Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 5.0e-169 597.8 330 100.0
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 6.6e-145 517.7 330 75.5
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 5.2e-142 508.1 330 85.5
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 5.2e-142 508.1 330 85.2
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 1.3e-140 503.4 324 76.5
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 6.4e-140 501.1 324 75.0
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 9.2e-139 497.3 323 71.8
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 2.1e-138 496.1 324 83.0
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 2.7e-138 495.7 324 84.3
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 3.5e-138 495.4 327 75.2
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 1.7e-137 493.0 329 71.1
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 1.1e-136 490.3 320 71.9
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 3.3e-136 488.8 326 70.9
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 4.3e-136 488.4 325 70.8
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 2.1e-135 486.1 325 71.4
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 2.1e-135 486.1 325 70.5
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 8.9e-134 480.7 322 70.2
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 8.9e-134 480.7 328 73.5
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 2.0e-133 479.6 324 69.8
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 3.4e-133 478.8 325 69.5
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 4.4e-133 478.4 325 81.2
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 7.5e-133 477.6 326 68.7
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 1.7e-132 476.5 324 81.5
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 2.9e-132 475.7 325 80.0
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 2.9e-132 475.7 322 82.6
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 3.7e-132 475.3 325 70.8
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 3.7e-132 475.3 323 81.7
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 4.9e-132 474.9 327 68.8
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 4.9e-132 474.9 325 80.9
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 8.3e-132 474.2 328 80.5
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 1.4e-131 473.4 330 80.0
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 2.4e-131 472.6 327 80.1
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 2.4e-131 472.6 324 79.9
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 5.4e-131 471.5 327 80.4
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 7.1e-131 471.1 325 80.3
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 9.2e-131 470.7 328 80.2
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 9.2e-131 470.7 327 68.5
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 1.6e-130 469.9 326 79.8
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 2.1e-130 469.5 326 68.1
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 2.7e-130 469.2 326 77.6
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 4.6e-130 468.4 330 67.6
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 6.0e-130 468.0 326 69.0
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 6.0e-130 468.0 328 79.6
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 7.8e-130 467.6 328 79.9
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 2.3e-129 466.1 328 79.3
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 3.9e-129 465.3 328 79.3
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 3.9e-129 465.3 330 79.4
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 5.1e-129 464.9 324 80.2
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 5.1e-129 464.9 325 79.4
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 5.1e-129 464.9 326 78.8
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 2.5e-128 462.6 330 78.2
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 2.5e-128 462.6 330 78.2
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 2.5e-128 462.6 324 79.3
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 1.6e-127 459.9 325 79.1
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 2.1e-127 459.5 330 79.1
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 3.6e-127 458.8 329 78.4
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 3.6e-127 458.8 330 71.5
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 4.7e-127 458.4 245 84.1
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 6.2e-127 458.0 326 67.8
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 6.2e-127 458.0 324 78.4
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 1.1e-126 457.2 326 80.1
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 4.0e-126 455.3 324 78.1
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 1.2e-125 453.8 245 82.4
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 1.5e-125 453.4 330 79.1
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 2.0e-125 453.0 245 83.3
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 3.4e-125 452.2 370 70.8
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 7.6e-125 451.1 328 65.5
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 9.9e-125 450.7 324 77.5
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 4.9e-124 448.4 324 77.2
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 8.4e-124 447.6 324 77.2
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 2.4e-123 446.0 324 71.3
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 1.0e-121 440.7 328 72.0
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 4.3e-120 435.3 317 64.0
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 4.3e-120 435.3 330 74.5
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 7.3e-120 434.5 325 69.2
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 1.3e-119 433.7 325 63.4
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 2.8e-119 432.6 317 64.0
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 1.4e-118 430.3 327 74.9
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 2.4e-118 429.5 325 62.8
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 3.1e-118 429.1 325 62.8
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 4.0e-118 428.7 324 73.5
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 5.3e-118 428.3 328 72.6
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 6.9e-118 427.9 323 63.8
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 9.0e-118 427.6 328 72.6
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 2.0e-117 426.4 325 62.5
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 3.8e-116 422.2 329 72.6
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 4.9e-116 421.8 237 79.7
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 6.4e-116 421.4 334 72.8
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 3.2e-115 419.1 325 74.2
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 3.2e-115 419.1 327 62.1
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 7.1e-115 417.9 322 72.0
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 1.6e-114 416.8 317 74.8
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 3.1e-110 402.5 335 60.3
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 2.6e-109 399.4 240 74.2
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 2.5e-104 382.9 325 55.4
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 3.3e-104 382.5 311 72.3
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 3.7e-103 379.0 330 70.0
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 4.9e-100 368.6 258 68.6
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 9.3e-99 364.4 328 65.5
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 1.3e-97 360.5 330 65.2
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 9.0e-94 347.8 263 78.7
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 1.0e-92 344.4 258 80.2
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 2.5e-91 339.7 279 76.0
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.0e-89 334.3 248 66.5
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 4.2e-83 312.4 255 76.5
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 5.1e-73 278.9 376 40.2
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 6.7e-73 278.5 253 71.1
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 1.2e-66 257.7 251 66.5
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 2.3e-65 253.4 328 47.0
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 3.0e-65 253.1 230 55.7
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 1.7e-60 237.3 191 60.7
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 2.1e-58 230.3 138 75.4
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 1.4e-57 227.6 189 56.1
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 4.2e-51 206.1 126 73.8
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 5.2e-49 199.1 124 71.0
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 4.7e-42 176.0 94 81.9
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 2.1e-18 97.4 87 60.9
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 7.6e-16 89.0 82 50.0
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-09 68.2 156 32.7
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 6.4e-07 59.3 41 68.3
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 1.4e-06 58.2 50 58.0
MELO3C023799.2 Cucumis melo HOM05D006600 ORTHO05D168989 3.2e-06 57.0 43 65.1


User provided reference genes

Program Settings