Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.10326 Avicennia marina HOM05D007148 ORTHO05D009047 3.0e-185 651.7 342 100.0
Oeu053686.1 Olea europaea HOM05D007148 ORTHO05D009047 2.1e-53 213.8 332 47.0
SalBow3G0477 Salvia bowleyana HOM05D007148 ORTHO05D009047 3.6e-53 213.0 341 48.4
Nitab4.5_0008624g0020 Nicotiana tabacum HOM05D007148 ORTHO05D009047 1.5e-43 181.0 343 41.1
Sopen09g003080 Solanum pennellii HOM05D007148 ORTHO05D009047 5.0e-39 166.0 347 40.1
Cc06_g04310 Coffea canephora HOM05D007148 ORTHO05D009047 6.6e-39 165.6 333 39.9
Migut.J00650 Erythranthe guttata HOM05D007148 ORTHO05D009047 1.9e-38 164.1 327 39.4
Dinv35791 Davidia involucrata HOM05D007148 ORTHO05D009047 2.8e-37 160.2 341 39.6
Solyc09g008260.3 Solanum lycopersicum HOM05D007148 ORTHO05D009047 1.1e-36 158.3 348 39.9
Actinidia31326 Actinidia chinensis HOM05D007148 ORTHO05D009047 2.2e-34 150.6 338 39.3
TAR633G2546 Trochodendron aralioides HOM05D007148 ORTHO05D009047 1.4e-33 147.9 307 38.4
GSVIVG01033649001 Vitis vinifera HOM05D007148 ORTHO05D009047 7.0e-33 145.6 340 37.9
Nn6g35277 Nelumbo nucifera HOM05D007148 ORTHO05D009047 4.6e-32 142.9 288 41.0
HanXRQChr13g0400991 Helianthus annuus HOM05D007148 ORTHO05D009047 6.0e-32 142.5 339 37.2
CAN.G900.26 Capsicum annuum HOM05D007148 ORTHO05D009047 4.3e-30 136.3 300 38.3
Duzib128G0502 Durio zibethinus HOM05D007148 ORTHO05D009047 1.4e-28 131.3 397 31.7
Rhsim04G0143400 Rhododendron simsii HOM05D007148 ORTHO05D009047 1.4e-28 131.3 221 42.1
Gohir.A01G213200 Gossypium hirsutum HOM05D007148 ORTHO05D009047 5.2e-28 129.4 396 34.1
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 1.2e-27 128.3 309 35.9
Hund20337 Selenicereus undatus HOM05D007148 ORTHO05D009047 5.8e-27 125.9 411 33.6
COL.COLO4_26948 Corchorus olitorius HOM05D007148 ORTHO05D009047 1.7e-26 124.4 384 34.1
ECA233G5868 Erigeron canadensis HOM05D007148 ORTHO05D009047 4.9e-26 122.9 301 35.2
Peaxi162Scf00847g00313 Petunia axillaris HOM05D007148 ORTHO05D009047 4.9e-26 122.9 365 34.2
Gohir.D01G204200 Gossypium hirsutum HOM05D007148 ORTHO05D009047 1.4e-25 121.3 404 32.7
Manes.08G011400 Manihot esculenta HOM05D007148 ORTHO05D009047 1.9e-25 120.9 422 30.6
Gorai.002G246600 Gossypium raimondii HOM05D007148 ORTHO05D009047 5.4e-25 119.4 403 33.0
Rhsim04G0144100 Rhododendron simsii HOM05D007148 ORTHO05D009047 1.2e-24 118.2 288 38.5
PGSC0003DMG401003864 Solanum tuberosum HOM05D007148 ORTHO05D009047 4.6e-24 116.3 261 40.2
DCAR_014515 Daucus carota HOM05D007148 ORTHO05D009047 1.3e-23 114.8 343 32.1
Thecc.05G068300 Theobroma cacao HOM05D007148 ORTHO05D009047 3.0e-23 113.6 383 31.3
Prupe.7G128700 Prunus persica HOM05D007148 ORTHO05D009047 6.6e-23 112.5 466 30.3
CiPaw.09G171600 Carya illinoinensis HOM05D007148 ORTHO05D009047 8.6e-23 112.1 476 27.7
Sc20g0005580 Simmondsia chinensis HOM05D007148 ORTHO05D009047 8.6e-23 112.1 323 32.2
Ca_11512_v3 Cicer arietinum L. HOM05D000261 ORTHO05D009047 1.1e-22 111.7 353 33.1
