Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.11241 Avicennia marina HOM05D007091 ORTHO05D008768 6.8e-96 354.0 177 100.0
Migut.I00575 Erythranthe guttata HOM05D007091 ORTHO05D008768 4.3e-66 255.0 177 75.7
QL09p036643 Quercus lobata HOM05D007091 ORTHO05D008768 8.6e-59 230.7 173 67.6
Cfa020656 Carpinus fangiana HOM05D007091 ORTHO05D008768 1.9e-58 229.6 171 67.3
Lalb_Chr22g0353631 Lupinus albus HOM05D007091 ORTHO05D008768 5.6e-58 228.0 171 67.3
CiPaw.15G149800 Carya illinoinensis HOM05D007091 ORTHO05D008768 1.2e-57 226.9 167 68.3
vmacro18668 Vaccinium macrocarpon HOM05D007091 ORTHO05D008768 6.2e-57 224.6 170 65.3
Prupe.5G238600 Prunus persica HOM05D007091 ORTHO05D008768 1.8e-56 223.0 171 66.7
TAR629G3120 Trochodendron aralioides HOM05D007091 ORTHO05D008768 6.8e-56 221.1 170 66.5
Actinidia34668 Actinidia chinensis HOM05D007091 ORTHO05D008768 1.5e-55 219.9 171 63.7
CSS0046666 Camellia sinensis var. sinensis HOM05D007091 ORTHO05D008768 1.5e-55 219.9 172 66.9
Glyma.09G170700 Glycine max HOM05D007091 ORTHO05D008768 2.0e-55 219.5 174 62.6
Dinv01447 Davidia involucrata HOM05D007091 ORTHO05D008768 3.4e-55 218.8 171 66.1
TWI15G0826 Tripterygium wilfordii HOM05D007091 ORTHO05D008768 3.4e-55 218.8 171 64.9
GSVIVG01000383001 Vitis vinifera HOM05D007091 ORTHO05D008768 9.9e-55 217.2 176 63.1
arahy.Tifrunner.gnm1.ann1.0PBM2M Arachis hypogaea HOM05D007091 ORTHO05D008768 2.2e-54 216.1 177 64.4
MD06G1234100 Malus domestica HOM05D007091 ORTHO05D008768 2.2e-54 216.1 171 64.3
Aqoxy3G04057 Aquilegia oxysepala HOM05D007091 ORTHO05D008768 2.9e-54 215.7 171 64.9
Cc04_g09250 Coffea canephora HOM05D007091 ORTHO05D008768 2.9e-54 215.7 170 65.3
Potri.012G041400 Populus trichocarpa HOM05D007091 ORTHO05D008768 3.7e-54 215.3 169 65.7
Dinv32110 Davidia involucrata HOM05D007091 ORTHO05D008768 4.9e-54 214.9 173 64.2
Atru.chr9.1636 Acer truncatum HOM05D007091 ORTHO05D008768 6.4e-54 214.5 167 67.1
MD14G1240800 Malus domestica HOM05D007091 ORTHO05D008768 6.4e-54 214.5 170 64.1
RcHm_v2.0_Chr7g0177781 Rosa chinensis HOM05D007091 ORTHO05D008768 6.4e-54 214.5 171 62.6
Ciclev10026363m.g Citrus clementina HOM05D007091 ORTHO05D008768 1.4e-53 213.4 168 65.5
FAN13G0023 Fragaria x ananassa HOM05D007091 ORTHO05D008768 2.4e-53 212.6 171 62.0
Nn4g24542 Nelumbo nucifera HOM05D007091 ORTHO05D008768 3.2e-53 212.2 173 64.2
FvH4_5g17800 Fragaria vesca HOM05D007091 ORTHO05D008768 7.1e-53 211.1 171 60.8
Eucgr.H00567 Eucalyptus grandis HOM05D007091 ORTHO05D008768 1.2e-52 210.3 171 63.7
arahy.Tifrunner.gnm1.ann1.M1K315 Arachis hypogaea HOM05D007091 ORTHO05D008768 2.7e-52 209.1 171 64.3
Ca_20293_v3 Cicer arietinum L. HOM05D007091 ORTHO05D008768 3.5e-52 208.8 173 59.5
Phvul.004G146400 Phaseolus vulgaris HOM05D007091 ORTHO05D008768 4.6e-52 208.4 176 60.2
CDE07G0316 Ceratophyllum demersum HOM05D007091 ORTHO05D008768 1.0e-51 207.2 171 62.6
TPR.G31708 Trifolium pratense HOM05D007091 ORTHO05D008768 1.0e-51 207.2 174 62.1
ATR0598G099 Amborella trichopoda HOM05D007091 ORTHO05D008768 1.7e-51 206.5 173 61.8
Hma1.2p1_0844F.1_g227450 Hydrangea macrophylla HOM05D007091 ORTHO05D008768 2.3e-51 206.1 175 64.0
VMungo0464G0064 Vigna mungo HOM05D007091 ORTHO05D008768 3.0e-51 205.7 169 59.8
MELO3C001924.2 Cucumis melo HOM05D007091 ORTHO05D008768 5.1e-51 204.9 170 60.0
