p62750 Brassica napus HOM05D001512 ORTHO05D001574 9.1e-16 87.8 114 51.8
HPP92_001420 Vanilla planifolia HOM05D004927 ORTHO05D005798 1.5e-15 87.0 110 47.3
Hma1.2p1_2767F.1_g328170 Hydrangea macrophylla HOM05D004927 ORTHO05D005798 6.5e-14 81.6 81 63.0
BcaC03g18207 Brassica carinata HOM05D004927 ORTHO05D005798 8.5e-14 81.3 149 43.0
COL.COLO4_28098 Corchorus olitorius HOM05D004927 ORTHO05D005798 1.1e-13 80.9 96 50.0
Lsat_1_v5_gn_5_95420 Lactuca sativa HOM05D004927 ORTHO05D005798 1.1e-13 80.9 83 54.2
Oeu037712.1 Olea europaea HOM05D004927 ORTHO05D005798 1.1e-13 80.9 56 71.4
Mapoly0121s0035 Marchantia polymorpha HOM05D004927 ORTHO05D005798 3.2e-13 79.3 110 46.4
Gohir.D09G248000 Gossypium hirsutum HOM05D004927 ORTHO05D005798 2.3e-11 73.2 76 53.9
Gohir.D07G062100 Gossypium hirsutum HOM05D004927 ORTHO05D005798 3.0e-11 72.8 57 66.7
Gohir.D01G081600 Gossypium hirsutum HOM05D004927 ORTHO05D005798 5.2e-11 72.0 57 66.7
Gorai.007G057300 Gossypium raimondii HOM05D004927 ORTHO05D005798 5.2e-11 72.0 57 66.7
Gohir.D11G291800 Gossypium hirsutum HOM05D004927 ORTHO05D005798 3.3e-10 69.3 56 66.1
SMO334G0034 Selaginella moellendorffii HOM05D004927 ORTHO05D005798 7.4e-10 68.2 170 36.5
AUR62029623 Chenopodium quinoa HOM05D004927 ORTHO05D005798 4.1e-08 62.4 61 60.7
unitig_0.g1072 Utricularia gibba HOM05D004927 ORTHO05D005798 5.3e-08 62.0 57 66.7
Gohir.D09G247201 Gossypium hirsutum HOM05D004927 ORTHO05D005798 2.0e-07 60.1 64 50.0
Cfa018832 Carpinus fangiana HOM05D004927 ORTHO05D005798 2.6e-07 59.7 85 48.2
SEGI_27141 Sequoiadendron giganteum HOM05D004927 ORTHO05D005798 4.5e-07 58.9 66 50.0
ECA232G0032 Erigeron canadensis HOM05D004927 ORTHO05D005798 5.9e-07 58.5 99 45.5
Cpa.g.sc13.128 Carica papaya HOM05D004927 ORTHO05D005798 7.7e-07 58.2 60 61.7
SEGI_01314 Sequoiadendron giganteum HOM05D004927 ORTHO05D005798 1.0e-06 57.8 41 65.9
BraA02t09201Z Brassica rapa HOM05D004927 ORTHO05D005798 5.0e-06 55.5 98 43.9
PRCOL_00006426 Prasinoderma coloniale HOM05D004927 ORTHO05D005798 6.5e-06 55.1 59 47.5


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