Duzib093G0361 Durio zibethinus HOM05D007148 ORTHO05D009047 4.7e-21 106.3 399 30.3
Lsat_1_v5_gn_6_24961 Lactuca sativa HOM05D007148 ORTHO05D009047 4.7e-21 106.3 329 31.6
Thhalv10013433m.g Eutrema salsugineum HOM05D007148 ORTHO05D009047 6.2e-21 105.9 362 29.0
Ah.08g211560 Amaranthus hybridus HOM05D007148 ORTHO05D009047 1.2e-19 101.7 297 32.7
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 2.0e-19 100.9 299 32.4
Sed0015836 Sechium edule HOM05D007148 ORTHO05D009047 2.6e-19 100.5 121 47.1
QL07p043079 Quercus lobata HOM05D007148 ORTHO05D009047 3.4e-19 100.1 226 35.8
CSS0013124 Camellia sinensis var. sinensis HOM05D007148 ORTHO05D009047 5.8e-19 99.4 258 36.0
CsaV3_6G039960 Cucumis sativus L. HOM05D007148 ORTHO05D009047 7.6e-19 99.0 530 26.8
ATR1126G054 Amborella trichopoda HOM05D007148 ORTHO05D009047 9.9e-19 98.6 313 32.3
Aqoxy2G01740 Aquilegia oxysepala HOM05D007148 ORTHO05D009047 1.7e-18 97.8 297 30.3
MBI19_g45279_MAGBIO Magnolia biondii HOM05D007148 ORTHO05D009047 2.2e-18 97.4 298 30.5
Glyma.13G141800 Glycine max HOM05D007148 ORTHO05D009047 3.8e-18 96.7 165 41.8
ClCG04G009380 Citrullus lanatus HOM05D007148 ORTHO05D009047 1.1e-17 95.1 219 34.7
Eucgr.A01669 Eucalyptus grandis HOM05D007148 ORTHO05D009047 1.4e-17 94.7 390 29.0
AL6G12750 Arabidopsis lyrata HOM05D007148 ORTHO05D009047 1.9e-17 94.4 273 32.2
MELO3C024473.2 Cucumis melo HOM05D007148 ORTHO05D009047 3.2e-17 93.6 257 33.1
Lalb_Chr02g0155781 Lupinus albus HOM05D007148 ORTHO05D009047 3.2e-17 93.6 212 33.0
AUR62026914 Chenopodium quinoa HOM05D007148 ORTHO05D009047 4.2e-17 93.2 241 31.1
MD12G1110100 Malus domestica HOM05D007148 ORTHO05D009047 7.1e-17 92.4 190 37.4
PGR004G2178 Punica granatum HOM05D007148 ORTHO05D009047 1.2e-16 91.7 395 27.1
Atru.chr8.1790 Acer truncatum HOM05D007148 ORTHO05D009047 2.1e-16 90.9 198 35.4
RcHm_v2.0_Chr3g0470391 Rosa chinensis HOM05D007148 ORTHO05D009047 1.0e-15 88.6 185 36.8
CARHR209920 Cardamine hirsuta HOM05D007148 ORTHO05D009047 1.3e-15 88.2 184 37.0
Glyma.10G054600 Glycine max HOM05D007148 ORTHO05D009047 5.1e-15 86.3 422 27.3
MD04G1092300 Malus domestica HOM05D007148 ORTHO05D009047 5.1e-15 86.3 215 33.5
Carub.0006s0223 Capsella rubella HOM05D007148 ORTHO05D009047 6.6e-15 85.9 289 30.1
arahy.Tifrunner.gnm1.ann1.IRYX6E Arachis hypogaea HOM05D007148 ORTHO05D009047 8.7e-15 85.5 188 33.5
CANSAT80G0842 Cannabis sativa HOM05D007148 ORTHO05D009047 1.1e-14 85.1 117 45.3
Psat6g073400 Pisum sativum HOM05D007148 ORTHO05D009047 1.5e-14 84.7 371 27.2
Nitab4.5_0000578g0130 Nicotiana tabacum HOM05D007148 ORTHO05D009047 1.9e-14 84.3 254 36.2
Potri.006G123300 Populus trichocarpa HOM05D007148 ORTHO05D009047 2.5e-14 84.0 490 25.5
AT5G03420 Arabidopsis thaliana HOM05D007148 ORTHO05D009047 3.3e-14 83.6 257 33.1
VMungo0720G1794 Vigna mungo HOM05D007148 ORTHO05D009047 3.3e-14 83.6 159 37.7
FAN05G5619 Fragaria x ananassa HOM05D007148 ORTHO05D009047 4.3e-14 83.2 419 27.7
arahy.Tifrunner.gnm1.ann1.J3RTVJ Arachis hypogaea HOM05D007148 ORTHO05D009047 5.6e-14 82.8 416 25.5