Sabra12G0028500 Salix brachista HOM05D007091 ORTHO05D008768 6.6e-51 204.5 176 61.4
ClCG04G012810 Citrullus lanatus HOM05D007091 ORTHO05D008768 8.6e-51 204.1 177 58.2
CsaV3_1G004900 Cucumis sativus L. HOM05D007091 ORTHO05D008768 8.6e-51 204.1 170 60.0
DCAR_004559 Daucus carota HOM05D007091 ORTHO05D009263 1.1e-50 203.8 192 58.3
Lj2g0019861 Lotus japonicus HOM05D007091 ORTHO05D008768 1.9e-50 203.0 171 61.4
SGA_v2.0_scaffold40G15610 Striga asiatica HOM05D007091 ORTHO05D008768 1.9e-50 203.0 131 76.3
Gohir.D11G227400 Gossypium hirsutum HOM05D007091 ORTHO05D008768 3.3e-50 202.2 167 62.3
HPP92_007322 Vanilla planifolia HOM05D007091 ORTHO05D008768 3.3e-50 202.2 169 60.4
Duzib264G1108 Durio zibethinus HOM05D007091 ORTHO05D008768 7.3e-50 201.1 171 62.0
Gorai.007G246600 Gossypium raimondii HOM05D007091 ORTHO05D008768 7.3e-50 201.1 167 61.7
Gohir.A11G233700 Gossypium hirsutum HOM05D007091 ORTHO05D008768 9.6e-50 200.7 167 62.3
Os05g0387800 Oryza sativa ssp. japonica HOM05D007091 ORTHO05D008768 1.6e-49 199.9 172 61.0
SEGI_35239 Sequoiadendron giganteum HOM05D007091 ORTHO05D008768 2.1e-49 199.5 172 60.5
COL.COLO4_24457 Corchorus olitorius HOM05D007091 ORTHO05D008768 2.8e-49 199.1 167 62.3
Manes.14G173700 Manihot esculenta HOM05D007091 ORTHO05D008768 1.1e-48 197.2 168 60.1
Medtr6g072100 Medicago truncatula HOM05D007091 ORTHO05D008768 1.1e-48 197.2 174 60.3
HanXRQChr06g0179681 Helianthus annuus HOM05D007091 ORTHO05D008768 1.8e-48 196.4 172 60.5
SEGI_03292 Sequoiadendron giganteum HOM05D007091 ORTHO05D008768 1.8e-48 196.4 168 63.1
Zm00001eb256360 Zea mays HOM05D007091 ORTHO05D008768 1.8e-48 196.4 170 61.8
Sc10g0009000 Simmondsia chinensis HOM05D007091 ORTHO05D008768 1.2e-47 193.7 167 59.9
Thecc.03G065800 Theobroma cacao HOM05D007091 ORTHO05D008768 1.5e-47 193.4 169 58.6
ECA238G0701 Erigeron canadensis HOM05D007091 ORTHO05D008768 2.6e-47 192.6 170 57.6
EL10Ac1g00193 Beta vulgaris HOM05D007091 ORTHO05D008768 4.4e-47 191.8 171 59.6
CAN.G65.99 Capsicum annuum HOM05D007091 ORTHO05D008768 4.4e-47 191.8 176 56.2
AUR62022670 Chenopodium quinoa HOM05D007091 ORTHO05D008768 7.6e-47 191.0 170 59.4
Oeu058744.1 Olea europaea HOM05D007091 ORTHO05D008768 7.6e-47 191.0 129 75.2
Sopen06g028870 Solanum pennellii HOM05D007091 ORTHO05D008768 2.9e-46 189.1 176 56.8
Solyc06g072500.2 Solanum lycopersicum HOM05D007091 ORTHO05D008768 6.4e-46 188.0 176 56.2
Peaxi162Scf01064g00022 Petunia axillaris HOM05D007091 ORTHO05D008768 1.4e-45 186.8 171 56.1
AT1G18335 Arabidopsis thaliana HOM05D007091 ORTHO05D008768 2.4e-45 186.0 175 59.4
AUR62004555 Chenopodium quinoa HOM05D007091 ORTHO05D008768 5.4e-45 184.9 171 59.1
Sp1g16300 Schrenkiella parvula HOM05D007091 ORTHO05D008768 9.3e-45 184.1 171 56.7
SMO347G0535 Selaginella moellendorffii HOM05D007091 ORTHO05D008768 9.3e-45 184.1 167 58.1
BcaB03g12975 Brassica carinata HOM05D007091 ORTHO05D008768 1.2e-44 183.7 169 57.4
Nitab4.5_0000033g0140 Nicotiana tabacum HOM05D007091 ORTHO05D008768 1.2e-44 183.7 172 55.2
Lsat_1_v5_gn_2_11841 Lactuca sativa HOM05D007091 ORTHO05D008768 2.1e-44 183.0 172 59.3
AL1G30710 Arabidopsis lyrata HOM05D007091 ORTHO05D008768 2.7e-44 182.6 171 57.9
Nitab4.5_0005533g0060 Nicotiana tabacum HOM05D007091 ORTHO05D008768 6.0e-44 181.4 171 55.0
