Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.11267 Avicennia marina HOM05D008631 ORTHO05D010718 3.0e-126 455.3 245 100.0
Migut.I00551 Erythranthe guttata HOM05D008631 ORTHO05D010718 6.8e-30 135.2 261 42.9
Dinv23168 Davidia involucrata HOM05D008631 ORTHO05D010718 1.6e-23 114.0 238 39.5
TAR629G0833 Trochodendron aralioides HOM05D008631 ORTHO05D010718 7.6e-21 105.1 244 33.6
Cfa018774 Carpinus fangiana HOM05D008631 ORTHO05D010718 3.8e-20 102.8 252 35.3
MD14G1154600 Malus domestica HOM05D008631 ORTHO05D010718 8.4e-20 101.7 248 32.7
FAN18G4587 Fragaria x ananassa HOM05D008631 ORTHO05D010718 3.2e-19 99.8 247 37.2
FvH4_5g08620 Fragaria vesca HOM05D008631 ORTHO05D010718 4.1e-19 99.4 247 36.8
FAN13G1892 Fragaria x ananassa HOM05D008631 ORTHO05D010718 4.1e-19 99.4 247 37.2
MD06G1138600 Malus domestica HOM05D008631 ORTHO05D010718 4.1e-19 99.4 257 33.5
FAN08G1367 Fragaria x ananassa HOM05D008631 ORTHO05D010718 4.6e-18 95.9 181 39.8
Prupe.5G148800 Prunus persica HOM05D008631 ORTHO05D010718 4.6e-18 95.9 126 47.6
QL10p002471 Quercus lobata HOM05D008631 ORTHO05D010718 1.0e-17 94.7 259 32.8
Haze_07165 Corylus avellana HOM05D008631 ORTHO05D010718 2.3e-17 93.6 266 35.0
CiPaw.12G044800 Carya illinoinensis HOM05D008631 ORTHO05D010718 1.1e-16 91.3 263 33.1
FAN04G0039 Fragaria x ananassa HOM05D008631 ORTHO05D010718 1.1e-16 91.3 181 39.2
Peaxi162Scf01390g00006 Petunia axillaris HOM05D008631 ORTHO05D010718 2.5e-16 90.1 241 33.2
Manes.14G049400 Manihot esculenta HOM05D008631 ORTHO05D010718 1.2e-15 87.8 238 33.6
Nn4g22271 Nelumbo nucifera HOM05D008631 ORTHO05D010718 2.4e-14 83.6 252 35.7
RcHm_v2.0_Chr7g0189791 Rosa chinensis HOM05D008631 ORTHO05D010718 5.2e-14 82.4 247 33.6
Manes.06G121100 Manihot esculenta HOM05D008631 ORTHO05D010718 2.6e-13 80.1 258 31.0
Thecc.03G132000 Theobroma cacao HOM05D008631 ORTHO05D010718 1.7e-12 77.4 194 35.1
Gorai.008G207200 Gossypium raimondii HOM05D008631 ORTHO05D010718 1.4e-11 74.3 253 31.2
SGA_v2.0_scaffold40G15557 Striga asiatica HOM05D008631 ORTHO05D010718 1.4e-11 74.3 236 30.9
Solyc03g019740.1 Solanum lycopersicum HOM05D008631 ORTHO05D010718 1.6e-10 70.9 254 28.3
Gohir.D12G192650 Gossypium hirsutum HOM05D008631 ORTHO05D010718 3.5e-10 69.7 253 30.8
Potri.012G100900 Populus trichocarpa HOM05D008631 ORTHO05D010718 7.8e-10 68.6 270 28.1
Potri.015G099100 Populus trichocarpa HOM05D008631 ORTHO05D010718 1.3e-09 67.8 220 31.8
COL.COLO4_06540 Corchorus olitorius HOM05D008631 ORTHO05D010718 2.3e-09 67.0 103 49.5
Nn3g16411 Nelumbo nucifera HOM05D008631 ORTHO05D010718 6.6e-09 65.5 126 39.7
VMungo1309G1529 Vigna mungo HOM05D008631 ORTHO05D010718 1.1e-08 64.7 100 45.0
Cfa018773 Carpinus fangiana HOM05D008631 ORTHO05D010718 1.5e-08 64.3 182 34.6
Glyma.04G197200 Glycine max HOM05D008631 ORTHO05D010718 1.5e-08 64.3 107 36.4
Lsat_1_v5_gn_1_33001 Lactuca sativa HOM05D008631 ORTHO05D010718 3.3e-08 63.2 258 28.7
Actinidia18339 Actinidia chinensis HOM05D004514 ORTHO05D005147 9.6e-08 61.6 179 30.7
Phvul.009G165000 Phaseolus vulgaris HOM05D008631 ORTHO05D010718 1.6e-07 60.8 100 42.0
Atru.chr6.1827 Acer truncatum HOM05D008631 ORTHO05D010718 2.1e-07 60.5 99 41.4
Nitab4.5_0010179g0050 Nicotiana tabacum HOM05D008631 ORTHO05D010718 1.1e-06 58.2 65 50.8
Sabra15G0120000 Salix brachista HOM05D008631 ORTHO05D010718 2.4e-06 57.0 206 29.6
Peaxi162Scf00089g00016 Petunia axillaris HOM05D008631 ORTHO05D010718 4.0e-06 56.2 73 43.8
Haze_07166 Corylus avellana HOM05D008631 ORTHO05D010718 6.9e-06 55.5 247 30.4


User provided reference genes

Program Settings