Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.10815 Avicennia marina HOM05D011410 ORTHO05D013015 2.6e-87 325.5 181 100.0
SalBow3G0301 Salvia bowleyana HOM05D011410 ORTHO05D013015 2.3e-38 162.9 169 54.4
Migut.K00088 Erythranthe guttata HOM05D011410 ORTHO05D013015 4.7e-28 128.6 151 45.0
Nitab4.5_0002228g0040 Nicotiana tabacum HOM05D011410 ORTHO05D013015 6.2e-20 101.7 163 36.2
Peaxi162Scf00089g01410 Petunia axillaris HOM05D011410 ORTHO05D013015 3.9e-14 82.4 169 32.0
Nitab4.5_0000360g0070 Nicotiana tabacum HOM05D011410 ORTHO05D013015 2.4e-11 73.2 116 34.5
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 3.1e-11 72.8 170 31.8
QL06p013377 Quercus lobata HOM05D003146 ORTHO05D001819 5.2e-11 72.0 178 32.6
CAN.G111.34 Capsicum annuum HOM05D011410 ORTHO05D013015 8.9e-11 71.2 166 30.7
Nitab4.5_0000070g0260 Nicotiana tabacum HOM05D011410 ORTHO05D013015 8.9e-11 71.2 125 36.0
Rhsim04G0243800 Rhododendron simsii HOM05D031363 ORTHO05D013015 2.6e-10 69.7 150 33.3
Rhsim04G0243500 Rhododendron simsii HOM05D031363 ORTHO05D037310 4.4e-10 68.9 150 33.3
Migut.I00083 Erythranthe guttata HOM05D011410 ORTHO05D013015 7.6e-10 68.2 149 31.5
CAN.G111.37 Capsicum annuum HOM05D011410 ORTHO05D013015 9.9e-10 67.8 169 29.0
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 2.2e-09 66.6 151 35.1
CARHR037660 Cardamine hirsuta HOM05D003146 ORTHO05D001819 2.9e-09 66.2 164 31.1
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 2.9e-09 66.2 176 29.5
Solyc01g097660.2 Solanum lycopersicum HOM05D011410 ORTHO05D013015 3.8e-09 65.9 175 29.1
CAN.G111.35 Capsicum annuum HOM05D011410 ORTHO05D013015 8.4e-09 64.7 174 28.2
Sopen01g041270 Solanum pennellii HOM05D011410 ORTHO05D013015 8.4e-09 64.7 175 29.1
CAN.G111.41 Capsicum annuum HOM05D011410 ORTHO05D013015 1.4e-08 63.9 164 29.9
ClCG09G008860 Citrullus lanatus HOM05D003146 ORTHO05D001819 1.4e-08 63.9 174 29.3
Rhsim04G0235700 Rhododendron simsii HOM05D000862 ORTHO05D003588 1.9e-08 63.5 170 32.4
PGR004G2081 Punica granatum HOM05D003146 ORTHO05D001819 4.2e-08 62.4 173 28.9
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 7.1e-08 61.6 154 29.9
Sp1g35000 Schrenkiella parvula HOM05D003146 ORTHO05D001819 7.1e-08 61.6 164 30.5
Glyma.15G207000 Glycine max HOM05D007995 ORTHO05D001819 9.3e-08 61.2 165 29.1
Glyma.15G207100 Glycine max HOM05D007995 ORTHO05D001819 9.3e-08 61.2 165 29.1
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 9.3e-08 61.2 145 31.7
CAN.G363.37 Capsicum annuum HOM05D009438 ORTHO05D010870 1.2e-07 60.8 170 31.2
PGSC0003DMG400003833 Solanum tuberosum HOM05D003146 ORTHO05D001819 2.1e-07 60.1 145 27.6
AL1G54540 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 2.7e-07 59.7 164 30.5
PGSC0003DMG400009677 Solanum tuberosum HOM05D011410 ORTHO05D013015 2.7e-07 59.7 183 27.3
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.0e-07 58.5 169 25.4
Phvul.007G271600 Phaseolus vulgaris HOM05D007995 ORTHO05D001819 7.8e-07 58.2 162 29.0
TWI09G0175 Tripterygium wilfordii HOM05D003146 ORTHO05D001819 7.8e-07 58.2 140 32.9
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 1.0e-06 57.8 146 28.8
Migut.I00086 Erythranthe guttata HOM05D062370 ORTHO05D001819 1.0e-06 57.8 184 27.7
MELO3C035196.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.7e-06 57.0 157 28.7
Hma1.2p1_1096F.1_g256660 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 1.7e-06 57.0 136 33.8
VMungo0720G2167 Vigna mungo HOM05D007995 ORTHO05D001819 3.0e-06 56.2 145 33.8
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 3.9e-06 55.8 155 29.0
AL1G54590 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 6.6e-06 55.1 129 34.1
BcaB02g11337 Brassica carinata HOM05D003146 ORTHO05D001819 6.6e-06 55.1 164 28.0
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 6.6e-06 55.1 142 35.2
Migut.G01351 Erythranthe guttata HOM05D022792 ORTHO05D001819 8.7e-06 54.7 142 30.3
Solyc06g005460.1 Solanum lycopersicum HOM05D011410 ORTHO05D013015 8.7e-06 54.7 140 29.3
Sopen03g031260 Solanum pennellii HOM05D003146 ORTHO05D001819 8.7e-06 54.7 164 31.1
THA.LOC104803096 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 8.7e-06 54.7 165 26.7


User provided reference genes

Program Settings