Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 2.0e-58 228.8 107 100.0
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 1.1e-43 179.9 107 77.6
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 1.9e-40 169.1 103 71.8
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 2.7e-39 165.2 107 67.3
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 5.6e-37 157.5 101 66.3
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 1.6e-28 129.4 97 57.7
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.1e-27 126.7 92 59.8
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 1.4e-27 126.3 106 53.8
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 3.1e-27 125.2 97 56.7
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 6.9e-27 124.0 106 56.6
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 6.9e-27 124.0 97 56.7
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 6.9e-27 124.0 102 59.8
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 5.8e-26 120.9 103 53.4
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 7.6e-26 120.6 108 53.7
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 1.3e-25 119.8 103 52.4
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 4.9e-25 117.9 103 50.5
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 1.1e-24 116.7 102 53.9
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 1.4e-24 116.3 100 53.0
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 3.2e-24 115.2 100 52.0
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 4.2e-24 114.8 100 52.0
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 4.2e-24 114.8 100 50.0
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 5.4e-24 114.4 101 50.5
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 9.3e-24 113.6 101 53.5
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 1.2e-23 113.2 100 52.0
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 1.2e-23 113.2 104 52.9
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 1.6e-23 112.8 104 52.9
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 2.1e-23 112.5 79 60.8
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 2.1e-23 112.5 100 49.0
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 2.7e-23 112.1 98 54.1
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 2.7e-23 112.1 100 50.0
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 2.7e-23 112.1 100 50.0
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 3.5e-23 111.7 75 64.0
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 3.5e-23 111.7 100 50.0
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 3.5e-23 111.7 100 50.0
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 3.5e-23 111.7 104 51.9
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 6.0e-23 110.9 79 59.5
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 6.0e-23 110.9 79 60.8
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 6.0e-23 110.9 104 51.9
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 6.0e-23 110.9 70 65.7
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 7.9e-23 110.5 85 55.3
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 7.9e-23 110.5 100 55.0
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 7.9e-23 110.5 100 49.0
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 7.9e-23 110.5 95 51.6
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 1.0e-22 110.2 61 70.5
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.0e-22 110.2 105 54.3
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 1.0e-22 110.2 98 50.0
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.3e-22 109.8 96 50.0
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 1.3e-22 109.8 101 53.5
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 1.3e-22 109.8 100 52.0
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 1.3e-22 109.8 100 49.0
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 1.8e-22 109.4 99 51.5
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 1.8e-22 109.4 99 51.5
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 2.3e-22 109.0 61 67.2
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 2.3e-22 109.0 61 70.5
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 2.3e-22 109.0 61 70.5
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 2.3e-22 109.0 61 70.5
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 2.3e-22 109.0 89 52.8
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 3.0e-22 108.6 94 52.1
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 3.9e-22 108.2 91 52.7
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 5.1e-22 107.8 61 68.9
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 5.1e-22 107.8 87 59.8
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 5.1e-22 107.8 101 49.5
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 6.7e-22 107.5 97 50.5
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 8.7e-22 107.1 59 71.2
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 8.7e-22 107.1 101 49.5
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 1.1e-21 106.7 89 51.7
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 1.9e-21 105.9 61 68.9
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 1.9e-21 105.9 100 50.0
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 2.5e-21 105.5 61 70.5
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 3.3e-21 105.1 92 50.0
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 3.3e-21 105.1 90 48.9
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 5.6e-21 104.4 61 68.9
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 7.4e-21 104.0 100 47.0
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 2.1e-20 102.4 91 51.6
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 2.8e-20 102.1 81 53.1
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 3.7e-20 101.7 93 49.5
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 3.7e-20 101.7 89 51.7
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 6.2e-20 100.9 90 51.1
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 8.1e-20 100.5 89 51.7
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.4e-19 99.0 100 45.0
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 3.1e-19 98.6 60 66.7
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 3.1e-19 98.6 60 66.7
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 4.0e-19 98.2 105 46.7
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 6.9e-19 97.4 61 63.9
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 9.0e-19 97.1 102 44.1
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 5.8e-18 94.4 83 54.2
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 9.9e-18 93.6 117 42.7
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 2.2e-17 92.4 95 43.2
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.2e-17 92.4 67 56.7
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 3.8e-17 91.7 66 59.1
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 3.8e-17 91.7 66 59.1
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 6.4e-17 90.9 100 45.0
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 8.4e-17 90.5 103 43.7
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 8.4e-17 90.5 97 48.5
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 1.1e-16 90.1 54 66.7
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 2.4e-16 89.0 108 41.7
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 3.2e-16 88.6 91 44.0
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 9.3e-16 87.0 89 44.9
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 4.6e-15 84.7 85 47.1
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 4.6e-15 84.7 46 67.4
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 7.9e-15 84.0 87 47.1
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 1.0e-14 83.6 100 39.0
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 1.0e-14 83.6 100 39.0
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 6.7e-14 80.9 119 37.8
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 1.9e-13 79.3 87 46.0
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 2.5e-13 79.0 83 43.4
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 4.8e-12 74.7 58 53.4
MCO14G029 Micromonas commoda HOM05D007077 ORTHO05D008853 4.0e-11 71.6 107 38.3
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 4.2e-08 61.6 95 34.7
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 3.5e-07 58.5 89 36.0


User provided reference genes

Program Settings