Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 1.1e-125 453.4 232 100.0
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 7.3e-74 281.2 237 63.7
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 1.2e-73 280.4 241 65.1
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 2.8e-73 279.3 237 61.2
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 1.8e-72 276.6 231 63.2
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 5.8e-71 271.6 217 63.1
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 5.8e-71 271.6 240 60.8
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 7.5e-71 271.2 210 65.7
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 7.5e-71 271.2 240 60.0
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 1.9e-69 266.5 235 60.9
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 1.9e-69 266.5 229 60.3
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 9.2e-69 264.2 192 66.1
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 8.6e-67 257.7 243 59.3
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 1.1e-64 250.8 213 62.4
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 6.8e-64 248.1 236 56.4
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 1.7e-62 243.4 211 61.1
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 2.2e-62 243.0 233 56.2
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 4.9e-62 241.9 234 57.3
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 1.4e-61 240.4 217 59.4
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 4.1e-61 238.8 205 61.5
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 7.1e-61 238.0 226 57.5
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 1.2e-60 237.3 237 56.1
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 2.7e-60 236.1 226 57.1
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 3.5e-60 235.7 235 54.0
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 4.6e-60 235.3 239 54.8
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 4.6e-60 235.3 226 56.6
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 7.8e-60 234.6 226 57.1
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.0e-59 234.2 226 57.1
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 1.7e-59 233.4 219 57.1
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 1.7e-59 233.4 227 57.3
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 2.3e-59 233.0 216 57.4
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 3.0e-59 232.6 232 55.2
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 3.9e-59 232.3 234 54.3
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 3.9e-59 232.3 225 60.0
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 5.1e-59 231.9 242 52.9
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 8.7e-59 231.1 236 54.7
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 8.7e-59 231.1 245 52.7
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 1.5e-58 230.3 245 55.1
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 1.9e-58 229.9 231 56.3
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 3.3e-58 229.2 210 57.1
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 9.6e-58 227.6 232 55.6
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 1.1e-56 224.2 212 58.5
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 1.4e-56 223.8 231 52.8
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 1.8e-56 223.4 216 55.1
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 2.4e-56 223.0 237 51.5
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 4.0e-56 222.2 244 51.6
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 5.2e-56 221.9 236 52.1
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 6.9e-56 221.5 183 66.1
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 1.2e-55 220.7 235 55.7
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 3.4e-55 219.2 227 53.7
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 4.4e-55 218.8 242 50.0
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 5.8e-55 218.4 246 51.2
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 7.6e-55 218.0 212 54.7
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 9.9e-55 217.6 209 55.5
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 2.9e-54 216.1 236 52.1
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 2.9e-54 216.1 217 53.5
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 2.9e-54 216.1 218 53.7
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 6.4e-54 214.9 237 51.5
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 6.4e-54 214.9 212 54.2
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 8.4e-54 214.5 231 52.4
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 8.4e-54 214.5 202 55.0
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 4.2e-53 212.2 220 55.9
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 5.4e-53 211.8 240 50.4
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 1.2e-52 210.7 239 51.5
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 1.2e-52 210.7 233 52.8
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 4.6e-52 208.8 244 48.4
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 1.0e-51 207.6 216 51.4
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 2.3e-51 206.5 241 50.2
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 5.1e-51 205.3 241 50.6
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 6.6e-51 204.9 214 52.8
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 1.1e-50 204.1 230 49.6
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 1.5e-50 203.8 236 49.6
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 1.5e-50 203.8 236 49.6
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 2.5e-50 203.0 225 50.7
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 3.3e-50 202.6 207 55.6
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 5.6e-50 201.8 234 49.1
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 7.3e-50 201.4 212 52.4
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.3e-49 200.7 223 50.2
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 1.6e-49 200.3 277 44.4
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 2.1e-49 199.9 228 49.1
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 3.6e-49 199.1 179 58.7
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 4.8e-49 198.7 275 43.6
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 2.4e-48 196.4 209 51.2
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 2.4e-48 196.4 206 51.5
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 4.0e-48 195.7 231 49.8
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 6.9e-48 194.9 260 45.8
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 6.9e-48 194.9 186 55.4
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 1.2e-47 194.1 233 45.5
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 1.2e-47 194.1 234 45.7
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 1.2e-47 194.1 212 48.6
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 1.5e-47 193.7 209 51.7
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 1.7e-46 190.3 220 49.1
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 3.8e-46 189.1 196 51.0
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 8.4e-46 188.0 223 50.2
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 1.9e-45 186.8 214 49.5
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 3.2e-45 186.0 219 48.9
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 3.2e-45 186.0 230 46.5
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 7.1e-45 184.9 213 49.8
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 9.3e-45 184.5 213 48.8
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 2.1e-44 183.3 209 49.3
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 2.1e-44 183.3 209 52.6
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 6.0e-44 181.8 190 51.1
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 7.9e-44 181.4 213 46.9
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 1.8e-43 180.3 191 51.8
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 1.8e-43 180.3 191 51.8
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 1.8e-43 180.3 191 51.8
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 3.0e-43 179.5 208 49.5
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 8.7e-43 177.9 191 51.3
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 6.9e-40 168.3 207 54.1
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 9.0e-40 167.9 215 47.4
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 1.7e-38 163.7 188 52.1
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 4.9e-38 162.2 124 62.9
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 1.1e-37 161.0 189 48.7
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 6.0e-36 155.2 183 47.5
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 6.0e-36 155.2 206 43.7
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 7.9e-36 154.8 167 52.7
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 1.5e-34 150.6 182 47.8
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 1.5e-34 150.6 182 47.8
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 4.3e-34 149.1 170 47.6
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 1.3e-33 147.5 165 47.9
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 1.3e-33 147.5 165 47.9
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 2.7e-28 129.8 221 41.6
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 5.1e-27 125.6 137 54.0
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 1.5e-23 114.0 223 39.0
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 1.6e-20 104.0 150 45.3
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 4.3e-18 95.9 104 55.8
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 6.5e-14 82.0 108 43.5
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 4.4e-10 69.3 180 32.2
Oeu016600.1 Olea europaea HOM05D006151 ORTHO05D007487 8.2e-09 65.1 64 54.7
AUR62044379 Chenopodium quinoa HOM05D006151 ORTHO05D007487 7.0e-08 62.0 209 28.7
AagrBONN_evm.TU.Sc2ySwM_295.7 Anthoceros agrestis HOM05D024008 ORTHO05D007487 2.6e-07 60.1 175 32.0
Pp3c15_7400 Physcomitrium patens HOM05D000098 ORTHO05D000523 2.6e-07 60.1 108 32.4


User provided reference genes

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