Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 1.6e-91 339.3 161 100.0
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 5.8e-78 294.3 158 86.7
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 4.6e-75 284.6 161 82.6
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 1.0e-74 283.5 161 80.7
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 1.7e-74 282.7 161 80.7
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 3.0e-74 282.0 158 82.3
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 5.1e-74 281.2 161 82.0
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 6.6e-74 280.8 161 80.7
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.5e-73 279.6 158 79.7
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 1.9e-73 279.3 161 80.1
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.5e-73 278.9 158 80.4
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 3.3e-73 278.5 158 80.4
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 4.3e-73 278.1 161 80.1
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 7.3e-73 277.3 158 81.6
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.2e-72 276.6 157 82.2
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.2e-72 276.6 161 79.5
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 1.6e-72 276.2 160 80.6
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.6e-72 276.2 160 80.6
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.6e-72 276.2 160 80.6
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.1e-72 275.8 158 80.4
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 2.1e-72 275.8 161 78.3
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 2.8e-72 275.4 157 80.3
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.8e-72 275.4 158 80.4
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 3.6e-72 275.0 160 78.1
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 6.2e-72 274.2 158 78.5
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 8.1e-72 273.9 161 78.3
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 1.4e-71 273.1 161 78.3
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.4e-71 272.3 154 81.8
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 2.4e-71 272.3 161 78.3
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 2.4e-71 272.3 152 80.9
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 3.1e-71 271.9 161 78.9
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 3.1e-71 271.9 161 78.9
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 6.8e-71 270.8 151 83.4
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 6.8e-71 270.8 161 78.9
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 8.9e-71 270.4 161 77.0
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 8.9e-71 270.4 160 80.0
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 1.2e-70 270.0 160 77.5
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.2e-70 270.0 157 80.3
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 1.2e-70 270.0 157 80.3
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 1.2e-70 270.0 161 75.8
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 1.5e-70 269.6 161 75.8
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 1.5e-70 269.6 161 75.8
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 1.5e-70 269.6 161 75.8
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 1.5e-70 269.6 161 77.0
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 2.0e-70 269.2 161 75.8
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 2.0e-70 269.2 155 78.7
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 2.6e-70 268.9 161 77.6
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 2.6e-70 268.9 161 75.2
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 3.4e-70 268.5 161 75.2
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 3.4e-70 268.5 152 80.9
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 4.4e-70 268.1 157 79.6
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 4.4e-70 268.1 162 77.2
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 5.8e-70 267.7 161 77.6
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 7.6e-70 267.3 161 75.2
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 9.9e-70 266.9 161 76.4
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 9.9e-70 266.9 160 75.0
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 9.9e-70 266.9 154 78.6
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 1.3e-69 266.5 161 74.5
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.3e-69 266.5 161 75.2
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 1.3e-69 266.5 161 76.4
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 1.3e-69 266.5 161 76.4
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.3e-69 266.5 161 78.3
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 1.3e-69 266.5 160 76.2
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 1.3e-69 266.5 162 77.2
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 1.7e-69 266.2 161 75.2
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 1.7e-69 266.2 162 77.8
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 2.2e-69 265.8 161 76.4
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 2.9e-69 265.4 161 75.2
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.9e-69 265.4 161 74.5
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 3.8e-69 265.0 161 77.0
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 3.8e-69 265.0 161 77.0
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 4.9e-69 264.6 161 74.5
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 4.9e-69 264.6 161 76.4
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 6.4e-69 264.2 159 76.1
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 8.4e-69 263.8 155 76.8
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 8.4e-69 263.8 155 77.4
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 1.1e-68 263.5 161 73.9
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 1.9e-68 262.7 154 77.9
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 1.9e-68 262.7 160 75.0
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 1.9e-68 262.7 157 78.3
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 2.4e-68 262.3 169 72.2
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 3.2e-68 261.9 161 75.2
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 4.1e-68 261.5 156 78.2
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 5.4e-68 261.2 161 77.0
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 5.4e-68 261.2 157 77.7
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 9.2e-68 260.4 166 72.3
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 9.2e-68 260.4 162 74.7
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 1.2e-67 260.0 154 77.3
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 2.7e-67 258.8 162 74.7
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 6.0e-67 257.7 145 82.1
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 7.8e-67 257.3 138 85.5
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 1.3e-66 256.5 148 77.0
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 4.3e-65 251.5 214 58.9
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 8.1e-64 247.3 156 75.6
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 1.4e-63 246.5 140 80.7
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 1.2e-62 243.4 161 73.9
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 2.2e-61 239.2 161 70.8
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 2.9e-61 238.8 157 69.4
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 3.2e-60 235.3 137 77.4
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 7.1e-60 234.2 135 78.5
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 1.2e-59 233.4 135 78.5
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 6.0e-59 231.1 116 91.4
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 1.9e-57 226.1 138 75.4
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.5e-54 216.5 117 84.6
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 1.7e-53 213.0 142 64.8
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 2.9e-53 212.2 152 67.8
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 3.2e-52 208.8 114 82.5
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 5.4e-52 208.0 116 80.2
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 2.1e-51 206.1 142 63.4
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 3.9e-50 201.8 140 62.9
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 1.1e-49 200.3 115 80.9
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 9.6e-49 197.2 116 76.7
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 6.2e-48 194.5 157 63.1
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 1.4e-47 193.4 183 55.2
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 1.2e-46 190.3 114 74.6
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 3.4e-46 188.7 102 85.3
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 3.2e-44 182.2 138 63.8
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 4.2e-44 181.8 96 82.3
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 4.6e-43 178.3 95 83.2
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 3.1e-39 165.6 102 71.6
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 1.0e-37 160.6 171 48.5
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 2.7e-35 152.5 157 53.5
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 2.8e-32 142.5 135 56.3
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 3.7e-32 142.1 85 80.0
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 1.5e-30 136.7 86 74.4
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 7.9e-27 124.4 73 78.1
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 6.1e-19 98.2 52 80.8
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 3.1e-15 85.9 60 66.7
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 1.4e-07 60.5 71 45.1


User provided reference genes

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