Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 3.4e-228 794.7 401 100.0
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.6e-153 546.6 385 70.4
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.9e-146 523.1 404 68.3
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 5.2e-144 515.0 456 61.6
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 1.3e-142 510.4 385 69.1
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 1.0e-139 500.7 396 65.9
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 8.6e-139 497.7 384 65.9
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 7.3e-138 494.6 392 66.8
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 1.2e-137 493.8 394 66.8
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 1.2e-135 487.3 405 63.0
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 9.8e-135 484.2 391 65.2
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 2.2e-134 483.0 386 64.8
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 4.9e-134 481.9 392 64.5
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 9.2e-133 477.6 383 62.7
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 2.0e-132 476.5 392 63.3
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 2.0e-132 476.5 369 65.0
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 2.7e-132 476.1 380 64.5
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 2.7e-132 476.1 388 62.6
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 5.0e-131 471.9 385 63.1
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.1e-130 470.7 382 64.4
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 3.3e-130 469.2 382 64.1
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 5.6e-130 468.4 375 63.5
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 9.5e-130 467.6 392 62.5
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 3.6e-129 465.7 391 61.1
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 8.0e-129 464.5 389 60.7
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 1.4e-128 463.8 379 60.9
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.8e-128 463.4 382 64.1
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 2.3e-128 463.0 388 62.4
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 8.9e-128 461.1 409 60.4
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 1.5e-127 460.3 391 60.1
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 7.5e-127 458.0 396 62.1
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 6.4e-126 454.9 381 60.6
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 8.3e-126 454.5 356 63.8
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 2.4e-125 453.0 376 62.2
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 3.2e-125 452.6 387 61.2
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 5.4e-125 451.8 381 61.7
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 9.2e-125 451.1 393 59.0
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 1.2e-124 450.7 389 59.4
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.6e-124 450.3 384 62.0
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 6.0e-124 448.4 385 59.0
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 7.8e-124 448.0 387 61.2
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 3.0e-123 446.0 394 57.9
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 3.9e-123 445.7 383 61.1
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 5.0e-123 445.3 386 61.4
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 6.6e-123 444.9 383 61.4
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 8.6e-123 444.5 317 71.6
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 1.1e-122 444.1 386 60.4
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.1e-122 444.1 389 60.2
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 2.5e-122 443.0 394 57.1
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 2.5e-122 443.0 373 60.6
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 2.8e-121 439.5 394 56.9
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 3.6e-121 439.1 389 59.4
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 3.6e-121 439.1 391 58.8
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 8.1e-121 438.0 380 61.3
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 3.1e-120 436.0 385 57.1
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 8.9e-120 434.5 382 60.5
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 2.0e-119 433.3 384 59.9
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 2.6e-119 433.0 385 58.7
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 3.4e-119 432.6 405 58.0
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 2.4e-117 426.4 379 58.8
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 5.4e-117 425.2 386 58.8
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 7.1e-117 424.9 391 56.5
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 7.1e-117 424.9 381 58.5
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 6.0e-116 421.8 388 56.4
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 1.7e-115 420.2 342 62.0
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 2.3e-115 419.9 378 58.7
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 6.6e-115 418.3 381 57.7
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 1.1e-114 417.5 381 57.0
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 1.9e-114 416.8 392 57.9
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 2.5e-114 416.4 383 57.2
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 7.3e-114 414.8 381 57.0
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 2.1e-113 413.3 385 58.2
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 4.7e-113 412.1 385 56.6
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 6.2e-113 411.8 389 56.0
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 1.8e-112 410.2 297 67.3
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 1.8e-112 410.2 343 61.8
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 2.3e-112 409.8 345 60.3
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.1e-112 409.5 277 72.6
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 6.8e-112 408.3 343 61.8
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 1.2e-111 407.5 363 58.7
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 1.2e-111 407.5 388 54.9
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 1.5e-111 407.1 363 58.7
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 5.8e-111 405.2 363 58.4
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 1.2e-108 397.5 282 68.4
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 1.7e-107 393.7 297 65.3
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 1.7e-107 393.7 352 59.4
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.7e-100 369.8 381 53.3
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 6.0e-100 368.6 388 54.4
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 3.0e-99 366.3 344 57.3
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 2.5e-98 363.2 344 56.7
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 3.3e-98 362.8 272 66.2
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 5.6e-98 362.1 295 62.4
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 9.0e-96 354.8 244 70.5
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 1.3e-94 350.9 411 47.9
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 4.9e-94 349.0 297 65.3
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 7.9e-92 341.7 244 68.0
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.9e-91 339.3 253 69.2
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 6.7e-91 338.6 291 56.7
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 2.4e-88 330.1 314 55.4
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 1.2e-87 327.8 460 42.0
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.2e-86 323.6 179 84.4
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 2.4e-85 320.1 340 52.9
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 9.6e-82 308.1 347 47.3
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 1.3e-81 307.8 376 46.0
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 8.1e-81 305.1 177 80.8
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 3.0e-75 286.6 295 49.8
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 5.9e-55 219.2 225 50.7
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 1.8e-51 207.6 199 56.3
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 2.7e-44 183.7 331 36.3
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 7.5e-42 175.6 318 37.7
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.3e-41 174.9 146 58.2
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 2.9e-38 163.7 176 49.4
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 4.2e-37 159.8 140 56.4
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 4.2e-37 159.8 187 48.1
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 6.5e-30 136.0 71 90.1
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 8.3e-17 92.4 116 47.4
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 2.1e-12 77.8 48 70.8
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 3.7e-09 67.0 55 58.2
Nn2g16007 Nelumbo nucifera HOM05D006491 ORTHO05D008412 3.2e-08 63.9 71 52.1
Medtr4g025750 Medicago truncatula HOM05D006491 ORTHO05D008317 3.9e-06 57.0 70 45.7


User provided reference genes

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