Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 1.6e-126 456.1 224 100.0
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 1.1e-87 327.0 224 73.7
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 9.2e-82 307.4 227 71.8
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 1.2e-81 307.0 222 70.3
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 4.0e-77 292.0 217 69.1
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 7.5e-76 287.7 194 71.1
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 2.2e-75 286.2 216 68.5
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 3.7e-75 285.4 228 66.2
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 6.4e-75 284.6 227 65.6
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 9.2e-74 280.8 235 63.8
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 9.2e-74 280.8 188 72.9
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 9.2e-74 280.8 222 66.2
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 1.3e-72 276.9 215 66.5
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 2.3e-72 276.2 225 64.9
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 5.0e-72 275.0 176 74.4
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 8.6e-72 274.2 228 64.5
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 8.6e-72 274.2 193 70.5
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 1.5e-71 273.5 188 71.8
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 1.9e-71 273.1 215 65.1
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 3.3e-71 272.3 190 70.0
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 3.3e-71 272.3 177 74.0
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 3.3e-71 272.3 183 70.5
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 4.3e-71 271.9 209 65.1
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 4.3e-71 271.9 236 61.9
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 5.6e-71 271.6 184 71.2
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 1.2e-70 270.4 166 75.9
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 1.2e-70 270.4 183 69.9
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 1.6e-70 270.0 176 73.9
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 1.6e-70 270.0 176 73.9
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 3.6e-70 268.9 213 64.8
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 6.2e-70 268.1 166 74.7
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 1.1e-69 267.3 230 60.4
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 1.1e-69 267.3 183 69.4
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 1.8e-69 266.5 180 68.9
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 2.3e-69 266.2 180 68.3
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 3.1e-69 265.8 174 72.4
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 4.0e-69 265.4 172 73.8
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 4.0e-69 265.4 172 73.3
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 4.0e-69 265.4 172 73.3
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 5.2e-69 265.0 177 71.2
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 5.2e-69 265.0 182 70.3
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 5.2e-69 265.0 165 75.8
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 6.8e-69 264.6 241 61.0
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 6.8e-69 264.6 172 73.3
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 8.9e-69 264.2 180 67.8
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 1.5e-68 263.5 190 70.0
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 2.0e-68 263.1 229 62.4
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 3.4e-68 262.3 177 70.1
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 4.4e-68 261.9 195 67.2
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 9.8e-68 260.8 219 62.6
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 9.8e-68 260.8 214 64.0
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 2.2e-67 259.6 165 75.2
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 2.9e-67 259.2 177 70.1
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 3.7e-67 258.8 185 71.9
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 3.7e-67 258.8 185 67.0
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 3.7e-67 258.8 183 71.6
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.1e-66 257.3 182 65.9
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 1.1e-66 257.3 166 72.9
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 1.4e-66 256.9 208 63.5
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 1.4e-66 256.9 219 59.4
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 4.1e-66 255.4 175 71.4
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 4.1e-66 255.4 227 59.9
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 1.2e-65 253.8 263 55.1
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 1.6e-65 253.4 227 59.5
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 7.8e-65 251.1 165 70.9
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 2.3e-64 249.6 184 66.8
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 2.3e-64 249.6 212 60.4
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 5.1e-64 248.4 227 58.6
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 7.3e-63 244.6 227 58.6
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 1.2e-62 243.8 278 52.5
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 2.8e-62 242.7 179 65.9
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 1.1e-61 240.7 175 67.4
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.1e-61 240.7 227 57.7
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 1.4e-61 240.4 148 75.0
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 1.4e-61 240.4 169 67.5
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 1.8e-61 240.0 193 65.3
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 3.1e-61 239.2 223 57.0
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 8.9e-61 237.7 219 58.0
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 1.7e-59 233.4 165 67.9
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 2.9e-59 232.6 169 69.2
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 4.9e-59 231.9 146 76.0
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 3.2e-58 229.2 140 75.0
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 6.0e-57 224.9 143 75.5
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 3.0e-56 222.6 139 70.5
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 6.6e-56 221.5 267 47.9
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 9.6e-55 217.6 173 64.7
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 1.4e-53 213.8 147 67.3
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 4.4e-52 208.8 200 58.5
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 2.9e-51 206.1 155 64.5
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 3.0e-48 196.1 122 74.6
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 7.3e-47 191.4 122 73.0
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 3.1e-45 186.0 122 71.3
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 2.6e-44 183.0 122 68.9
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 4.6e-41 172.2 181 46.4
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 6.0e-41 171.8 185 48.6
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 7.9e-41 171.4 109 71.6
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 6.9e-29 131.7 78 78.2
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 1.6e-25 120.6 74 73.0
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 7.4e-23 111.7 240 31.7
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.7e-11 73.9 117 45.3
CSS0027054 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 3.0e-08 63.2 62 56.5
CSS0032451 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 6.7e-08 62.0 47 70.2
CSS0044668 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 1.3e-06 57.8 47 66.0
Cfa026866 Carpinus fangiana HOM05D007539 ORTHO05D125569 2.8e-06 56.6 91 31.9


User provided reference genes

Program Settings