Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.10792 Avicennia marina HOM05D002974 ORTHO05D002992 3.8e-79 298.1 153 100.0
MSTRG.26159 Avicennia marina HOM05D002974 ORTHO05D002992 9.8e-19 97.4 156 50.0
Oeu059346.1 Olea europaea HOM05D002974 ORTHO05D002992 7.8e-16 87.8 143 44.1
Cc06_g19310 Coffea canephora HOM05D002974 ORTHO05D002992 2.3e-15 86.3 131 44.3
Oeu029509.1 Olea europaea HOM05D002974 ORTHO05D002992 2.6e-11 72.8 157 36.9
PGSC0003DMG400008372 Solanum tuberosum HOM05D015198 ORTHO05D002992 2.6e-11 72.8 56 62.5
Solyc10g078440.2 Solanum lycopersicum HOM05D015198 ORTHO05D002992 3.8e-10 68.9 63 55.6
CSS0032574 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 8.4e-10 67.8 135 37.0
CSS0001226 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 1.1e-09 67.4 101 41.6
Phvul.001G123400 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 1.1e-09 67.4 142 36.6
Haze_20227 Corylus avellana HOM05D002974 ORTHO05D002992 1.4e-09 67.0 69 52.2
Cfa020005 Carpinus fangiana HOM05D002974 ORTHO05D002992 3.2e-09 65.9 162 35.2
SalBow1G0087 Salvia bowleyana HOM05D064831 ORTHO05D002992 3.2e-09 65.9 86 50.0
SalBow1G1187 Salvia bowleyana HOM05D064831 ORTHO05D002992 3.2e-09 65.9 86 50.0
CiPaw.09G047800 Carya illinoinensis HOM05D002974 ORTHO05D002992 4.1e-09 65.5 67 52.2
SalBow6G6653 Salvia bowleyana HOM05D002974 ORTHO05D002992 4.1e-09 65.5 84 53.6
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 5.4e-09 65.1 69 53.6
VMungo1383G0235 Vigna mungo HOM05D002974 ORTHO05D002992 9.2e-09 64.3 139 36.7
Actinidia01827 Actinidia chinensis HOM05D002974 ORTHO05D002992 1.2e-08 63.9 68 51.5
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 1.2e-08 63.9 131 38.9
Nitab4.5_0004588g0030 Nicotiana tabacum HOM05D015198 ORTHO05D002992 1.2e-08 63.9 56 55.4
SGA_v2.0_scaffold105G30292 Striga asiatica HOM05D002974 ORTHO05D002992 1.2e-08 63.9 63 57.1
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 2.1e-08 63.2 134 37.3
SGA_v2.0_scaffold105G30310 Striga asiatica HOM05D002974 ORTHO05D002992 3.5e-08 62.4 50 66.0
CANSAT64G2862 Cannabis sativa HOM05D002974 ORTHO05D002992 4.6e-08 62.0 49 67.3
ClCG10G016220 Citrullus lanatus HOM05D002974 ORTHO05D002992 6.0e-08 61.6 47 61.7
CsaV3_4G029660 Cucumis sativus L. HOM05D002974 ORTHO05D002992 7.8e-08 61.2 64 53.1
Lalb_Chr24g0400351 Lupinus albus HOM05D002974 ORTHO05D002992 1.0e-07 60.8 71 50.7
TWI53G1119 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 1.0e-07 60.8 41 70.7
Sabra16G0038800 Salix brachista HOM05D002974 ORTHO05D002992 1.3e-07 60.5 128 39.8
Sed0014788 Sechium edule HOM05D002974 ORTHO05D002992 1.3e-07 60.5 55 58.2
HPP92_028460 Vanilla planifolia HOM05D002974 ORTHO05D002992 1.3e-07 60.5 61 50.8
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 2.3e-07 59.7 63 46.0
CSS0033077 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 2.3e-07 59.7 135 37.0
MELO3C009755.2 Cucumis melo HOM05D002974 ORTHO05D002992 2.3e-07 59.7 70 50.0
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 3.0e-07 59.3 114 39.5