FAN05G4699 Fragaria x ananassa HOM05D007148 ORTHO05D009047 5.6e-14 82.8 410 27.8
FvH4_6g16490 Fragaria vesca HOM05D007148 ORTHO05D009047 7.3e-14 82.4 420 27.1
FAN14G3336 Fragaria x ananassa HOM05D007148 ORTHO05D009047 7.3e-14 82.4 420 27.6
FAN09G1323 Fragaria x ananassa HOM05D007148 ORTHO05D009047 9.6e-14 82.0 465 26.2
Phvul.007G147800 Phaseolus vulgaris HOM05D007148 ORTHO05D009047 9.6e-14 82.0 513 24.0
BcaC06g32057 Brassica carinata HOM05D002509 ORTHO05D002758 1.6e-13 81.3 269 30.9
BraA10t45294Z Brassica rapa HOM05D002509 ORTHO05D002758 1.6e-13 81.3 201 33.3
Sabra06G0097500 Salix brachista HOM05D001037 ORTHO05D000888 1.6e-13 81.3 489 25.2
THA.LOC104816351 Tarenaya hassleriana HOM05D007148 ORTHO05D009047 1.6e-13 81.3 67 58.2
PSO801G0196 Papaver somniferum HOM05D007148 ORTHO05D009047 2.8e-13 80.5 117 41.0
TPR.G11276 Trifolium pratense HOM05D007148 ORTHO05D009047 3.6e-13 80.1 148 36.5
A10p32590 Brassica napus HOM05D002509 ORTHO05D002758 4.7e-13 79.7 202 32.7
FAN02G0401 Fragaria x ananassa HOM05D007148 ORTHO05D009047 4.7e-13 79.7 192 34.9
CSS0045155 Camellia sinensis var. sinensis HOM05D007148 ORTHO05D009047 8.1e-13 79.0 99 48.5
CANSAT80G2677 Cannabis sativa HOM05D007148 ORTHO05D009047 1.1e-12 78.6 470 25.5
Sp6g39320 Schrenkiella parvula HOM05D007148 ORTHO05D009047 1.4e-12 78.2 210 33.3
THA.LOC104826916 Tarenaya hassleriana HOM05D007148 ORTHO05D009047 1.4e-12 78.2 138 36.2
BcaC06g32060 Brassica carinata HOM05D007148 ORTHO05D009047 1.8e-12 77.8 332 28.9
PSO339G4391 Papaver somniferum HOM05D007148 ORTHO05D009047 2.4e-12 77.4 124 31.5
TWI74G0491 Tripterygium wilfordii HOM05D007148 ORTHO05D009047 3.1e-12 77.0 290 29.0
BolC9t60075H Brassica oleracea HOM05D002509 ORTHO05D002758 9.0e-12 75.5 335 28.7
Lj5g0011331 Lotus japonicus HOM05D007148 ORTHO05D009047 1.2e-11 75.1 234 32.1
Medtr1g063080 Medicago truncatula HOM05D007148 ORTHO05D009047 1.2e-11 75.1 193 33.2
C09p73390 Brassica napus HOM05D002509 ORTHO05D002758 1.3e-10 71.6 439 25.1
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 2.2e-10 70.9 369 24.9
SEGI_24698 Sequoiadendron giganteum HOM05D007148 ORTHO05D009047 1.4e-09 68.2 63 55.6
Ciclev10012080m.g Citrus clementina HOM05D007148 ORTHO05D009047 4.2e-09 66.6 288 26.0
Hma1.2p1_2076F.1_g313310 Hydrangea macrophylla HOM05D007148 ORTHO05D009047 7.1e-09 65.9 160 35.0
Mapoly0046s0027 Marchantia polymorpha HOM05D007148 ORTHO05D009047 4.6e-08 63.2 109 38.5
vmacro08783 Vaccinium macrocarpon HOM05D007148 ORTHO05D009047 6.0e-08 62.8 273 28.9
AUR62042066 Chenopodium quinoa HOM05D007148 ORTHO05D009047 1.0e-07 62.0 351 23.1
Pp3c9_1150 Physcomitrium patens HOM05D007148 ORTHO05D009047 1.0e-07 62.0 150 30.7
Aa31LG1G21730 Aethionema arabicum HOM05D007148 ORTHO05D009047 8.7e-07 58.9 232 29.7
Atru.chr8.1789 Acer truncatum HOM05D007148 ORTHO05D009047 3.3e-06 57.0 148 31.1


User provided reference genes

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