Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 0.0e+00 1293.9 650 100.0
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 5.8e-246 854.4 656 69.4
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 8.5e-229 797.3 642 66.7
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 7.0e-223 777.7 649 64.6
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 4.1e-215 751.9 654 63.5
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 9.1e-215 750.7 652 62.4
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 1.5e-204 716.8 671 60.1
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 5.5e-204 714.9 653 59.7
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 6.1e-203 711.4 650 60.5
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 5.7e-201 704.9 661 59.8
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 5.4e-199 698.4 654 58.9
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 1.6e-198 696.8 655 58.5
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 1.3e-197 693.7 648 59.3
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 1.3e-197 693.7 651 59.8
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 2.3e-197 693.0 641 58.0
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 2.5e-196 689.5 644 59.8
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 2.3e-194 682.9 662 58.0
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 8.9e-194 681.0 645 55.7
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 1.3e-192 677.2 645 57.2
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 2.2e-192 676.4 645 57.5
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 4.1e-191 672.2 517 65.4
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 9.2e-191 671.0 647 56.0
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 9.2e-191 671.0 643 57.7
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 7.8e-190 667.9 639 57.9
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 7.8e-190 667.9 643 58.0
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 1.0e-189 667.5 645 57.5
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 1.1e-188 664.1 644 56.7
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 2.5e-188 662.9 644 57.3
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 2.5e-188 662.9 680 54.7
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 3.1e-186 656.0 648 56.8
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 5.2e-186 655.2 660 57.1
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 7.5e-185 651.4 496 64.1
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 9.8e-185 651.0 476 67.0
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 9.8e-185 651.0 665 54.1
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 4.1e-183 645.6 652 55.2
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 1.0e-181 641.0 654 56.4
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 1.7e-181 640.2 653 55.1
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 3.9e-181 639.0 525 60.4
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 1.1e-180 637.5 654 56.0
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 1.1e-180 637.5 651 54.4
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 1.5e-180 637.1 656 55.0
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 1.9e-180 636.7 648 52.9
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 5.6e-180 635.2 657 52.7
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 9.5e-180 634.4 648 54.8
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 2.8e-179 632.9 654 55.2
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 3.6e-179 632.5 664 53.0
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 6.2e-179 631.7 661 53.1
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 1.1e-178 630.9 653 54.5
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 1.8e-178 630.2 681 52.6
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 4.0e-178 629.0 639 54.5
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 6.8e-178 628.2 676 52.1
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 8.9e-178 627.9 681 52.3
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 8.9e-178 627.9 653 52.7
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 8.9e-178 627.9 466 64.4
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 2.9e-176 622.9 615 56.3
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 4.9e-176 622.1 650 52.5
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 8.3e-176 621.3 656 52.7
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 1.1e-175 620.9 471 63.9
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 1.4e-175 620.5 660 52.0
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 1.9e-175 620.2 483 63.1
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 1.9e-175 620.2 673 53.0
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 1.6e-174 617.1 653 53.1
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 1.6e-174 617.1 421 70.8
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 3.5e-174 615.9 646 53.7
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 5.1e-173 612.1 496 62.7
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 6.6e-173 611.7 656 52.6
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 1.2e-171 607.4 645 53.3
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.6e-171 607.1 494 60.1
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.6e-171 607.1 494 60.1
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 1.6e-171 607.1 505 60.8
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 2.1e-171 606.7 645 51.6
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.6e-171 605.9 494 59.7
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.7e-171 605.5 494 59.7
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 8.1e-171 604.7 650 52.3
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 1.4e-170 604.0 476 61.1
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 5.2e-170 602.1 497 59.6
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 6.8e-170 601.7 489 60.5
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 6.8e-170 601.7 650 51.8
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 6.8e-170 601.7 650 51.8
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 6.8e-170 601.7 497 59.8
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 8.9e-170 601.3 490 60.2
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 1.2e-169 600.9 641 53.5
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 4.4e-169 599.0 491 60.1
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 2.9e-168 596.3 483 61.5
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.9e-168 595.5 494 59.3
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 3.2e-167 592.8 491 59.5
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 5.4e-167 592.0 480 59.4
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 2.7e-166 589.7 651 49.9
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 3.5e-166 589.3 491 59.7
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 1.3e-165 587.4 466 60.3
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 5.6e-164 582.0 487 58.3
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 2.8e-163 579.7 647 51.9
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 7.8e-158 561.6 671 48.1
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 8.7e-157 558.1 654 48.6
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 1.2e-155 554.3 471 60.1
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 4.0e-154 549.3 569 52.4
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-153 547.7 468 57.9
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 2.6e-153 546.6 391 68.5
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 6.0e-134 482.3 475 52.6
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 1.1e-132 478.0 351 68.1
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 8.2e-123 445.3 349 63.0
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 1.1e-119 434.9 488 47.7
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 7.9e-118 428.7 463 49.0
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 1.5e-116 424.5 493 45.4
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 5.3e-114 416.0 422 49.1
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 2.2e-104 384.0 507 43.2
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 3.8e-104 383.3 607 38.9
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 9.5e-79 298.9 676 30.9
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 3.4e-76 290.4 521 34.0
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 2.1e-57 228.0 548 30.5
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 3.3e-55 220.7 412 35.7
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 7.6e-52 209.5 494 30.2
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 1.1e-26 125.9 98 62.2
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 1.1e-26 125.9 98 62.2
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 6.0e-25 120.2 98 60.2
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.5e-15 89.0 380 22.6


User provided reference genes

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