Lalb_Chr22g0357431 Lupinus albus HOM05D002974 ORTHO05D002992 3.0e-07 59.3 53 60.4
PSO384G2085 Papaver somniferum HOM05D002974 ORTHO05D002992 3.0e-07 59.3 56 58.9
Lj1g0016303 Lotus japonicus HOM05D002974 ORTHO05D002992 3.9e-07 58.9 51 60.8
Potri.006G038900 Populus trichocarpa HOM05D002974 ORTHO05D002992 3.9e-07 58.9 118 40.7
Glyma.03G127800 Glycine max HOM05D002974 ORTHO05D002992 5.1e-07 58.5 144 35.4
Potri.016G036600 Populus trichocarpa HOM05D002974 ORTHO05D002992 5.1e-07 58.5 128 38.3
Lalb_Chr06g0173671 Lupinus albus HOM05D002974 ORTHO05D002992 6.6e-07 58.2 56 55.4
Manes.09G004900 Manihot esculenta HOM05D002974 ORTHO05D002992 6.6e-07 58.2 67 52.2
Sed0004403 Sechium edule HOM05D002974 ORTHO05D002992 6.6e-07 58.2 64 46.9
FvH4_6g25410 Fragaria vesca HOM05D002974 ORTHO05D002992 8.6e-07 57.8 39 71.8
FAN05G2143 Fragaria x ananassa HOM05D002974 ORTHO05D002992 8.6e-07 57.8 39 71.8
Nitab4.5_0000812g0090 Nicotiana tabacum HOM05D015198 ORTHO05D002992 1.1e-06 57.4 80 43.8
Glyma.19G130400 Glycine max HOM05D002974 ORTHO05D002992 1.5e-06 57.0 141 35.5
Gohir.A11G307100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.5e-06 57.0 142 33.8
Peaxi162Scf00003g00491 Petunia axillaris HOM05D015198 ORTHO05D002992 1.5e-06 57.0 50 62.0
Cpa.g.sc5.168 Carica papaya HOM05D002974 ORTHO05D002992 1.9e-06 56.6 56 51.8
DCAR_013643 Daucus carota HOM05D002974 ORTHO05D002992 1.9e-06 56.6 47 63.8
Duzib128G1163 Durio zibethinus HOM05D002974 ORTHO05D002992 1.9e-06 56.6 115 36.5
PSO339G5722 Papaver somniferum HOM05D002974 ORTHO05D002992 1.9e-06 56.6 51 60.8
Cfa010941 Carpinus fangiana HOM05D002974 ORTHO05D002992 2.5e-06 56.2 72 44.4
ClCG04G004500 Citrullus lanatus HOM05D002974 ORTHO05D002992 2.5e-06 56.2 67 49.3
Potri.001G029700 Populus trichocarpa HOM05D002974 ORTHO05D002992 2.5e-06 56.2 141 32.6
Prupe.2G041200 Prunus persica HOM05D002974 ORTHO05D002992 2.5e-06 56.2 55 50.9
Prupe.7G038200 Prunus persica HOM05D002974 ORTHO05D002992 2.5e-06 56.2 45 64.4
RcHm_v2.0_Chr2g0125651 Rosa chinensis HOM05D002974 ORTHO05D002992 2.5e-06 56.2 48 60.4
CiPaw.13G015100 Carya illinoinensis HOM05D002974 ORTHO05D002992 3.3e-06 55.8 50 60.0
FAN02G0528 Fragaria x ananassa HOM05D002974 ORTHO05D002992 3.3e-06 55.8 39 69.2
arahy.Tifrunner.gnm1.ann1.C03B5F Arachis hypogaea HOM05D002974 ORTHO05D002992 4.3e-06 55.5 40 65.0
MELO3C019076.2 Cucumis melo HOM05D002974 ORTHO05D002992 4.3e-06 55.5 82 47.6
ECA248G1904 Erigeron canadensis HOM05D002974 ORTHO05D002992 5.6e-06 55.1 38 65.8
TPR.G8953 Trifolium pratense HOM05D002974 ORTHO05D002992 5.6e-06 55.1 131 35.1
FAN09G2803 Fragaria x ananassa HOM05D002974 ORTHO05D002992 7.3e-06 54.7 39 69.2
Psat3g078800 Pisum sativum HOM05D002974 ORTHO05D002992 7.3e-06 54.7 100 44.0
SHI49841 Sapria himalayana HOM05D048774 ORTHO05D002992 7.3e-06 54.7 53 54.7
SHI50452 Sapria himalayana HOM05D048774 ORTHO05D002992 7.3e-06 54.7 53 54.7
Sed0012008 Sechium edule HOM05D002974 ORTHO05D002992 7.3e-06 54.7 48 54.2
TAR633G1036 Trochodendron aralioides HOM05D002974 ORTHO05D002992 9.6e-06 54.3 136 35.3


User provided reference genes

Program Settings