BraA08t34976Z Brassica rapa HOM05D007091 ORTHO05D008768 7.8e-44 181.0 167 58.1
Haze_18937 Corylus avellana HOM05D007091 ORTHO05D008768 1.3e-43 180.3 133 66.9
Mapoly0049s0094 Marchantia polymorpha HOM05D007091 ORTHO05D008768 1.3e-43 180.3 177 53.7
Pp3c17_14350 Physcomitrium patens HOM05D007091 ORTHO05D008768 1.3e-43 180.3 170 56.5
Thhalv10008624m.g Eutrema salsugineum HOM05D007091 ORTHO05D008768 2.3e-43 179.5 171 57.3
SHI19106 Sapria himalayana HOM05D007091 ORTHO05D008768 3.0e-43 179.1 164 57.9
A08p30440 Brassica napus HOM05D007091 ORTHO05D008768 3.9e-43 178.7 167 58.7
FAN04G2000 Fragaria x ananassa HOM05D007091 ORTHO05D008768 6.6e-43 177.9 146 60.3
Carub.0001s1796 Capsella rubella HOM05D007091 ORTHO05D008768 8.7e-43 177.6 173 56.6
BcaC07g38895 Brassica carinata HOM05D007091 ORTHO05D008768 1.1e-42 177.2 173 57.2
C08p18530 Brassica napus HOM05D007091 ORTHO05D008768 1.9e-42 176.4 167 58.7
PSO384G3314 Papaver somniferum HOM05D007091 ORTHO05D008768 1.9e-42 176.4 164 59.1
Aa31LG7G2780 Aethionema arabicum HOM05D007091 ORTHO05D008768 2.5e-42 176.0 163 57.7
BolC8t49485H Brassica oleracea HOM05D007091 ORTHO05D008768 3.3e-42 175.6 167 58.1
CARHR018920 Cardamine hirsuta HOM05D007091 ORTHO05D008768 5.6e-42 174.9 171 55.0
CANSAT35G2054 Cannabis sativa HOM05D007091 ORTHO05D008768 2.1e-41 172.9 176 51.7
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 6.2e-41 171.4 170 55.9
PSO421G0160 Papaver somniferum HOM05D007091 ORTHO05D008768 2.4e-40 169.5 164 57.3
Lj9P415T25 Lonicera japonica HOM05D007091 ORTHO05D008768 4.4e-39 165.2 133 62.4
Atru.chr9.1624 Acer truncatum HOM05D007091 ORTHO05D008768 5.8e-39 164.9 131 66.4
Psat1g124480 Pisum sativum HOM05D007091 ORTHO05D008768 3.8e-38 162.2 133 62.4
PGSC0003DMG401027044 Solanum tuberosum HOM05D007091 ORTHO05D008768 6.0e-36 154.8 134 60.4
Os02g0772300 Oryza sativa ssp. japonica HOM05D007091 ORTHO05D008768 1.0e-35 154.1 130 61.5
Pp3c15_11610 Physcomitrium patens HOM05D000137 ORTHO05D008768 1.8e-32 143.3 173 46.8
Pp3c9_11360 Physcomitrium patens HOM05D000137 ORTHO05D000382 4.0e-32 142.1 173 49.1
unitig_21.g20331 Utricularia gibba HOM05D007091 ORTHO05D008768 3.8e-30 135.6 104 66.3
AagrBONN_evm.TU.Sc2ySwM_228.1246 Anthoceros agrestis HOM05D007091 ORTHO05D008768 4.9e-30 135.2 133 52.6
Hund27153 Selenicereus undatus HOM05D007091 ORTHO05D008768 3.5e-28 129.0 168 45.8
Sed0004344 Sechium edule HOM05D007091 ORTHO05D008768 9.6e-26 120.9 107 53.3
CBR_g40646 Chara braunii HOM05D007091 ORTHO05D008768 3.7e-25 119.0 146 47.9
MCO05G578 Micromonas commoda HOM05D007091 ORTHO05D008768 1.1e-24 117.5 162 45.1
C02p62570 Brassica napus HOM05D001735 ORTHO05D001640 4.3e-18 95.5 73 68.5
BcaC03g18194 Brassica carinata HOM05D007091 ORTHO05D008768 1.3e-17 94.0 89 55.1
BolC2t12316H Brassica oleracea HOM05D007091 ORTHO05D008768 1.3e-17 94.0 89 55.1
TWI81G1026 Tripterygium wilfordii HOM05D007091 ORTHO05D008768 9.0e-16 87.8 103 47.6
PSO832G1393 Papaver somniferum HOM05D007091 ORTHO05D008768 1.3e-14 84.0 93 53.8
MCO07G264 Micromonas commoda HOM05D007091 ORTHO05D008768 2.5e-10 69.7 127 35.4
Cre10.g431450 Chlamydomonas reinhardtii HOM05D007091 ORTHO05D008768 6.9e-08 61.6 138 29.7


User provided reference genes

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