Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 1.2e-59 233.0 118 100.0
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 5.6e-46 187.6 118 83.9
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 7.3e-46 187.2 115 84.3
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 1.6e-45 186.0 118 83.1
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 6.4e-42 174.1 118 78.8
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 4.3e-38 161.4 103 77.7
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 9.5e-38 160.2 103 76.7
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 9.5e-38 160.2 107 73.8
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 1.4e-36 156.4 110 70.9
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 1.4e-36 156.4 95 82.1
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.8e-36 156.0 103 75.7
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 6.8e-36 154.1 103 73.8
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 8.9e-36 153.7 102 73.5
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 1.2e-35 153.3 103 75.7
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 1.2e-35 153.3 103 75.7
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 1.5e-35 152.9 100 77.0
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 2.0e-35 152.5 100 77.0
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 2.6e-35 152.1 103 74.8
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 3.4e-35 151.8 103 71.8
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 7.6e-35 150.6 103 71.8
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 7.6e-35 150.6 103 75.7
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 7.6e-35 150.6 103 74.8
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 1.3e-34 149.8 103 74.8
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 1.3e-34 149.8 103 73.8
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 1.3e-34 149.8 103 74.8
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 1.3e-34 149.8 103 76.7
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 1.3e-34 149.8 103 75.7
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 1.7e-34 149.4 97 78.4
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 1.7e-34 149.4 103 73.8
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 1.7e-34 149.4 103 74.8
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 1.7e-34 149.4 103 73.8
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 2.2e-34 149.1 100 74.0
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 2.2e-34 149.1 101 75.2
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 4.9e-34 147.9 103 73.8
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 6.4e-34 147.5 103 76.7
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 1.1e-33 146.7 100 75.0
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 1.1e-33 146.7 103 73.8
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 1.1e-33 146.7 100 76.0
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 1.1e-33 146.7 102 71.6
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 1.4e-33 146.4 103 72.8
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 1.4e-33 146.4 103 73.8
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 1.4e-33 146.4 99 75.8
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 1.9e-33 146.0 103 71.8
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 2.4e-33 145.6 103 73.8
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 2.4e-33 145.6 103 73.8
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 3.2e-33 145.2 103 72.8
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 5.4e-33 144.4 91 78.0
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 7.1e-33 144.1 100 72.0
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 7.1e-33 144.1 103 71.8
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 7.1e-33 144.1 103 71.8
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 9.2e-33 143.7 100 75.0
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 1.2e-32 143.3 103 70.9
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 1.6e-32 142.9 103 70.9
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 1.6e-32 142.9 100 72.0
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 1.6e-32 142.9 100 72.0
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 2.1e-32 142.5 101 71.3
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 2.7e-32 142.1 102 72.5
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 4.6e-32 141.4 103 71.8
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 7.8e-32 140.6 100 70.0
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 1.0e-31 140.2 97 73.2
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 5.1e-31 137.9 98 70.4
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 5.1e-31 137.9 103 68.0
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 6.6e-31 137.5 101 70.3
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 8.6e-31 137.1 89 78.7
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 8.6e-31 137.1 92 75.0
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 8.6e-31 137.1 103 69.9
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 8.6e-31 137.1 129 62.0
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 2.5e-30 135.6 98 68.4
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 5.6e-30 134.4 92 73.9
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 1.2e-29 133.3 103 66.0
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 1.6e-29 132.9 89 75.3
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 2.1e-29 132.5 89 76.4
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 3.6e-29 131.7 89 73.0
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 6.2e-29 131.0 89 73.0
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 8.1e-29 130.6 89 71.9
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 1.1e-28 130.2 89 71.9
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 1.4e-28 129.8 89 71.9
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 8.9e-28 127.1 89 70.8
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 8.9e-28 127.1 89 70.8
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 8.9e-28 127.1 89 71.9
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 2.0e-27 125.9 92 68.5
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 4.4e-27 124.8 89 69.7
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 4.4e-27 124.8 89 69.7
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 4.4e-27 124.8 103 63.1
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 5.8e-27 124.4 89 68.5
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 7.6e-27 124.0 90 72.2
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 1.7e-26 122.9 89 68.5
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 2.2e-26 122.5 89 68.5
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 4.9e-26 121.3 89 66.3
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 6.4e-26 120.9 97 60.8
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 3.2e-25 118.6 74 81.1
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 5.4e-25 117.9 79 78.5
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 1.6e-24 116.3 86 73.3
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 4.6e-24 114.8 74 79.7
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 4.6e-24 114.8 74 81.1
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 1.0e-23 113.6 98 59.2
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 1.1e-22 110.2 89 66.3
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 1.5e-22 109.8 79 69.6
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 2.5e-22 109.0 90 64.4
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 2.5e-22 109.0 74 74.3
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 2.1e-21 105.9 74 71.6
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 3.6e-21 105.1 74 71.6
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 4.8e-21 104.8 74 71.6
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 5.3e-20 101.3 83 62.7
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 9.0e-20 100.5 91 64.8
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 2.0e-19 99.4 92 56.5
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 2.6e-19 99.0 73 68.5
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 2.7e-16 89.0 62 71.0
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 2.7e-16 89.0 99 55.6
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 2.3e-15 85.9 62 74.2
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 3.0e-15 85.5 84 52.4
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 4.3e-14 81.6 77 53.2
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 1.8e-12 76.3 88 48.9
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 1.5e-11 73.2 79 49.4
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 4.5e-11 71.6 51 68.6
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 9.9e-11 70.5 83 51.8
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 2.2e-10 69.3 62 62.9
MCO12G243 Micromonas commoda HOM05D006914 ORTHO05D008583 6.0e-08 61.2 110 37.3


User provided reference genes

Program Settings